Dipodomys spectabilis (banner-tailed kangaroo rat): 122100314
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Entry
122100314 CDS
T07891
Symbol
Nwd1
Name
(RefSeq) NACHT domain- and WD repeat-containing protein 1 isoform X1
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
dsp04990
]
122100314 (Nwd1)
Domain-containing proteins not elsewhere classified [BR:
dsp04990
]
WD40 repeat (WDR) domain-containing proteins
Other WDR domain-containing proteins
122100314 (Nwd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
AAA_16
AAA_22
NBCH_WD40
NACHT
AAA
nSTAND1
DUF4062
Motif
Other DBs
NCBI-GeneID:
122100314
NCBI-ProteinID:
XP_042526610
LinkDB
All DBs
Position
Unknown
AA seq
1576 aa
AA seq
DB search
MDTEREALLLSAYPEVQAFCQRHGLGFEVVDLRWGVREADVSDYTMTELCLEELSRCQET
SIGPTFVALLGDRYGPCPVPGLIEEREWEALAGSLRARPRDLELVARRFQRDENAVPPTY
VLQEPDVGEARGPEEASLASVLQAGALEARRLGLLSQEQWHRYHRSVLEWELEVGVLRPG
AAARGVTVFLREIRDLDKHLLDECALLALDRLPDGCPDTGARGLLQRLKERLAEEHPEIM
QAHPLPWSRDLLNPKNKAHARYLRGLGEQFVASARLQILAGLGERGAGLGARGAPRDQAW
LFEELRVHQRRQAAEAAAPLCGRQELLARLGRRLRDGEQRPHPPLVLFGAPGVGKTALLC
ALAGGAPGLLGRKAVTALRVLGASGSSVDPGALPRSLALQLSLAFGLPPPPGPVLARRGR
LAQFLQALLHAAARRDCESLVLVLDDVDALDGLGPGRDPLPWLPARCPPRVHVVLSACSG
GRRRPRHALDALRAKIQDADAFVEVPPLAAGPGQDLVRGLLAAAGRALSPAQQAALWAWL
PDCGHPGRLRLAFEEARRWASFTVPAPLAGTAEEATHHLCARLEDAHGQLLVSHVLGYIA
ASRFGLSEAELKDVLSLDDELLCEAYRAWTPPSRRLLRFPPLLWVRLRRDLGLCLARRPA
DGGQLLTLAHRQLAEVVSVRYLSGPERAQRHSVLADFFSGAWSQGTKKLITLPLVGVPLS
LDRKVAPQPLWFSDSVANERRLQELPRHLLLAGRTRELRQDLLGNVSWLACRALSGGAEA
LLDDFDLCTQHLRCPEVGLIREAVRLSRPALELRGTEKSTLYTELLARLLFFSKSHPALV
GQLCQQAQSWLRACPHPVLVPLAGFLQPPGGPLQATLTGCHKGITAVAWSQEQRLLVLGT
HDGVVAMWDVEEECPVHFLPAHSGEVWCVRVFAQGARAVSASTDRTLRVWGLLSGQQQLS
IWDGGAANSTEPQTRSLHVDEAKQVLYLASGSKISAWALETAALLFRVLGEASDPWLCAA
WLAAPTRLLTVSRACVVSVWSAASGALQGKQRLSSVRGETPTCAAPLHKQGTVVAGFSNG
SVSLISSKGDRLLEKLPEAVGLVEVSEDGSLLAAGFGKSVRIFLADAQGFQRFLATDLRH
EDAVETAVFGPKNNLIVTASRDALIQVWSLSEQGALLGLLDGVGAPLGTLVRAGALVVGA
SRWSSTFRAWDVSRARQRGACAPFPDRTGLTAVSHNGSYVYFPGVGEKNQVTIWDLAEGE
ARGALDTSSEVRCLEVAEQTKLLFAGLVSGAVLVFPLNSTQDVLCIPPPEARKAVTCMAL
SKEEERLAVAYNNMVLVLGVGPGDPCPVVDGPTFTFYTQLPDTIATVAVLADSRVAYGMT
HGDLFLYECASSKVCPLEAHASRVSCVEVSHGGQLAVSGSEEGLLCLWDLGTCQCKLEMS
YMGSIIRGVQCVCFSQDDKYLFSAWRDGSILVWRALDGSLLTVQFVHAVVNRIIPTANGF
LAPTRQGRLIRVRFQCPAASASPQDALQNFQKAVWMVKTRRREELVAGAGSAQDPGSEAR
EKETNPNKRSQVCLLL
NT seq
4731 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgagagagaggccttgctgctcagtgcctaccccgaagtgcaagccttctgc
cagaggcatggcctgggctttgaggtggttgatctgaggtggggtgttcgggaagcagat
gtctcagactacaccatgactgaactctgcctggaggaactcagccggtgtcaggaaaca
tccatagggcccactttcgtcgccctgctgggtgaccgctatggcccctgccctgtcccg
gggctgatcgaggagcgggagtgggaggcgctggcgggctccctgcgtgcccggcctcgg
gacctggagctggtggctcgccgcttccagagggacgagaacgcagtgccgcccacctac
gtcctgcaggagccagacgtgggcgaggcccgggggcccgaggaggcctcgctggcctct
gtcctccaggccggtgcgctggaggcccggaggctgggcctcctcagccaggagcagtgg
catcgctaccatcggtcagtcctcgagtgggagctggaagttggggtgctgcggcccggg
gcggcggcacggggggtcaccgtgttcctgcgggagatccgggacctcgacaagcacctg
ctggacgagtgcgcgctcctggcgctggaccgcctgcccgacggctgcccggacacgggg
gcccggggcctcctgcagcgcctcaaggaacgcctggcggaggagcaccccgaaatcatg
caggcccaccccttgccgtggagccgggacctgctgaaccccaagaacaaggcccatgcc
cgctacctccggggcctgggcgagcagttcgtggccagcgcccgtctccagatcctggcg
gggctgggggagcggggcgcggggctgggggcgcggggggcgccgcgggaccaggcctgg
ctcttcgaggagctgcgcgtgcaccagcggcgccaggccgccgaggccgcggcgcccctg
tgcggccggcaggagctgctggcccggctggggcggcggctgcgggacggggagcagcgc
ccgcaccccccgctcgtgctcttcggggccccgggcgtggggaagaccgccttgctgtgc
gcgctggcgggcggcgcgccggggctgctgggccgcaaggcggtcaccgcgctgcgggtg
ctgggggcgtcggggagcagcgtggaccccggcgcgctgccccgctccctcgccctgcag
ctgagcctggccttcgggctgccgccgccgcccggcccggtgctggcccgccgcggccgc
ctggcgcagttcctgcaggcgctgctgcacgccgcggcccgccgggactgcgagtccctg
gtgctggtgctggacgacgtggacgcgctggacggcctgggccccggccgcgacccgctc
ccctggctgcccgcccgctgcccgccccgggtccacgtcgtgctgtccgcctgctccggg
ggccggcggcggccacggcacgcgctggacgcgctgcgggccaagatccaggacgccgac
gccttcgtggaggtgccgccgctggccgccggccccgggcaggacttggtgcgcggcctg
ctggcggccgccgggagggcgctgagccccgcgcagcaggccgcgctctgggcctggctg
ccagactgcggccaccccggccggctgaggctggccttcgaggaggcccgccgctgggcc
tccttcaccgtgcccgccccgctggccggcaccgccgaggaggccacgcaccacctgtgc
gcgcgcctggaggatgcgcacgggcagctgctggtgtcccatgtgctgggctacatcgcc
gcctcccggttcgggctgtcggaggcggaactgaaggatgtgctgtccctggacgatgag
ctgctgtgcgaggcgtaccgggcctggacgccacccagccgccggctgctgcgcttcccg
cccctgctctgggtgcggctgcggagggacctgggcctctgcctggcccggaggcccgcg
gacggcggccagctcctcacccttgcccacaggcagctggctgaggtggtgagcgtgcgc
tacctgtcagggcccgagagagcccagaggcacagcgtcctggccgatttcttttcgggt
gcctggagccagggcaccaagaagctcatcaccctgccgcttgtgggggtacccctgagc
ctggaccgcaaggtggccccgcagccgctgtggttctcggactccgtggccaacgagcgg
cggctgcaggaactgccccgacacctgctgctggcgggccgcacgcgggagctgcggcag
gacctgctggggaacgtgagctggctggcgtgccgggcgctctcggggggcgccgaggcg
ctgctggatgacttcgacctctgcacgcagcacctccgctgccccgaggtcggcctgatc
cgcgaggccgtgcggctgagccgccccgcgctggagctccgaggcaccgagaagagcacg
ctgtacacggagctcctggcgcgcctccttttcttctccaagtcccaccccgcgctggtg
gggcagctgtgccagcaggcccagagctggctccgcgcatgcccgcaccccgtgctggtg
cccctggccggcttcttgcagccccctggaggccccctgcaggccaccctcactgggtgc
cacaagggcatcaccgccgtggcttggagccaggagcagcggctgctggtgcttggcacg
cacgacggtgtggtggccatgtgggacgtggaagaggaatgcccggtccacttcctcccc
gcacactcaggcgaggtgtggtgcgtgcgggtgttcgcgcagggcgcccgcgccgtctcc
gcctccacggaccgcacgctgcgcgtgtgggggctgctgtccggccagcagcagctcagc
atctgggacggaggcgcagcaaactccaccgagccccagacccggagcctccacgtggac
gaagcaaagcaagtcctgtacttggcgtcggggtcaaagatcagcgcgtgggcgctggag
acggcggcgctgctgttccgtgtcctgggcgaggcctcggacccctggctgtgcgcggcc
tggctggcggcccccacgcggctgctgaccgtgtcccgggcctgcgtggtcagcgtgtgg
agcgcagcctcgggcgcgctccagggcaagcagcgtctgagcagcgtccggggagagacc
cccacgtgcgccgctcccctccacaagcagggcaccgtggtcgctggctttagcaacggc
tctgtctccctgatttcctcgaagggagacagattgctggagaagcttccagaagctgtg
ggcttggtagaggtgtcggaagacggatctctcctggctgcaggtttcgggaaatctgtg
cggatctttctggccgacgcccagggtttccagcgattcctggctactgacctgcgacac
gaggacgcggttgagacagctgttttcggtcctaagaataacctgattgtcactgcatca
cgggacgccctcattcaggtgtggagcctgtcggagcagggcgcgctgctgggcctcctg
gatggtgtgggggcgccgctgggcacgctggtccgggcgggggcgctggtggtcggggcc
tcgcggtggtcttccaccttcagggcctgggatgtcagccgggcccgccagcgcggggcc
tgcgcccccttcccggaccgcacggggctcacggccgtgtctcacaacggaagctacgtc
tactttcccggagtcggcgagaaaaaccaagtcaccatctgggacctggcggagggcgag
gcgcgcggcgcgctggacacgtccagtgaggtccggtgtctggaggtggccgagcaaacc
aagctcctattcgctggcctggtttcgggggccgtgctggtgttccccctcaactccacg
caggacgtcctgtgcatccctccccccgaggcccggaaggccgtcacctgcatggcactg
agcaaggaggaggagcggctggccgtggcctacaacaacatggtcctggtgctgggcgtc
gggcccggggacccctgcccggtcgtcgatggccccacgttcaccttctacacccagctc
cctgacaccatcgccactgtggccgtgctggccgactcccgcgtggcctatggcatgacc
cacggcgacctcttcctgtacgagtgtgccagttccaaggtgtgccctctggaggcccac
gccagtagagtctcgtgcgtggaggtcagccacggggggcagctggcggtgagcggctcc
gaggaaggcttgctgtgtctgtgggacttgggcacctgccagtgcaaactcgagatgagt
tacatgggctccatcatcaggggtgtccagtgcgtgtgcttctcccaagacgacaagtac
ctgttctcagcctggagggacggctcaatcctcgtgtggagagcactggatggctctctg
ctgacagtccagttcgtccacgccgtggtgaacaggatcatccccacggccaatggtttc
ctggctcccaccaggcagggccggctcatccgggtgcggttccagtgcccagcggccagt
gcctcgccgcaggatgccctgcagaacttccagaaggctgtgtggatggtgaagaccagg
aggagagaagagctggtggccggtgcgggatcagctcaggaccccggctcagaggcccgg
gagaaggaaacgaaccccaacaagcgctcacaagtgtgcctgctgctgtag
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integrated database retrieval system
