Dipodomys spectabilis (banner-tailed kangaroo rat): 122103771
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Entry
122103771 CDS
T07891
Symbol
Cop1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04115
p53 signaling pathway
dsp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122103771 (Cop1)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
122103771 (Cop1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dsp04121
]
122103771 (Cop1)
Enzymes [BR:
dsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122103771 (Cop1)
Ubiquitin system [BR:
dsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122103771 (Cop1)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
122103771 (Cop1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
WD40_like
zf-rbx1
zf-RING_10
zf_C2H2_10
zf-RING_11
Sina_RING
zf-Nse
Motif
Other DBs
NCBI-GeneID:
122103771
NCBI-ProteinID:
XP_042530349
LinkDB
All DBs
Position
Unknown
AA seq
738 aa
AA seq
DB search
MSGSRPTGSGSAGTSPGSSAASSVTSASSSLSSSPSPPSVAASAAALVSGGGAQAAGSGG
LGGPGRPVLVAAAVSGSGGGGGSGGGAVSAGLSRLSCGARPGAGVGGSGSGLGGGSGRKR
PPLAPLCNGLINSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKC
NYVVDNIDHLYPNFLVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNL
DLANVNLMLELLVQKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDI
KRVEEMSGVYSPVSEDSTVPQCEAPSPSHSSIIDSTEYSQPPGFSGSSQTKKQPWYNSTL
ASRRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLDEFQECLSKFTRYNSVRPLATLSY
ASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKI
SCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGS
DDAKVKLWSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIM
VFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGD
YIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALPDGES
NVLIAANSQGTIKVLELV
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtagtcgaccgaccgggtcgggctccgccgggacgagccccggctcctcggcg
gcctcctcggtgacttccgcctcctcgtccttatcctcgtccccgtcgcccccttccgtg
gcggcctcggcggcggcgctggtgtccggcggaggcgcccaggccgcgggctcgggcggc
ctcgggggtccggggcggcctgtgctggtggcggccgccgtgtcgggcagcggcggcggc
ggcggcagcggcggcggggcggtgtccgcgggcctgtcgcggctcagctgcggggccagg
cccggcgccggcgtaggaggcagcggctccggcctcggcggcggcagcggccggaagcga
cctccgctcgccccgctctgcaatgggctcatcaactcctacgaggacaaaagcaacgac
ttcgtctgccccatctgctttgatatgattgaggaagcatacatgacaaaatgtggccac
agcttttgctacaagtgtattcatcaaagtttggaggacaataatagatgtcccaagtgt
aactatgttgtggacaatattgaccatctctatcctaatttcttggtgaatgagctcatt
ctcaaacaaaagcaaagatttgaggaaaagaggttcaaattggaccactcagtgagtagc
accaatggccacaggtggcagatatttcaagatttgttaggaactgaccaagataacctt
gatttggctaatgtcaacctcatgttggagttacttgtgcaaaagaagaaacaactggaa
gcagaatcacatgcagcccaactacagatccttatggaattcctcaaggttgcgagaaga
aataagagagagcaactggaacagatccagaaggaactaagtgttttggaagaagatatt
aaaagagtggaagaaatgagtggcgtatactctcctgtcagtgaagatagcacagtgcct
caatgtgaagccccttctccatcacacagtagtataattgattctacagaatacagccaa
cctccaggtttcagtggcagttctcagacaaagaaacagccttggtataacagcacatta
gcctcaagacgaaaacggctcactgctcattttgaagacttagagcagtgttatttttct
acaaggatgtctcgtatatcagatgacagccgaactgcaagccagttggatgaatttcag
gaatgcctgtctaagtttacaagatataattcagtacgacctttggccacattgtcatat
gctagtgatctctataatggttccagcatagtttctagtattgaatttgatcgggattgt
gactattttgcaattgctggggttacaaaaaagattaaagtctatgagtacggcacagtc
atccaggatgcagtggatattcattatcctgagaatgaaatgacctgcaattccaaaatc
agctgtatcagttggagcagttatcataaaaacctgttagccagcagtgattatgaaggt
actgtcatcctatgggatggattcacaggacagagatcaaaagtgtatcaggaacatgag
aagaggtgttggagtgttgactttaatttgatggatcctaaacttttggcttcaggttct
gatgatgcaaaagtgaagctatggtctaccaacctagacaattcagtggcaagcattgaa
gcaaaggctaatgtgtgctgtgtgaaattcagtccctcctccagatatcatctggctttt
ggttgtgcagatcactgtgtccactactatgatcttcgtaacactaaacagccaatcatg
gtattcaagggacaccgaaaagcagtctcttatgcaaagtttgtgagtggcgaggaaatt
gtctctgcctcaacagacagccagctaaaactgtggaatgtagggaaaccatactgtcta
cgttccttcaagggacatatcaatgaaaaaaattttgtaggccttgcttccaatggagat
tatatagcttgtggaagtgagaacaactctctctatctgtactataaaggactttctaag
actttgctaacttttaagtttgatacagttaaaagtgttctggataaagacagaaaagaa
gatgatacaaatgaatttgttagtgctgtgtgctggagggcactaccagatggggagtcc
aatgtgctgattgctgctaacagtcagggtacaattaaggtgctagaattggtatga
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integrated database retrieval system
