Dipodomys spectabilis (banner-tailed kangaroo rat): 122113516
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Entry
122113516 CDS
T07891
Name
(RefSeq) nuclear envelope pore membrane protein POM 121C-like isoform X1
KO
K14316
nuclear pore complex protein Nup121
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03013
Nucleocytoplasmic transport
dsp05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122113516
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
122113516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsp03019
]
122113516
Messenger RNA biogenesis [BR:
dsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122113516
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
122113516
NCBI-ProteinID:
XP_042542426
LinkDB
All DBs
Position
Unknown
AA seq
1197 aa
AA seq
DB search
MSPAAGVGERRRPISSAGEGRGRLRGGPAGALLLGLALLGLVLCLVPAAAALAWLAVGAT
AAWWGLTREPRGPRASSARFARRPRTLLVTPPSKAAANGGVPESRSLLEGPDPAELLLMG
SYLGKPGPPPPPAPDRLGLRPPPSARSPPPGPRLHPVRSPLSTQLLGPSRRPFQRDSGSS
SNRFVITPRRRYPIQQAQYSLLGVLPTVCWNGCHKKTVLSARNSRMVCSPVTVRIAPPNS
KLMRSPVPEQVVNAALSSPTRNAPDPCAKETVLNALKERKKRAVEEEDQIFADGQENKRR
RHDSSGSGHSAFEPLVANGIPASFVPKPGSLKRGLTSQSTDDHLNKRSRTSSVSSLTSTC
TGGILSSSRNAITSSYSSSRGVSQLWKRSGPTSSPFSSPASSRSQTPERPAKKTREDVPC
HHSSSSPPLVTDTESQGERVADVATRTKQGPSPSPATPNTSGKRKRKTPLLPSRRGDQLT
LPPPPQLGYSITAEDLDMEKKASLQWFNKALEDATDNSSTSVTETPPASAQPSFTFSLPA
VAPASSAASPSASLLASPLASLPAPSANPLLESLQKMQGPPVLPAFPEPVRPAASSAPSP
PKTASPGPTPPAATFPELAPAKDTKSPLASVPELPVTTQGAPVPSPTPKSSVLGGVPSSS
LPSPVAASSSTSISSSSTTMAATTATAATATVAATTAAAMAAPAPATVASPMFKPIFLAT
PKSEGTGPSPPVLSDDSTAAQAFKPIFGSMGLPASVSSAPPFLKPTTTATTTTAAAAPAF
ASLPTATTTSSTTSSSVDSVAKPVFGFVTPSAASTTGTEPGTCSSQPFLFGATPASASSF
PTPGGPVFQFGKAPTPLTPAPSTFGQLPSSATALPASSSGSTGFSGFGSGLTTSATATAT
TSQPSLTFSTTTPTFNIPFGSGTKAALPPYPGASTQPAFGATEGQPPGTTKPALAPSFGS
AFTFGTSAAPAAVPAPTPAPAPAAFGTSVLPAFGALKGTASAFGAPASTQPAFGSTTTVF
SFGTATTQTTSTGTTSSVFGSSTPAPFTFGSSGTPAGSGGFGIGVATPSSSSGAFAFGAG
QGGTTGTSTAFSGGLSQNTLGTAGQNTSFVFNVAGTPESKPVFGGTSTPTFGQSTLAPGV
GSAGSSLSFGTSSTPTQGFTGVGPFGSATPSFSIGAGSKTPGARQRLQARRQHTRKK
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgtctccggcggccggagtcggcgagcggcggcgtcccatctcgagtgccggggagggc
cggggccggcttcgtggcgggccggccggggcgctgctgctgggtctggcgctgctcggc
ctggtgctgtgcctggtgcccgcggcggcggcgctggcctggctggcagtgggggccacc
gcggcctggtgggggctgacccgcgagccccgaggtccgcgcgcctcgtccgcgcgtttc
gcgcggcgcccgaggacgttgctcgtcacacctccttccaaggccgctgcgaacggaggc
gttccggagtcgcgaagcctactcgaaggacctgaccccgccgaactgctccttatgggc
agctacctgggcaagccgggcccaccgcccccgcccgcccccgacaggctaggcctgcgc
cccccgccgtccgctcgctctccgccgccgggcccgcgcctccaccctgtccgctccccg
ctctccacgcagctcctcgggccctccaggaggcctttccagcgggacagtgggtcctca
tccaaccgttttgtaataacacctcgcagacgctacccaatccagcaggcccagtactcc
ttgctgggagtgctgcccacagtgtgctggaatggttgtcataagaagactgtgctctct
gcacggaactcgaggatggtgtgcagcccagtgaccgtgagaattgcccctcccaacagc
aaactgatgcgttctccagtaccagagcaggtagtgaacgcagcactgtcctcaccaacc
agaaatgccccagacccatgtgcaaaggagaccgtcctgaacgccctcaaagagaggaag
aaaagagctgtggaggaagaagaccaaatctttgctgatggacaggaaaacaagagacgg
cgccatgatagcagtgggagtggacattcagcatttgaacctcttgtggccaatggcatc
ccagcctcttttgttcctaagcctggatctctgaagagaggcctcacttcccagagtaca
gatgaccacttaaataagcggtcacgcacctcttctgtgagctccctaacgagcacatgc
acagggggcatcctgagctccagccgcaacgccatcaccagctcttacagctcttcccga
ggcgtgtctcagctgtggaagaggagtggtcccacgtcatcccccttttccagcccagcc
tcctcacgctcccagacccccgaaaggccggctaagaaaacaagagaagacgtgccgtgt
catcactccagctcctcacctccactcgtgacagacacagagtcgcagggagaaagggtt
gcagatgtggccacacggacaaagcagggccccagtccctcccccgccacaccaaacacc
tctgggaagcggaaaaggaagacgccgctgctgccttccaggcggggggaccagctgacc
ttgcctccaccgcctcagcttggctattccatcactgccgaggacctggacatggagaag
aaggcatcgctgcagtggtttaacaaggccctggaggatgcaaccgataactcctccacc
tctgtcaccgagaccccgccagcatcagcccagccctcctttactttctccctgcctgcc
gtggcaccagcttcttcagcagcctccccttcagcctccctcctggcctctcccctggcc
tccctcccagccccctctgctaacccactgttggagagcttgcagaagatgcagggcccc
ccagtgctgccagccttcccagagcctgtgaggccagcggcctcttccgccccttcacct
cccaagacggccagccctggccccacaccgcctgcagccaccttccctgaactggccccg
gccaaggacaccaagtcacctctcgcctctgtccctgagctgccagtcaccacccaaggc
gcccctgtcccatctcctacccccaagtccagtgtgttgggcggggtgcccagcagctca
cttcctagccctgttgctgcgtcctcctccacctccatctcttcttcctctaccaccatg
gctgccaccacagccactgccgccactgccaccgttgccgccaccactgccgccgccatg
gctgctccagcgccagccactgtagcttctcctatgttcaagcccatttttctggccact
cctaaaagtgagggcactggcccctcgccacctgtgctctctgatgacagcacggctgcc
caggctttcaagccgatttttggtagcatggggctgccagcctccgtgtcctcagccccc
ccattcttgaaaccgaccacaactgcaaccacgaccacagcggccgccgcccctgccttt
gccagcctgcctacggctaccaccacctccagcaccaccagctcatccgtagactctgtc
gcaaagccagtgtttggcttcgtcacacccagtgcggccagcaccacgggcaccgagcct
ggcacctgtagctcacagccgtttctctttggggcaacccccgcctctgccagcagcttc
cccacacctgggggccccgtgttccagtttggcaaggctccaaccccactgaccccggca
cccagcaccttcgggcagctgccatccagtgccacagctctcccggccagcagcagtggc
tccactggcttcagcggcttcggcagcggactcaccacctcagccacagccacagccacc
actagccagcccagcctcaccttcagcaccaccacccccaccttcaacattccctttggt
tctggcaccaaggcggcactcccaccatacccaggcgctagtacccagccggcatttggg
gccactgaggggcagcctccagggaccaccaagcccgcccttgcccctagcttcggcagc
gccttcacctttgggacctctgcggccccagcggcggtgccagcacccacccctgcaccg
gcccctgcagcctttgggacttctgtgctcccagcttttggtgctctgaaaggcacagcg
tccgcctttggcgccccagccagcacacagcccgccttcggcagcaccaccaccgttttc
tcctttgggacagccaccacccagaccaccagcactgggaccaccagctctgtgtttggc
agctccaccccggccccgttcacctttgggagctcaggcaccccagctggcagtgggggc
tttgggatcggtgtggcaaccccaagctccagctctggagcctttgcttttggagctgga
cagggtgggaccacgggcacatccaccgccttcagtggtggcttgagtcagaacaccctg
ggcacggccggccagaacacatccttcgttttcaacgtggcaggcacacctgagagcaag
cctgtgtttggaggcacctctactcccacctttggccagagcacccttgctcctggagtg
ggctcagcaggcagcagcctctcctttgggacctcctcaacacccacccaaggcttcact
ggagttgggccttttggatcggcgacaccttccttttccatcggtgcgggatccaagact
ccaggggctcgacagcgactgcaggcccgaagacagcatactcgcaagaagtag
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integrated database retrieval system
