Dipodomys spectabilis (banner-tailed kangaroo rat): 122117203
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Entry
122117203 CDS
T07891
Symbol
Thbs4
Name
(RefSeq) thrombospondin-4
KO
K04659
thrombospondin 2/3/4/5
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04145
Phagosome
dsp04151
PI3K-Akt signaling pathway
dsp04510
Focal adhesion
dsp04512
ECM-receptor interaction
dsp04820
Cytoskeleton in muscle cells
dsp05144
Malaria
dsp05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
122117203 (Thbs4)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122117203 (Thbs4)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122117203 (Thbs4)
09144 Cellular community - eukaryotes
04510 Focal adhesion
122117203 (Thbs4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122117203 (Thbs4)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
122117203 (Thbs4)
09174 Infectious disease: parasitic
05144 Malaria
122117203 (Thbs4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dsp04131
]
122117203 (Thbs4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dsp04147
]
122117203 (Thbs4)
00536 Glycosaminoglycan binding proteins [BR:
dsp00536
]
122117203 (Thbs4)
Membrane trafficking [BR:
dsp04131
]
Endocytosis
Phagocytosis
Opsonins
122117203 (Thbs4)
Exosome [BR:
dsp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122117203 (Thbs4)
Exosomal proteins of colorectal cancer cells
122117203 (Thbs4)
Exosomal proteins of bladder cancer cells
122117203 (Thbs4)
Glycosaminoglycan binding proteins [BR:
dsp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
122117203 (Thbs4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_3
EGF
cEGF
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
122117203
NCBI-ProteinID:
XP_042546828
LinkDB
All DBs
Position
Unknown
AA seq
961 aa
AA seq
DB search
MLTPRGAAFLLLHLVLPPWPGAGAQAAPQVFDLLPSSSQRLNPAALQPVLTDPALNELYL
ISTFKLQTKSSATIFGLYSSSDNSKYFEFTVMGRLNKAILRYLKDDGKIYLVVFNNLQLA
DGKRHRILLRLTNLQRGTGSVELYVDCTQVDSIQNLPRAFSGLSQDLESIELRTFQRKAQ
DFLEELKLVVRGSLFQAASLQDCFLQQSEPLATTSTGDFNRQFLGQMTQLNQLLAEVKDL
LRQQVKETSFLRNTIAECQACGPLSFQSPTPNTLVPPAPPAPPTRPPRRCDSNPCFRGVR
CTDTRDGFQCGPCPEGYTGNGIVCSDVDECKYHPCYPGVRCVNLAPGFRCDACPVGFTGP
MVQGVGINYAKSNKQVCTDVDECRNGACVLNSICINTLGSYRCGPCKPGYTGDQTRGCKT
ERNCRNPELNPCSVNAQCIEERQGDVTCVCGVGWAGDGYVCGKDVDIDSYPDEELPCSAR
NCKKDNCKYVPNSGQEDADGDGIGDACDEDADGDGILNEQDNCVLTHNVDQRNSDKDIFG
DACDNCRTVLNNDQRDTDGDGNGDACDDDMDGDGIKNILDNCPKVPNRDQRDKDGDGVGD
ACDSCPDISNPNQSDVDNDLVGDSCDTNQDSDGDGHQDSTDNCPTVINSSQLDTDKDGIG
DECDDDDDNDGIPDMVPPGPDNCRLVPNPAQEDSNRDGVGDICESDFDQDHVIDRIDVCP
ENAEITLTDFRAYQTVVLDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVD
FEGTFHVNTQTDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQATPFRAVAEPGIQLKAVK
SKTGPGEHLRNSLWHTGDTSDQVRLLWKDSRNVGWKDKVSYRWFLQHRPQVGYIRVRFYE
GSELVADSGVTIDTTMRGGRLGVFCFSQENIIWSNLKYRCNDTIPEDFQEFQTQNFDRLD
N
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccccgcgtggagccgccttcctgctcctgcacctggtcctgccgccgtggccg
ggggccggcgcccaggccgccccgcaggtctttgaccttctgccatcctccagtcagagg
ctgaaccctgctgctctgcagcctgtcctgacagacccggccctgaatgaactatacttg
atctccaccttcaagctgcagactaaaagctcagccaccatctttggactctactcctca
tcggacaatagcaaatattttgaatttactgtaatgggacgcttaaataaagccatcctc
cgttacctgaaggatgatgggaagatctatttggtggttttcaacaacctgcagctggct
gatgggaagcggcacaggatcctcctgaggctgaccaatttgcagcgagggacaggctct
gtagagctctatgtggattgcacccaagtggattccattcagaatcttcccagagccttt
tctggtctctctcaggatcttgagtctattgaactgagaactttccaaaggaaggcacag
gacttcttggaagagctgaagctggtggtacggggctcactgttccaggcagccagcctg
caagattgcttcctgcagcagagtgaaccattggccaccacaagcacaggggactttaat
cgacagttcttgggtcaaatgacacaactaaaccaactgcttgcggaggtgaaagatctt
ctaagacagcaggtcaaggaaacatcatttttacgaaacactatcgctgaatgccaggcg
tgtggtcctctcagctttcagtctcccaccccaaacacactggtgcccccagcacccccg
gcacctccaactcggcctccacggcgctgtgactccaacccatgtttccgaggtgtccga
tgtaccgacactagagatggcttccagtgtgggccctgccctgagggctacacgggcaat
ggcatcgtctgctctgacgttgatgagtgtaaataccatccctgctacccaggtgtacgc
tgtgtgaacttggctcctggcttccgatgtgacgcctgcccagtgggcttcacagggccc
atggtgcagggggttgggatcaactatgctaagtcaaataagcaggtgtgcaccgatgtg
gatgagtgtcgcaatggagcatgtgttctcaattctatctgtattaacacgttgggatct
tatcgctgtgggccatgcaaacctgggtacactggtgatcagacaagaggatgcaaaaca
gaaagaaactgcagaaatccagaactgaacccttgcagtgtgaatgcgcaatgcattgaa
gagaggcagggagatgtgacatgtgtgtgtggagttggttgggctggtgatggttatgtc
tgcggaaaggatgtggacattgacagttaccctgatgaagaacttccatgctctgccagg
aactgcaaaaaagataactgcaagtatgtaccgaactccggccaggaagatgcagatgga
gatggcattggagatgcttgtgatgaggatgctgatggagatgggatcctaaatgaacag
gataattgtgtcctgacccacaatgtggaccaaaggaacagcgataaagacatctttggg
gacgcctgtgacaactgcaggactgtcctcaataacgaccagagagacactgacggggac
ggcaacggagatgcctgcgatgatgatatggatggggacggaataaaaaacattttggac
aattgccccaaagttcccaatcgggaccagcgagacaaggatggtgatggtgtgggggat
gcctgtgacagttgccctgatatcagcaacccaaaccagtctgatgtggataatgatctg
gttggggactcctgtgacactaatcaggacagtgatggagatggccaccaggacagcaca
gacaactgccccaccgtcattaacagctcccaactcgacactgataaggatggaattggt
gatgagtgtgatgacgatgatgacaatgatggcatcccagatatggtgccccctggccca
gacaattgccggctggtccccaacccagctcaggaggatagcaacagggatggggtggga
gacatctgtgagagtgacttcgaccaggatcatgtcattgatcggattgatgtctgcccg
gagaatgccgagatcaccctgacagacttccgggcctaccagaccgtagtcctggacccc
gaaggggatgcccagatcgaccccaactgggtggtcctgaaccagggtatggagatcgtg
cagaccatgaacagtgatcctggcctggcagtggggtacactgcgtttaatggtgttgac
tttgaagggaccttccacgtaaatactcagacagatgatgactatgcaggctttatcttt
ggttaccaagatagctccagcttctacgtggtcatgtggaagcagacagagcagacatac
tggcaagccacaccgttccgagctgttgcggagcctggcattcagctcaaggcagtgaag
tctaagacaggccccggggagcatctccggaactccctgtggcacacaggggacaccagt
gaccaagtccggctgctgtggaaggactccaggaacgtgggctggaaagacaaggtgtcc
taccgctggttcctgcagcacaggccccaagtgggctacatcagagtgcgattttatgaa
ggctctgagttggtggctgattctggggtcacaatagacaccaccatgcgtggaggccga
cttggcgttttctgcttctctcaagaaaacatcatctggtccaacctcaagtatcgctgc
aatgacaccatcccagaggacttccaggagtttcaaacccagaatttcgatcgcttggat
aattaa
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