Dipodomys spectabilis (banner-tailed kangaroo rat): 122117847
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Entry
122117847 CDS
T07891
Symbol
Usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dsp01002
]
122117847 (Usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dsp04121
]
122117847 (Usp47)
Enzymes [BR:
dsp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122117847 (Usp47)
Peptidases and inhibitors [BR:
dsp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122117847 (Usp47)
Ubiquitin system [BR:
dsp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122117847 (Usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
ubiquitin
Dockerin_1
Motif
Other DBs
NCBI-GeneID:
122117847
NCBI-ProteinID:
XP_042547652
LinkDB
All DBs
Position
Unknown
AA seq
1375 aa
AA seq
DB search
MVPGEENQLVPKEDVFWRCRQNIFDEMKKKFLQIENAAEEPRVLCIIQDTTNSKTVNERI
TLNLPASTPVRKLFEDVANKVGYINGTFDLAWGNGINTADTVPLDHTSDKSLLDANFEPG
KKNYLHLTDKDGEQPQILLEDSSNVDDSVHDRFVGPLPREGSVGSSSDYVSQSYSYSSIL
NKSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLF
VLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINEL
YQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPN
QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSTF
IDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLESNSGTEKISKPGL
EKNSLIYELFSVMVHSGSAAGGHYYACIKSFNDEQWYSFNDQHVSRITQEDIKKTHGGSS
GSRGYYSSAFASSTNAYMLIYRLKDPTRNAKFLEVDEYPEHIKNLVQRERELEEQEKRQR
EIERNTCKIKLFCLHPVKQVMMENKLEVHKDKTLKEAVEIAYKMMDLEEVIPLDCCRLVK
YDEFHDYLERSYEGEEDTPMGLLLGGVKSTYMFDLLLETRKPDQVFQSYKPGEVMVKVHA
VDLKAETVDAPITVRAYLNQTVSEFKQLISKVVHLPVETMRIVLERCYNDLRLLGVPSKT
LKAEGFFRSNKVFVESSETLDYQVAFTDSHLWKLLDRHANTIRLFVLLPEQSPGSYSKRT
AYQKAGGDSGNVDDDCERVKGPVGSLKSVEAILEESTEKLKSLSLQQQQDGDNGDSSKST
ETSDFENIESPLNERDSSTSVDNRELEQHIQTSDPENFQSEERSDSDVNNDRSTSSVDSD
ILSSSHSSDTLCNADSAQIPLANGLDSHSITSSRRTKANEGKKETWDTAEEDSGTDSEYD
ESGKSRGEMQYMYFKADPYAADEGSGEGHKWLMVHVDKRITLAAFKQHLEPFVGVLSSHF
KVFRVYASNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEQEPCKF
LLDAVFAKGMTVRQSKEELVPQLREQCGLELSIDRFRLRKKTWKNPGTVFLDYHIYEEDI
NISSNWEVFLEVLDGIEKMKSMSQLALLSRRWRPSEMKLDPFQEVVLESSSVDELREKLT
EISGIPLEDLEFAKGRGTFPCDISVLDIHQDLDWNPKVSTLNVWPLYICDDGAVIFYRDK
TEEVMELTDEQRNELMKKESSRLQKTGHRVTYSPRKEKALKIYLDGAPNKDLTQD
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccggcgaggagaaccagctcgtcccgaaagaggatgtgttttggagatgcaga
caaaatatctttgatgaaatgaagaagaaatttttacagatagaaaatgctgctgaagaa
cctagagtcttatgtataatacaagatactacgaactcaaagacagtgaatgaacggatc
actttaaatttaccagcatctactccagtcagaaagctctttgaagatgtggccaacaaa
gtaggctacataaatggaacctttgatttggcatggggaaatggaatcaacactgctgat
acggtaccactggatcataccagtgacaagtctctcctggacgctaattttgagccagga
aagaagaactatctgcatttgacagataaagatggtgaacaacctcaaatactactggag
gactccagtaatgtggatgacagtgttcatgacaggtttgtaggtccacttccaagagaa
ggttctgtgggctccagcagtgattatgtcagccaaagctactcctattcatcaattttg
aacaaatcagaaactggttatgtgggattagtaaaccaggcaatgacttgttatttgaat
agccttttgcaaacactttttatgactcctgaatttaggaatgcattatataagtgggaa
tttgaagaatctgaagaagatccagtgactagtattccataccaacttcaaaggcttttt
gttttgttacaaaccagcaaaaagagagcaattgaaaccacggatgttacaaggagcttt
ggatgggatagtagtgaggcttggcaacagcatgatgtacaagaactgtgccgagtcatg
tttgatgctttggaacagaaatggaagcaaacagagcaggctgatctcataaatgagctg
tatcaaggcaagctaaaggactatgtgagatgtctggaatgtggatatgagggctggaga
atcgatacctatcttgatataccattggtcatccgaccttacgggtccagtcaagcattt
gctagtgtggaagaagcattacatgcatttattcagccagagattctagatggcccaaat
cagtatttttgtgaacggtgtaagaaaaagtgtgatgctcgaaagggccttcggtttttg
cattttccttatctactcaccttacagttgaaaagatttgattttgattatacaaccatg
cacaggattaagttgaatgatcgaatgacatttcctgaggagctagatatgagtacattt
attgatgttgaagatgagaaatctcctcagactgaaagttgcactgatagtggagctgaa
aatgaaggtagttgtcatagtgatcagatgagcaatgatttctccaatgatgatggtgta
gatgaaggaatctgccttgagagcaatagtggaacagaaaagatttctaaacctggactt
gaaaagaactccttgatctatgagctcttctctgttatggttcattcggggagtgctgct
ggtggtcattattatgcctgcataaagtcatttaatgacgaacagtggtatagcttcaat
gatcaacatgtcagcaggataacacaagaggacattaagaaaacacatggtggatcatca
ggaagcagaggatattattccagtgcttttgcaagctctacgaatgcgtatatgctgata
tacagactgaaggatccaacacgaaatgcaaaatttctggaagtggatgaatatccagaa
catataaagaatttggtgcagagagagagagaattggaagaacaagaaaagaggcaacgg
gaaattgagcgtaatacttgcaagataaaattattctgtttgcatcccgtgaagcaagta
atgatggaaaataaattggaggttcacaaggataaaacattaaaagaagcagtagaaatc
gcttataagatgatggatttagaagaggtaatacctttggattgttgtcgccttgttaaa
tatgatgagttccatgattatctagaacgctcatatgaaggagaagaagataccccaatg
ggacttctcctaggtggagtcaagtcaacatatatgtttgatcttctgttagagacaaga
aagcctgatcaagtttttcagtcttacaaacctggagaagtgatggtgaaagttcatgct
gttgatctgaaggcagagactgtagatgctcctataactgttcgggcttacttaaatcag
acagtttctgagttcaaacaactgatttcaaaggttgttcatttacctgttgaaacaatg
agaatagtgctggaacgctgctataatgatttacgtcttcttggtgtgcccagtaaaacc
ctgaaagctgaaggtttctttagaagtaacaaggtatttgttgaaagttctgagaccttg
gattaccaagtggcctttacagattctcatttatggaaactcctggatcgacatgcaaat
acaatcaggttatttgttttgctacctgaacaatctccaggatcatactctaaaaggaca
gcataccagaaagctggaggggattctggtaatgtggatgatgactgtgaaagagtgaaa
ggacctgtaggaagcttaaagtctgtggaagctattctagaagaaagcactgaaaaactc
aaaagcttgtcgctgcagcagcaacaggatggagacaatggggacagcagcaaaagcact
gagacaagtgactttgagaacattgaatcacctctcaatgagagggactcttcaacatct
gtggataacagagaactcgagcagcacattcagacttctgacccagaaaattttcaatct
gaagaacggtcagactcagatgtgaataatgacaggagtacaagttcagtggacagtgat
atccttagctccagccatagcagtgatactttgtgcaatgcagatagcgctcagatccct
ttggctaatggtcttgattctcacagtatcacaagtagtagaagaactaaagcaaatgaa
ggaaaaaaggagacatgggatacagcagaagaagactctggaactgatagtgaatatgat
gagagtggcaagagtaggggagaaatgcagtacatgtatttcaaagcagacccttatgct
gcagacgaaggttctggggaaggacacaaatggttgatggtgcatgttgataaaagaatt
actctggcagctttcaagcaacatttagagccctttgttggagttttgtcctctcacttc
aaggtctttcgagtgtatgccagcaaccaggagtttgagagcgtccgactgaatgaaacg
ctttcatcattttcagatgacaataagatcacaattagactggggagagcacttaaaaaa
ggagaatacagagttaaagtgtaccagcttttagtcaatgaacaagagccatgcaagttt
ctgctagatgctgtttttgctaaaggaatgactgtacggcaatcaaaagaggaattagtt
cctcaactcagggagcaatgtggcttagagctcagtattgacaggtttcgtctaagaaaa
aaaacatggaagaatcctggcactgtctttttggattatcatatttatgaagaagatatt
aatatttccagcaactgggaagttttccttgaagttcttgatggaatagagaagatgaag
tccatgtcacagcttgcccttttatcacgacggtggaggccttcagaaatgaagttggat
cccttccaggaggttgtgttggaaagcagtagtgttgatgaattgcgagagaagctgact
gaaatcagtggaatccctctggaagatctagaatttgccaagggtagaggaacttttcct
tgtgatatttctgtccttgatattcaccaggatttggactggaatcctaaagtttctacc
ctgaatgtctggcctctttatatctgtgatgatggtgcagtcatattttacagagataaa
acagaagaagtaatggagttgacagatgagcaacgaaatgaactgatgaaaaaagaaagc
agtcgactccagaagactggacatcgtgtgacatactcacctcgaaaagagaaagcacta
aaaatatatctggatggagcgccaaataaagacctgactcaagactga
DBGET
integrated database retrieval system
