Dipodomys spectabilis (banner-tailed kangaroo rat): 122118016
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Entry
122118016 CDS
T07891
Name
(RefSeq) protocadherin gamma-B2-like
KO
K16496
protocadherin gamma subfamily B
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dsp04515
]
122118016
Cell adhesion molecules [BR:
dsp04515
]
Cadherins
Protocadherins
122118016
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
122118016
NCBI-ProteinID:
XP_042547805
LinkDB
All DBs
Position
Unknown
AA seq
818 aa
AA seq
DB search
MWPSAGRSSWALWLQVPLPFLLSLFCRALPDPIRYSIPEELAQNSLVGNLAKDLELGEDL
APRKLRVSAEKEYFTVNPESGDLLVSDRIDREQICGKQLLCTLDFDIIAENPLNIFHVAV
VIQDINDNTPIFKQNKSDLKIGESTKPGKTFPLEPAVDSDSGANSLQKYHLNNNEYFDVA
EKQAPDGHKYPELILKQSLDREEHNFHQLVLTAMDGGVPPQTGTTEIRIQVTDANDNPPV
FSQDVYKVTLRENVPPGFSVLQVKATDKDEGINAEITYSFHSVDEQVKQLFNLDERTGEI
KTEGNLDFETAHRYSIGIEAKDPGDLASHCSIQVDILDENDCAPEVIVTSVFTPLPEDSP
PGTVVALIKTRDRDSGENGEVNCQVLGNAQFTLKSSSNNYYKLMTARPLDREEIPEYNIT
IAATDRGKPPLSSSITLTLDVSDINDNAPVFHQASYVVHVAENNPPGASIAQVSASDPDL
GPNGQVSYSILASDLEPGALSSYVSVSAHSGVVFAQRAFDHEQLRSFQLTVQARDQGSPP
LRANASLRVLVGDRNDNAPRVLYPALEPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHN
AWLSYHVLQASDPGLFSLGLRTGEVRTARVLGDRDAARQRLVVAVRDGGQPPLSATATLH
LIFADSLQEVLPDLRDDPSPSDPQTELQFYLVVALALISVLFLLAVILAIALRLKHSSGP
WGCFQPALNSKSGPGVLSSYSAGTLPYSYNVCVASQSAKTEFNFLNVSPAPELAPAQDLL
CDDSSMAVDVNNEDLKLSYDASFSSQLLMFQSSYMLIK
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgtggccaagcgcgggaagaagcagctgggcactgtggctgcaggtacccttgcccttc
cttctgtctttgttctgccgggctctcccggacccgatccgctactccattccggaggag
ctggctcagaactcgctggtgggaaacctcgccaaggacctggagctgggtgaggacttg
gcgccccggaagctgagagttagtgctgagaaggaatacttcactgttaacccagagagc
ggggatttacttgtaagtgacagaatagacagagagcagatttgcgggaagcagcttctg
tgtactctggatttcgatattatcgctgaaaacccattaaatattttccatgtagcagta
gtcattcaggatataaatgacaatactccaatattcaaacagaataagagtgatttaaaa
attggagaatccaccaagccgggtaaaacatttccactggaaccagctgtggattcagac
tctggtgctaactcgctgcagaaataccaccttaataacaacgagtactttgatgtggca
gaaaaacaggctccagatgggcataaatatccagagttgattctgaaacaatctctagac
agagaagaacataattttcaccaattggtcctcacagctatggatggaggggttccacct
caaactggcaccaccgagattcgaatccaagtcactgatgccaatgataaccctccagta
ttcagccaggatgtgtacaaagtcaccttgagagagaatgtgcccccaggcttctcagtg
ctgcaagtgaaggccaccgacaaagatgagggcatcaatgcggaaatcacctactccttt
catagtgtggatgaacaagtgaaacagcttttcaacttagatgaaagaacaggagaaatc
aagactgagggtaatctggattttgaaactgctcatcgttactctataggtatagaagca
aaagatcctggcgatctagcatctcattgcagtatccaagtcgacattctggacgagaac
gactgcgcacctgaagtgattgtgacttcagtgtttactcctctaccagaagattcgcca
ccaggaacagtagtcgccttgatcaaaacgagagacagggactctggagaaaacggagaa
gtgaactgccaagtcttgggaaatgcacagtttacattgaaatcttcctccaacaactat
tacaaactaatgacagcccggcctctagacagggaggagataccagaatacaacatcacc
attgcagccactgacaggggcaaaccgcccctctcctccagcataaccctcactctggat
gtatctgacatcaacgacaatgcacctgttttccaccaggcctcctacgtggtccacgtg
gctgagaacaaccctcccggagcttccatcgcccaagtcagcgcctccgacccagacctg
gggcccaatggccaagtgtcctactccatcctggccagcgacctggagccaggcgcgctg
tcgtcctacgtgtcggtgagcgcgcacagcggggtggtgttcgcccagcgcgccttcgac
cacgagcagctgcgctccttccagctcactgtgcaggcgcgcgaccagggctcgcccccg
ctgcgcgccaacgccagcctgcgcgtgctggtgggcgaccgcaacgacaacgcgccgcgc
gtgctctaccccgcgctggagcccgacggttcggcgctcttcgacatggtgccgcgcgcc
gccgagcccggttacctggtcaccaaggtggtggcggtggacgccgactctggacacaat
gcctggctgtcctaccacgtgctgcaggccagcgatcccggcctcttcagcctggggctg
cgcaccggcgaggtccgcaccgctcgcgtcctgggggacagggatgcggcccgccagcgc
ctggtggtggctgtgcgcgatggtggacagccgcccctctcggccacagccactctacac
ctcatcttcgcagatagcctgcaagaagtgttgccagacctgcgtgatgacccttcgccc
tcggaccctcagacagaactacagttttacctggtggtggccttggccttgatctctgta
ctctttcttctcgctgtgattctggccatcgccctgcgtctgaagcactcctctggtccc
tggggctgctttcagcctgctctcaactccaagtctggccctggggttctctccagttac
agtgcgggaaccttgccctattcctacaacgtgtgtgttgcctcacaatcagccaagacg
gagtttaattttctcaacgtgtccccggcccccgaattggctcccgctcaggacctcctc
tgtgatgattcttctatggctgtagacgtcaataatgaagatcttaaactctcatatgat
gcgtctttttcctctcagctccttatgtttcagtcatcttacatgctaattaagtga
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