Dipodomys spectabilis (banner-tailed kangaroo rat): 122120180
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Entry
122120180 CDS
T07891
Symbol
Samhd1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03250
Viral life cycle - HIV-1
dsp04623
Cytosolic DNA-sensing pathway
dsp05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122120180 (Samhd1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
122120180 (Samhd1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
122120180 (Samhd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsp03400
]
122120180 (Samhd1)
DNA repair and recombination proteins [BR:
dsp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
122120180 (Samhd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_2
HD
SAM_1
HD_assoc_2
PDEase_I
SAM_Ste50p
Motif
Other DBs
NCBI-GeneID:
122120180
NCBI-ProteinID:
XP_042550225
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MRRTDCEQPPKRPRCDGSPRTPPNTPPAATNCSPGPKLHPDHRTWDPEQVCSFLERSGFK
EPGLLRNIRENKITGSILPFLDESLFENLGVSSLEERKKLLHYIQQLSQTHMETVKVIND
PIHGHIEFHPLLIRIIDTPQFQRLRYIKQLGGGYYVFPGASHNRFEHSLGVGYLAGCLVR
TLCEKQPELQITERDMLCVQIAGLCHDLGHGPFSHMFDGRFIPLARPEVKWTHEQGSVHM
FEHLINSNGLKDVMKHYGLVPEEDICFIKEQITGILDSPIKGSLWQYKGRPKQKSFLYEI
VANKRNGIDVDKWDYFARDCHHLGIQNNFDYKRFLKFVRVCEVDDEKHICTREKEVGNLY
DMFHTRNCLHRRAYQHKVGNIIDTMITDAFLKADPYIEIEGSEGKKYHISTAIDDMEAFT
KLTDNVFLEILYSSDPRLSAAREILKNIECRNLYKYVGETQPGDKEKIKRKEYEHLPAEV
ACAKPNEVLLEVELKAEDFIVDVINMDYGMKDKNPIDHVHFYGKRDSQTAIKISKKQVSR
FLPETFAEQLIRVYCKKTDEKSLFAATQQFVQWCKDRDFTKPPDGDIVAPLITPHKKEWC
YQTSETHRKKLNFQDG
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgcggagaacggactgcgagcagcccccaaagcggccccggtgcgatggcagccccaga
acccctccgaatactcctcccgcggcgactaactgttcgccgggacccaaactccacccc
gaccatcggacctgggacccggagcaggtgtgctccttcttggagcgcagcggcttcaag
gaaccgggactgctgagaaacatccgagaaaataaaatcacaggttcgatcctgcccttt
ctcgatgagtctctttttgaaaatcttggagtaagttccttggaggagaggaagaaactg
cttcattatatccaacaattgagtcaaacccacatggagacagtgaaggtgattaatgat
cctatccatggccatattgagttccaccctctccttatccgaatcattgacactcctcag
ttccagcgacttcggtatattaagcagttgggaggtggttactatgtattcccaggagct
tcgcacaatcggtttgaacatagtttaggggttgggtacctcgccggatgtctagttcgc
acactgtgtgaaaaacaaccagagctgcagataactgagcgggatatgctctgtgttcag
attgcgggactttgccatgacctgggtcatggtccattttctcatatgtttgatggaaga
tttatcccgctggctcgcccagaggtgaagtggacgcatgaacagggctcggttcacatg
tttgagcatctgattaattctaatggactcaaagatgtcatgaaacattacggtcttgtc
cctgaagaagatatttgcttcatcaaggaacaaattaccggaatacttgactcaccaatc
aaaggatcattgtggcagtacaaaggacgtcctaaacagaaaagtttcctgtatgaaatc
gtggctaataaaagaaatggcattgatgtggacaaatgggattattttgccagggactgt
catcatcttggaatccaaaacaactttgattacaaacgctttcttaagtttgtccgagtc
tgtgaggtggacgatgagaagcatatttgtactagagaaaaggaggttggaaatctgtat
gacatgttccacacacgcaactgtttacaccgaagagcttatcagcacaaagtgggcaac
atcatcgatacaatgattacagatgccttcctcaaagcagacccttacatcgaaattgaa
ggttctgaagggaaaaagtatcacatttccacagcaatcgatgacatggaggccttcacc
aagctgacagataatgttttcctggagattttatactcttctgatcccagattgagtgct
gcacgagagattttgaaaaatatcgaatgccgtaatttatacaaatatgtaggcgagacc
cagcccggggacaaagaaaagatcaaaaggaaagagtacgaacatcttccagcagaggtt
gcctgtgcaaaacctaatgaagtgctcctggaggtcgagctgaaggcagaagacttcata
gtggatgttatcaacatggactatggaatgaaagacaagaatccaattgatcatgttcat
ttctatggcaagagggactcccaaacagcaatcaagatttctaaaaagcaggtttcacgc
ttcctaccagagacatttgcagaacagctgatccgtgtgtactgtaagaagacagatgaa
aagagtctgtttgctgctacacaacagtttgtccagtggtgcaaagaccgagacttcacc
aagccaccggatggtgatatcgtagccccactcataacacctcacaaaaaggagtggtgc
taccagacttcagaaactcacagaaaaaagcttaactttcaagatggctga
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