Dipodomys spectabilis (banner-tailed kangaroo rat): 122120185
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Entry
122120185 CDS
T07891
Symbol
Chd6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dsp03036
]
122120185 (Chd6)
Chromosome and associated proteins [BR:
dsp03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122120185 (Chd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
122120185
NCBI-ProteinID:
XP_042550237
LinkDB
All DBs
Position
Unknown
AA seq
2713 aa
AA seq
DB search
MKMKIQKKEKQLSNLKVFNHSPMSDASVNFDDKSPSPFDCSTDQEEKIEDLASHCLSQKD
LYTAEEDTLFSRKMTSHNGMEDNGGRGTGVKKKRKKKEPGEQEGTAKGSKDREPKPKRKR
EPKEPKEPRKTKEPKKAKEPKELKQKDGTKKSRKPREASGTKEAKEKRSCSDSSTRTKSK
KASREQGPTPVERKKKGKRKSETTLESLELDQGLRNSSLRSTEESTESADSQKRRSGRQV
KRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASKT
VQEVHPGEPPFDLELFYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIF
TEPDEDLFNPDYVEVDRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAK
VKEFESLQVLPEIKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNC
ILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHGS
QISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR
LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL
KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL
TKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDASDFQLQAMIQAA
GKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAI
DRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAV
KVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGAYG
ALMDEEDEGSKFCEEDIDQILQRRTHTITIQSEGKGSTFAKASFVASGNRTDISLDDPNF
WQKWAKIAELDTEAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTRS
RRLSDKARRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVYCV
KHYKGDEKIKSFIWELITPSKDGQAQTLQNHSGLSAPVPRGRKGKKTKNQLLLPELKNAD
WLATCNPEVVLHDDGYKKHLKQHCNKVLLRVRMLYYLKAEILGEAADKAFEGTPARELDV
PLPDIDYVEIPVDWWDAEADKSLLIGVFKHGYERYNAMRADPALCFLDKVGMPDEKSLSA
EQGVTDGTSDIPERGSPDKEDNAEDKLDSLQKQTESPGDGGGDGIFGEKKDDSRAAQDGS
DPDKSPWPVSSALTARLRRLVTIYQRCNRKELCRPEILGPGNQGYWVQEEMFRRTSEMDL
ISKEAQKRWTRREQADFYRTVSSFGVIYDQEKKIFDWTQFRIISRLDKKSDESLEHYFYS
FVAMCRNVCRLPAWKEDGTPDATIYVEPITEERAAKTLYRIELLRKVREQVLRCPQLHER
LQLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQHKRT
DTQAPGSLCCLYQNNSKLYESLTYTQMSRTSESLESEPENAVKIESRDDHLGLPGGSLPQ
VTCESFLPNAQDVISINHDESLLPESLEKMMYGKKGLSRDPGSFQESPSTNTESRKDAIT
ISASRDGSCQRGGHKAEIDSASSLMESLEAGVAQMNIKNGKHLLISLSKDGEPCYSEAGQ
RPESAGQLEDKCLASPAVDAESESGFVELCSLSVCDSKRNLSSDQQLIDLLESKHLESKL
ILSQNQSDEEEDEEENEEETLAVVTRTRERPDVLHLTEPTPVIPRGKNRAFHLDEGKKGS
LEVVSQTPGPQRTFPPIACQCHCKHMERWARGLGSEEFEVEKPKAYNPDLFRSRANSTTV
ECEPTAVPSEPFKVKLLKDPWKESTEGKKGFPTYTSEGSEPKSEDMDFENKDDYDRDGTC
PNQDYPGKYSEEESKSSASGIADLGDDTQETRAPTIAQLLQEKTLYSFSEWPKDRVIINR
LDNICHVVLKGKWPPSQQYEPSGTPPTPILASHAGSGNSFSEPETAEHSFSNGAVLAAQL
QQESFVAPVFTKGEQKHRRPYEFEVERDSKGRSLEQFSATHGHPPIVLNGWHGESAIDLS
CSSEGSPGATSPFPVSASTPKIGAISSLQGTLGMDLSGILQAGLIHPVTGQIVNGSLRRD
DAATRRRRGRRKPVEGGMDLIFLKEQTLQAGILEVHEDPGQATLSTTHPEGPGPATSAPE
PPGTASSQAEKAIPSKSLLDWLRQQADYSLDVPGFGASFSDKPKQRRPRCKEPGKLDVSS
LSGEERVPAVPKEPGLRGFLPENKFNHTLAEPVLRDAGSRRRGRRPRTDLLKAPTIVADS
PSGMGPLFMNGLIAGMDLVGLQNVRNMPGIPLTGLVGFPAGFATMPTGEEVKSTLSMLPM
MLPGVAAVPQMFGVGGLLNTPMATTCTSTAPASLSSTAKSGTAGTEKTAEDRPSSHDVKT
DSLAEDKPGPSPFSDQSEPAITTSSPVAFNPFLIPGVSPGLIYPSMFLSPGMGMALPAMQ
QARHSEIIGLESQKRKKKKTKGDSPNPNPEPAPGCEREPGSDQNCTEASVPLPPEREHVA
QAGEGVLKDSGTN
NT seq
8142 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgaaaatacagaagaaggagaagcagttgtcaaatttaaaagttttcaatcac
tccccaatgtctgatgcctctgtcaattttgatgacaaatccccatcaccgtttgactgc
agcactgaccaggaagagaaaattgaagatcttgccagtcactgtctgtcccagaaagac
ctatacactgctgaagaggatacccttttttctaggaaaatgacatcccataatgggatg
gaagacaatgggggtagaggtactggggtaaagaagaaacggaagaaaaaggagccagga
gaacaagagggtacagcaaagggcagcaaggacagggagcccaagccaaagaggaaacga
gagcccaaagagccaaaggaacccaggaagaccaaggaaccgaagaaggccaaggagccc
aaggagctgaagcagaaagacggaactaagaagtcccggaagcctcgggaggcctcaggt
accaaggaggccaaagagaagaggagctgctcggactcttcaaccaggacgaagtctaag
aaggccagcagggagcaaggaccaaccccagtggagagaaagaagaaaggaaaaaggaaa
agtgaaaccacattggagagtttagagctggaccagggcctgcggaactcgtccctgcgg
agtactgaggagtccactgagtctgcagacagccagaagcgacgctcaggaaggcaagtg
aagcgcagaaaatacaacgaggacctagacttcaaagtggtggatgatgatggggaaaca
atcgcggttcttggagctggccgaacatctgcactctcggcttctacactggcatggcag
gctgaggagcctccagaagatgatgcaaacatcatcgagaagatcctggcatccaagacc
gtccaggaggttcaccctggagagcctccattcgacctagagctattctacgttaagtat
agaaatttttcctacttacattgtaaatgggccacaatggaagagctggaaaaggatcct
cgcatcgcacagaagatcaagcgctttaggaataagcaagcccagatgaagcacattttt
acagagcctgatgaagacttgttcaatccagattatgtggaagtggatcgtatcctggag
gtggcacataccaaggatgcagaaacaggggaggaagtgacacattacctagtgaagtgg
tgttccctgccatatgaagagagcacatgggagttagaggaagatgtggatcctgcaaaa
gttaaagaatttgaatctcttcaagttcttcctgaaattaagcatgtggagcggcctgct
tcagactcctggcagaagctcgagaagtctcgggaatataagaacagtaaccagctccgg
gaataccaactggagggaatgaactggcttctttttaattggtataacagaaaaaactgt
attttggctgatgagatgggcctagggaaaaccatccagtccatcacgttcctttcagaa
atattcctcaggggaatccatggccctttcctcatcattgcccctctctcaaccatcact
aactgggagcgggaattccggacatggactgagatgaatgccattgtgtaccacggcagt
cagatcagcaggcagatgatccagcagtatgaaatggtgtacagagatgcacagggaaat
cccctttcaggagtcttcaagttccatgtcgtcattacaacgtttgagatgatcctggca
gattgcccagaactgaagaagattcactggagctgtgtgataattgatgaggctcacagg
ttgaagaataggaactgcaaacttctagagggactgaagctcatggcgctggaacataaa
gtgctgctcactggaacacccttgcagaactcggtggaagaactctttagtttgctgaat
tttctggagccatcacagtttccttcagagactgctttcttggaggagtttggagatctg
aaaacagaagaacaggtaaagaaactgcagtctatcctaaaaccaatgatgcttcggcgc
ctgaaagatgatgtggaaaagaacctggctcccaaacaagagacaatcattgaagtagaa
ctgaccaatattcagaaaaagtactaccgtgccatcctggagaaaaacttttccttcctg
acaaagggagcaaatcagcataacatgcccaacctcatcaataccatgatggagctgaga
aagtgctgcaaccatccttacctgatcaatggggcagaggaaaaaattctagaagatttc
cgaaaaacccacagccctgatgcctctgactttcagctgcaggccatgatccaggcagca
gggaagctggtgctgatagataaactgctccctaagctgatcgcaggtggccacaaagtg
ctcatcttctcccaaatggtgcgctgccttgacatcttggaagattatctcatccagagg
agatacacctatgagcgaattgatgggcgagtacggggaaacctgcgccaggcagccatc
gaccggttctgtaagccagactcagaccgctttgtctttcttctgtgtaccagagcggga
ggcctggggattaatctcacggctgctgatacctgcatcatatttgattctgactggaac
ccacaaaatgacttgcaggcccaggctcgatgtcaccgcatcggccagagcaaggccgtg
aaggtgtatcgccttatcacccggaactcctacgagcgggaaatgtttgacaaggccagc
ctgaagctgggcctggacaaggccgttcttcaggacatcaaccgaaagggcagcaccaat
ggagtacagcagctctcaaaaatggaggtggaggacttactccggaaaggtgcttatgga
gccttgatggatgaggaggacgaaggttcaaagttctgtgaagaagacatagatcagatc
ctgcagagaagaacacacaccatcaccatccagtctgaggggaaagggtccacttttgcc
aaggccagttttgtggcttcaggaaacagaactgatatttccttagatgatcctaacttt
tggcagaaatgggctaaaatagctgaattagacactgaagcaaagaatgagaaggaaagc
ttagtgatcgaccgacctcgcgtgagaaaacagaccaaacactacaactcatttgaagag
gatgagctcatggaattttcagagttggacagtgactcagatgaaaggcccacgagatct
aggcgcctcagtgacaaagccaggcgctacctccgagccgagtgcttccgggtggagaaa
aacctgctcatctttggctggggccggtggaaggacatcctgactcatgggcgattcaag
tggcatctgaatgagaaggacatggagatgatttgccgggccctgctggtgtactgtgtc
aagcattataagggggatgagaaaatcaagagtttcatttgggagctgatcaccccttcc
aaagatgggcaggcccagaccctccagaaccactcagggttgtctgccccggttcccaga
gggaggaaagggaagaagacaaagaaccaactactgctcccagaattaaagaatgcggac
tggctagccacctgtaaccctgaggtggtcttacatgatgatggctataagaaacatctc
aaacagcactgcaacaaagtcctcttgagagtccggatgctgtactacctaaaagctgaa
atactgggagaagcagctgataaagcatttgagggaactcctgccagggagctggatgta
cctctgcctgacatagactatgtggagatcccagtggattggtgggatgctgaggctgat
aagtcccttctcattggtgtgttcaagcatggttatgagaggtataatgccatgcgagca
gacccagcactctgcttcctggataaagttgggatgccagatgagaagtctctttctgca
gagcagggcgtcacagatggaacctcagatattcctgaaagaggcagccccgataaagaa
gacaatgctgaggacaaattagatagcctccagaagcaaacggagagtcctggtgatgga
ggtggtgatggcatttttggtgaaaaaaaggatgacagccgggcagcccaggatggctct
gacccagacaaatcaccgtggccagtctcatctgctcttacggctcgtctccggcgtctg
gtcactatttaccagcgttgcaaccgcaaggaactctgcagacctgaaatcctgggacca
ggtaaccaaggatactgggttcaagaggagatgtttaggagaacatcagaaatggatctc
atcagcaaagaagcccagaagaggtggaccaggagagaacaagcagacttctatagaaca
gtgtcttcctttggagtcatttatgatcaagaaaagaaaatcttcgactggacacagttc
cgcatcatttcccgtttagacaagaagtcagatgagagcctagaacattatttttatagt
tttgtggccatgtgccggaatgtgtgtcgtctgcccgcatggaaagaggatggcactcct
gatgctaccatctatgttgaacccatcactgaggagcgggctgcaaaaactctgtaccgc
attgagctgttacggaaggtccgagagcaggtgctcaggtgtcctcagctgcatgagcgt
ctgcagctctgcaggcccagtctctacctcccagtctggtgggagtgtggaaagcatgac
cgagacctgctcattggcactgccaaacacgggctcaaccgcaccgactattacatcatg
aatgacccccagctgtccttcctggatgcttacagaaactatgcccagcataaaaggact
gacacccaggcaccagggagtctctgttgcctttaccagaacaactccaaattatatgaa
tctcttacctatactcaaatgagtagaacttcagaatcccttgaaagtgaacctgagaat
gcggtgaaaatagaaagcagagatgatcatcttggtcttcccggaggcagcttaccccag
gtgacctgtgaaagcttccttcctaatgctcaagacgtcatttctatcaaccatgatgaa
agtctgctgcccgagtccttggaaaaaatgatgtatggtaagaaaggactcagccgagat
ccaggctctttccaggagagcccaagtaccaacacagaatctaggaaagatgccattacc
atctctgccagcagagatgggagctgccagcgtggtggccataaggcagaaatagattca
gcctcctcgctcatggaaagcttggaagcaggagtggctcaaatgaacattaaaaatgga
aagcatctgttgatatctctttcaaaagatggggagccatgctacagtgaggcaggccag
agacctgaaagcgcggggcagctcgaagacaaatgcttagcttcccctgccgtggacgca
gaaagcgaaagcgggtttgtagagctgtgcagtcttagtgtctgtgactccaaaagaaac
ctgtcgtccgaccagcaattaattgatttactagaaagcaaacatttagaaagtaagctg
attctgagtcagaaccagagtgatgaagaagaggacgaggaagaaaatgaggaggaaacc
ttagcagtggtaactcgcaccagagaaaggccggatgtgttgcacctcaccgagcccacc
cctgtcatcccaaggggaaagaaccgagccttccatctagatgaaggcaagaaaggaagc
ctagaggtggtgagccagactcctggaccacagaggaccttccctcctatagcctgtcag
tgccactgcaaacacatggagaggtgggcacggggcctcgggagtgaggaattcgaagtg
gagaaacccaaagcttataacccagacttgttcaggagcagagccaacagtaccacagtg
gaatgcgagcccactgctgttccatcagagccatttaaagtgaagctcttaaaagacccg
tggaaagaaagtacagagggaaagaaaggtttccccacatacacttccgaaggaagtgaa
cccaagtcagaagacatggattttgaaaataaagatgattatgatagagatgggacctgc
cctaatcaagactatccagggaagtactcggaagaggagagcaagagttcagcctccggc
attgcagacctcggggatgacacacaggaaactcgggcccccaccatcgcccagctgctc
caggagaaaacactctattccttctcagagtggccaaaagaccgggtgataattaaccgc
ctagataatatctgccacgtggtgttgaaggggaagtggccccccagccagcagtatgag
ccttcaggcacacctcccacccccatcttagccagccatgctggttctggaaacagcttc
tcagagccagaaactgcagagcacagcttcagcaacggggcagtattggcggcccaactc
cagcaggagagctttgtagctccggtattcacaaaaggtgagcagaagcacagacgaccc
tatgagtttgaggtggaaagggattccaagggtcggagcctagagcagttctctgccacc
cacgggcaccctcccatcgtcctcaatggctggcatggggaatcagccatagacctctcc
tgctcatcagaggggtccccaggagccacatcccctttcccagtgagtgccagcaccccc
aagattggagctatcagttcacttcaaggaaccctcggcatggacttgtctgggattcta
caagctggcctgatccatccagtgaccggacagattgtcaatgggagcctaaggagagat
gatgcagccacaaggaggcggagagggaggcggaaacctgttgaaggagggatggacctc
atctttctgaaggagcaaacactccaggcaggaatcttggaagtccatgaagacccagga
caggccaccctgagcaccacacaccctgaagggccgggacccgctacctcagcccctgag
cctccaggaacagccagcagccaggctgagaaagccattcccagcaagagcttgcttgac
tggctgcggcaacaggctgactactctttggacgttcctggatttggagcaagtttttca
gataaaccaaagcagaggagaccacgctgtaaagaacctggaaaattagatgtcagctct
ctgagcggagaagagagggttcctgctgtccccaaggagccaggactgaggggattcctc
ccagaaaacaagttcaaccacaccttggccgagcctgttcttcgagatgcaggctcacgc
aggagaggcagacggccgcggactgatctcctgaaagcgcccaccatcgtggcagactct
ccctccggaatggggccgctgttcatgaatgggctaattgcgggcatggatctggtaggg
ttgcagaacgtgagaaacatgccaggcatccccctcaccggactggtgggcttcccagct
ggcttcgccaccatgcccacgggtgaagaggtcaagagcaccctgagcatgctgcccatg
atgctcccgggtgtggccgctgtgccccagatgtttggcgttgggggacttctcaacaca
cccatggccaccacctgcacctcgaccgcgccagcgtctctctcaagcacagccaaaagt
ggcacggcgggcactgagaagacagcggaggacaggccaagcagccacgatgtgaaaaca
gactcactagccgaagacaagcctggtcctagcccgttttctgatcagtccgaacctgca
ataactactagtagtcctgtggcttttaacccatttctcattccaggagtgtctcctgga
ctcatctacccatccatgtttctctcccccggcatgggcatggctctgccagccatgcag
caggccagacactcggaaatcataggtctggagagccagaagaggaagaagaagaagaca
aagggagacagccccaaccccaacccagagcccgctcccgggtgcgagcgggagccaggc
agcgaccagaactgcaccgaggccagtgtccctttgcccccagagagagaacacgtggca
caggctggggaaggggtgctcaaagactccggcaccaactag
DBGET
integrated database retrieval system
