Dipodomys spectabilis (banner-tailed kangaroo rat): 122123790
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Entry
122123790 CDS
T07891
Symbol
Rbfox1
Name
(RefSeq) RNA binding protein fox-1 homolog 1 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsp03041
]
122123790 (Rbfox1)
Spliceosome [BR:
dsp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
122123790 (Rbfox1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
122123790
NCBI-ProteinID:
XP_042554209
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All DBs
Position
Unknown
AA seq
422 aa
AA seq
DB search
MQHPLTGATCVALPNVGVCPQLSCALTFMYLHQGNQDAAAAPDTMAQPYASAQFAPPQNS
IPAEYTAPHPHPHPAPPDYTGQTTAPEHTLNLYPPAQPHPEQSADTSAQTVSGTATQTDD
AVPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG
SKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWKLNPV
VGAVYSPEFYAVPGFPYPAATAAAAYRGAHLRGRGRAVYNTFRAAAPPPPIPAYGGVVYQ
DGFYGADIYGGYAAYRYAQPTPATAAAYSDRNQFVFVATDEISCNTSTVTDEFMLPTPTT
THLLQPPPTALVPCPKVPAPAQTSEELSCILPDLCCQAAEHPTTRPPLLQFMFKVIVTQE
RK
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgcagcatcctctgacgggggccacctgcgtggcgctccccaacgtgggcgtgtgcccc
cagctttcctgtgccttgactttcatgtacttgcatcagggtaaccaggacgcggcggcc
gccccggacaccatggctcagccttacgcctcggcccagttcgctccgccacagaacagc
atcccagcggaatacaccgccccgcacccgcacccgcaccccgcgccgccggactacacg
ggccagaccacggcccccgagcacacgctcaacctgtacccgcccgcccagccgcacccc
gagcagagcgccgacaccagcgcgcagaccgtgtccgggaccgccacacagacagacgat
gccgtaccgacagacggtcagcctcagacacaaccttccgaaaacacggaaaacaagtct
cagcccaagaggctgcatgtgtccaacatccccttccggttccgagatcctgacctccga
caaatgtttggtcaatttggtaaaatcttagatgttgaaattatttttaatgagcgaggc
tccaagggatttggtttcgtaactttcgaaaatagtgccgatgcggacagggcgagggag
aaattacacggcaccgtggtagagggccgtaaaatcgaggtaaataacgccactgcccgg
gtaatgacaaataaaaagaccgtcaacccctacacgaatggctggaaattgaatcccgtg
gtgggtgcagtctacagccctgaattctatgcagtgcccggcttcccgtacccggctgcc
accgctgctgcagcctaccgcggggcgcacctgcgaggccgcggccgtgccgtgtacaac
accttccgggccgcggcgcccccacccccgatcccagcctacggcggtgttgtttaccag
gacggattttatggtgcagacatttatggtggttacgccgcataccgctatgcccagcct
acccctgccactgccgcggcctacagtgacagaaatcagttcgtcttcgttgcaaccgat
gaaatatcttgtaacacctctacagttacggacgagtttatgctgccgacccctaccacc
acacacttgctccagcccccgcctacggcgttggtgccatgccccaaggttccagcccca
gcacagacttccgaggagctaagctgcatacttccagacctctgctgtcaggcagctgag
catccgactacccgccctccccttttacaattcatgtttaaagtcatagtcacccaggag
agaaaatag
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