Dipodomys spectabilis (banner-tailed kangaroo rat): 122126239
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Entry
122126239 CDS
T07891
Symbol
Ddx19b
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03013
Nucleocytoplasmic transport
dsp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122126239 (Ddx19b)
03015 mRNA surveillance pathway
122126239 (Ddx19b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsp03019
]
122126239 (Ddx19b)
Enzymes [BR:
dsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122126239 (Ddx19b)
Messenger RNA biogenesis [BR:
dsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
122126239 (Ddx19b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
122126239
NCBI-ProteinID:
XP_042556842
LinkDB
All DBs
Position
Unknown
AA seq
479 aa
AA seq
DB search
MATDSWALAVDQQEAAAESLSNLHLKEEKIKPDINGAVVKTSANAEKTDEEEKEDRAAQS
LLNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQE
NALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPANRYPQCLCLSPTYELALQTGK
VIEQMGKFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFV
LDEADVMIATQGHQDQSIRIQRMLPKNCQMLLFSATFEDSVWQFAQKVVPDPNVIKLKRE
EETLDTIKQYYVLCNNRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQV
ALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN
ETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNKIQEHFNKKIERLDTDDLDEIEKIAN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggccacggactcgtgggccctggcggtggaccagcaggaagcggcagctgagtcgtta
agcaacttgcatcttaaggaagagaaaatcaaaccagatatcaatggtgctgttgtcaag
accagtgctaatgcagaaaagacagatgaagaagagaaagaggacagagctgcacagtct
ttactcaataagctgatcagaagcaatcttgtggataacacaaaccaagtggaagtcctg
caacgggaccccaactccccactctactccgtgaagtcttttgaagagcttcgcctgaaa
ccacagcttctccaaggagtctatgccatgggtttcaaccgtccgtccaaaatacaagag
aatgcattgcctttgatgcttgctgaacctccacagaacttgattgcccagtctcagtct
ggtactggaaaaactgctgcctttgtgttggccatgcttagccaagtagaacctgcaaac
agatacccccagtgcctgtgcctttccccaacatatgagctggcacttcaaacaggaaaa
gtgattgagcagatgggcaaattttaccctgaactgaagttagcttatgctgttcgaggc
aataaattggaaagaggtcagaagatcagtgagcagattgtcattggcactccggggact
gtcctggactggtgctcaaagctcaagttcattgaccccaagaagatcaaggtgtttgtt
ctggacgaggcagacgtgatgatagctactcagggccaccaggaccaaagcatccgcatc
cagaggatgctgcccaagaactgccagatgctgcttttctctgccacctttgaagactca
gtgtggcagtttgcccagaaagtggttccagaccccaatgttatcaaactgaagcgcgag
gaggagacgttggacaccatcaagcagtattacgtcctgtgcaataacagagatgagaag
ttccaggccttgtgcaacctgtatggggccatcaccatcgctcaagccatgatcttctgc
cacacccgcaaaactgctagttggctggcagcagagctctccaaagaagggcaccaggtg
gctctgctgagtggtgagatgatggtggagcagagggctgccgtgattgagcgcttccgc
gaaggcaaggagaaagttctggtgaccaccaacgtgtgtgcccgggggattgatgttgaa
caagtgtctgttgtcatcaacttcgatcttcctgtggacaaggatgggaaccccgacaat
gagacttacctgcaccggattgggcgcaccggccgctttggcaaaagaggcctggccgtg
aacatggtcgacagcaagcacagcatgaacatcctgaacaaaatccaggagcattttaat
aagaagatagaaagattggatacggatgatttggatgagattgaaaaaatagctaactga
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