Dichomitus squalens: DICSQDRAFT_101802
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Entry
DICSQDRAFT_101802 CDS
T03133
Name
(RefSeq) hypothetical protein
KO
K12236
transcriptional repressor NF-X1
Organism
dsq
Dichomitus squalens
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dsq03000
]
DICSQDRAFT_101802
04121 Ubiquitin system [BR:
dsq04121
]
DICSQDRAFT_101802
Transcription factors [BR:
dsq03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
DICSQDRAFT_101802
Ubiquitin system [BR:
dsq04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
DICSQDRAFT_101802
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
R3H
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
18833327
NCBI-ProteinID:
XP_007363497
JGI:
101802
LinkDB
All DBs
Position
Unknown
AA seq
1107 aa
AA seq
DB search
MPDTAAAPSTTAPATGSADPGARRHRPRRLPQDGKRAEDLGPRPATGDGPEGPISSNSRG
EGASRPRRPRAPKIQDAHPGEQSRPRRDGPSGGKHQEKKAQGDADVGNDTPKGEGSNRQP
RPKGRGGRPGEGHPGAAPLSGTSTPKRTKEKDTLLEGTPASRNLRQRRRKFGGELTDGRN
ESVTQDAPPTEKYRSTAPKLKADDLTSRLTEELSTPPYPDCLICFAPITPMQPTWSCSPS
HPTLAATDDEGASPGKPQPADTSAQCCWMTFHLKCIKPWAVKSVKDVEEAWRARGEERQG
DWRCPGCQSKRSAIPSSYWCFCGSTPDPKPPRLATPHSCANPCTRTRVCGHPCSLNCHPG
PCPPCQVTTSHACYCGKETISFRCSNLSHGRATTELSCHQFCERKLSCGNHVCQEICHPG
KCSPCLVRETARCYCGKVEKDLGCGEGEDKECAVVLDGQEEKWVGRFACEETCDRPFDCG
IHHCKKSCHVPSPTPAPCPRSPKIVTHCPCGKHALAPESAPFFPPGALLTRTACTDPVPT
CASTCMKPLEGCEHVCSAKCHTGHCPPCSIRIVRPCRCGSTTREVLCSEDQAMARARARG
ESGPDSEILCERPCHILRECGRHQCNRICCPLAAVLASLAKGKGKKKPADALVDPEGWHQ
CDLVCGKPLSCGNHHCAERDHKGACPPCLRSSFDEMVCYCGRTVLEPPIPCGTRMACMYP
CPRPPPLCGHPKMPHLCHEDPTPCPPCVHLTTKQCACGKKMVDHVKCSQAQEKVSCGATC
GKLLPCGFHHCERSCHADACGDCHATCGKPRKLCLPALHACQLSCHAPASCDESEPCRAI
VTITCPCGRIRQPIPCGRSLSNPGGRESTQQLKCSNECAIAKRNALLAEALGINPDRDSR
ANQVTYSDELASFARANVKFCALVEKSFADFLATDKKSQVLPHMPEQKRKFVHDLAAVYR
MDTQMVDQEPHRSVQLIRRVDSRVPAPLLSASVGGASGLGKLADLRSAGGLQSLSRPSFS
RASLAPVSQPAPGTSSGRGWTSVVARPPQSASPAPSSWGTPPRTKTPVRPAPSPGPIRTA
PITAPALAPVATPLSPQDVPDDWEDVA
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgccggatactgctgctgccccatccacaaccgcccctgctacaggtagcgccgacccc
ggcgcccggcgccacagacctaggcggcttccccaggacggaaagcgggctgaagacctt
ggacctcgtcctgcgaccggagacggccccgaaggtcccatcagcagcaatagcagagga
gaaggcgctagcaggccgcgtaggcctcgcgcccccaaaattcaagacgcgcatccaggt
gagcagtcacgacctcgtcgggatggcccatcaggcggaaagcatcaagaaaagaaggca
caaggagatgcggatgtaggcaatgacacaccgaaaggcgaaggctctaaccgccaaccg
aggcccaagggtcgtggtgggagaccgggagagggacatccgggcgcggcgcccttaagc
ggaacgagcactcccaaacgcaccaaggagaaggatacgttacttgaagggactccagct
tccaggaatttgcgccagcgtcgacgcaagtttggcggtgagctcaccgatggacgcaac
gagtcggtcacgcaagatgcccctcctactgagaagtaccgcagtaccgcacccaagctc
aaggccgacgacctcacctcgcgactcactgaggagctcagcaccccgccctaccccgac
tgtctcatttgcttcgcaccgatcacccccatgcagcccacttggtcgtgttctccctcc
catcctactttggccgcaacggacgacgagggtgcctcgcctggtaaacctcagccggcg
gacacatcggcacagtgctgctggatgacgttccacctcaagtgcatcaagccctgggcc
gttaagagcgtcaaggatgtcgaagaggcgtggcgagcgcgaggcgaggaacggcaggga
gactggcggtgccctggctgccagtcgaaacggagcgccatcccgagcagctattggtgc
ttttgcggctctactcccgatccgaagcctccgcgtctcgcgacccctcactcgtgcgcg
aacccgtgcacccgtacacgcgtatgcggccacccctgctcgctcaactgccaccctggt
ccctgccctccttgtcaggtcacgacgtcgcacgcgtgctactgcggcaaggagacgatc
tcgttcaggtgctcgaatctcagccacgggagagcgaccacagagctatcatgtcaccag
ttctgtgagcggaagctcagctgcgggaaccacgtctgtcaagagatttgccacccaggc
aagtgcagcccgtgcctcgttcgagagacggcgcgatgctactgcgggaaggtcgagaaa
gatttgggttgtggagagggcgaggacaaggagtgtgcggttgtcctagatgggcaagag
gaaaagtgggtcgggcgctttgcctgtgaagagacatgcgacagacctttcgactgtggc
atccaccactgcaagaagtcatgccatgtgccttccccgaccccagcaccttgtccccgc
tcgcccaagatcgtcacgcattgtccctgcggcaagcacgctctggctcccgagtccgcc
cccttcttccctccaggcgctctgctcacacgcacggcatgtaccgatcccgtccccacc
tgcgcgtcgacttgcatgaagcccctcgaagggtgcgagcacgtctgttccgcgaaatgc
cacaccggccactgccctccatgctccattcggatcgtccgcccctgtcgatgcggctcg
acgacgcgcgaggtgctctgctccgaagaccaagccatggcccgtgcgcgcgcccgcggc
gagagcgggcccgattcggagatcctctgcgagcgcccctgccacatcctgcgggagtgc
ggccgccatcagtgcaaccgaatttgctgtccgctagccgcggtgctagcgagtctggcg
aagggcaagggcaagaagaaacccgcggacgcgctggttgaccccgagggctggcaccag
tgcgacctggtgtgcgggaagccgctgagctgcgggaaccatcattgcgcggaacgcgac
cacaagggggcgtgcccgccctgtctgcgcagttcgttcgacgagatggtttgctactgc
ggtcgcactgttctcgagcccccgatcccctgcggcacgaggatggcatgtatgtatccc
tgtcctcgccctccgccgttgtgcggacatccgaagatgccgcacctctgccacgaagat
ccgacaccgtgtccgccctgcgtgcatctcaccactaagcagtgtgcctgcgggaagaaa
atggtcgaccacgtcaaatgctcgcaggcgcaggagaaggtgtcttgcggcgccacgtgc
gggaagctgctcccttgcggtttccaccactgcgagcgttcttgccatgcggacgcgtgc
ggcgactgccatgctacttgcggcaagcctcgaaaactctgcttacccgccctccacgcg
tgccagctttcttgccatgctcctgcctcctgcgacgagtctgagccgtgccgcgcaatc
gtcaccatcacctgtccttgcggccgcatccgccaacccatcccctgcggccgctcccta
tcaaaccccggcggccgcgagagtacccagcagctcaagtgctcgaacgaatgcgccatc
gcgaagcgcaatgcgcttctggcagaagcgctcggtatcaacccggaccgcgacagccgt
gccaaccaagtcacgtactcggacgagctcgcgagcttcgcgcgcgcaaacgtcaagttc
tgcgcgctcgtcgagaagagcttcgcggacttcctcgcgacggacaagaagagccaggtg
ctgccgcacatgcccgagcagaagcgcaagttcgtgcacgacctcgcggccgtgtaccgc
atggacacccagatggtcgaccaggagccgcaccggagcgtgcagctcatccggcgcgtc
gactcgcgtgtacccgctccgcttttgtcggcgtcggtcggcggcgcgtctggcctgggc
aagctcgcggacctccgctcggctggtggcctgcagtcgctgtcccgccccagtttctct
agagcgtctctggctcccgtctcgcagcccgcgccagggacctcgtctggcagaggatgg
acgtccgtcgttgcccgtcctcctcagtccgccagtcctgcgccaagctcatggggcact
ccgccacgcacgaagactccagtgaggcccgctccgtcccctggacctatccgtaccgcc
ccaatcactgcacccgcgcttgcacccgtcgcaacacctcttagcccgcaggacgtgccc
gacgactgggaagacgtggcatag
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