Dichomitus squalens: DICSQDRAFT_136334
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Entry
DICSQDRAFT_136334 CDS
T03133
Name
(RefSeq) hypothetical protein
KO
K14328
regulator of nonsense transcripts 3
Organism
dsq
Dichomitus squalens
Pathway
dsq03013
Nucleocytoplasmic transport
dsq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
DICSQDRAFT_136334
03015 mRNA surveillance pathway
DICSQDRAFT_136334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsq03019
]
DICSQDRAFT_136334
Messenger RNA biogenesis [BR:
dsq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
DICSQDRAFT_136334
mRNA cycle factors
P-body specific factors
DICSQDRAFT_136334
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
18835461
NCBI-ProteinID:
XP_007365530
JGI:
136334
UniProt:
R7T058
LinkDB
All DBs
Position
Unknown
AA seq
486 aa
AA seq
DB search
MIDTARPSKAKGKDKEKEKKSKSSSGGQKSQTERLKTVVRRLPPNLPEDIFWQSVGKWVT
DETVTWKAYYQGKFKTRLNKENIPSRAYIAFRDEEILATFSREYDGHLFRDKNGNESIAI
VEFAPFQKVPNEKKKADSRAGTIEKDEDYISFLESLKEVSSKPFDLDTLETLIASTQPAP
LPTTTPLLEALKAEKSAQKDKESILRNHAHYKDPAALAAAAAATKKGDKKKDAAGGGKDK
MADSGASKKAAKKAAAAAKAAAHQQQGQAQAGASKDVKATAATSANKQGASKPPKAPRER
KGTASGPSVSSSASTSGSAAAPAPASAAPFAAEDYAGIPMRCACPVLSIASRQFEAALSG
AGVERKSRRERDKDKDKDKDGAVASTTSSTVVAEAPPAPRQKEEKRERGPRGGGVPTGIL
QRDAAPPKILARPAQGQTTSEGSAPASAASVALGATDGGDPGTPGGGRGRGRGRGRGRGR
GAPPQG
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacacagctaggccttccaaggccaaagggaaggataaagagaaagaaaagaaa
tctaagtcctctagcggaggtcagaagtcgcagaccgaacgcctcaagaccgtggtccgt
cggctaccgcccaacctccctgaggacatattctggcagagcgtcgggaaatgggtcaca
gacgagactgttacgtggaaggcatactaccaaggaaagttcaagacacggttgaacaag
gagaacatcccgtcgcgcgcatatatcgcattcagggatgaggagatcctcgcaacattc
agcagggagtatgacgggcatttgttcagggacaagaacggcaacgagtccatcgcgata
gtcgaatttgcaccatttcagaaagtgcccaatgagaagaagaaggcagacagcagggca
gggacgatcgagaaagacgaggactacatctcgtttttggaatcactcaaggaggtttct
tcgaaacctttcgatttagatacccttgaaacattgatcgcttcgacccagcctgcaccc
ctcccaacgactaccccgctcctcgaagcactcaaagctgagaagtcggctcagaaagac
aaagaatccatcctccgcaaccatgcgcactacaaggacccagcggctctagcggcagca
gcggcggctaccaagaagggagataagaagaaggatgctgctgggggcgggaaggacaag
atggcggattctggtgcgagcaagaaggctgcgaagaaggctgcggccgcggcgaaagcg
gcggcgcatcagcagcagggccaagcacaggcgggcgcgagcaaggacgtcaaggccacc
gccgcgacatccgcaaataagcagggcgcatcgaagccaccgaaggcgcctcgggagcgc
aaggggaccgcgtctggaccttcagtgtcgtcgagcgcgtcgacgagtgggtcggctgct
gccccggcacctgcctccgccgctccctttgctgctgaggactatgccgggattcccatg
cgttgcgcatgcccagttcttagcatcgcctcgcgacagttcgaggctgcgcttagcggg
gcgggcgtcgagcgcaagtcgcgtcgcgaacgcgacaaagacaaggacaaggacaaggat
ggtgccgtggcatcgacgaccagctccacagttgtcgcggaagcgcctcctgcgcccagg
cagaaggaggaaaaacgcgagcgtggtccccgcggtggcggcgtcccgaccgggatcctg
cagcgcgatgcggccccgccaaagatattggcccgtcctgctcagggacagacaacgagc
gagggctcagcccctgcgtctgctgcgtctgtagccctgggtgcgactgatggcggagat
cctggcactcctggcggagggcggggtcgcggtagaggcaggggccggggtcgagggcga
ggtgctcctccgcaagggtga
DBGET
integrated database retrieval system