Dichomitus squalens: DICSQDRAFT_150803
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Entry
DICSQDRAFT_150803 CDS
T03133
Name
(RefSeq) pectin lyase-like protein
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
dsq
Dichomitus squalens
Pathway
dsq00040
Pentose and glucuronate interconversions
dsq01100
Metabolic pathways
Module
dsq_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
DICSQDRAFT_150803
Enzymes [BR:
dsq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
DICSQDRAFT_150803
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Ortholog
Paralog
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Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
18836944
NCBI-ProteinID:
XP_007371504
JGI:
150803
UniProt:
R7SIS8
LinkDB
All DBs
Position
Unknown
AA seq
413 aa
AA seq
DB search
MMRISLLGLLAVVTPALAHGRDPHQKTCHVPAIGGGEDDGPAILAAFKECSKNAKIVLDK
YYVVDTLLLTKGLENVDVELSGTVQYTPDIAKWSPQSLYLTYQNATTFWFLSGNNIHLYG
GGTLDANGQVWWDTFNNTHNAGTAGGSSRTFARPIPLTVGNATNVVVENIKQIGSPFWFV
YQSTNVTYKNINIRTVSYSSSPTANSDGWDIYRSDHITIRDSIVINDDDCVSFKPNSTNI
VVANMWCNGSHGISVGSLGQYAGETDIVANVFVKNITMLNAQNGARIKVFGGNPSPNSTV
GGGTGYVKNITFEDFFVSNVDNPVLINQCYSTPAATCAQFPSNLSISDVHYINVTGTSSG
AEGSVVVDLECSDTCEDITATGTKLTPKNGTAEYICKNIASTSELDFNCTAPS
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgcatcagccttcttggacttctggctgttgttacccccgctcttgctcatggc
agggatccgcaccagaagacgtgccatgtccctgcgatcggcggaggagaggacgacggc
cctgctattctggccgccttcaaggagtgctcgaagaacgccaagattgtccttgacaag
tactacgtcgttgatactctcttgctgacgaagggcttggagaatgtggatgttgagctg
agcgggaccgtgcagtacacgcccgacattgcgaaatggtcgcctcaaagtctgtatctg
acctaccagaacgcaacgacgttctggttcctctccgggaacaacatccacctgtacggc
ggcgggacgcttgacgccaacggtcaagtatggtgggatacatttaacaacacgcataac
gccggcacggcgggtggctcctccagaactttcgcgcgacccatcccgctgactgtcggg
aatgcaacaaatgtcgtggtcgagaatattaagcagattggctcgcctttctggttcgtg
tatcagagcacaaatgtcacgtacaagaacatcaacatccgcaccgtctcttactccagt
agccccaccgccaactcggatggctgggacatctaccgttcggatcacataactatacgc
gattccatcgttatcaacgatgatgactgcgtgtcattcaagccgaacagcacgaacatt
gttgtcgcaaatatgtggtgcaacggctctcacggcatctccgtcggcagcctcggacaa
tacgcgggggagacggacatcgtcgcgaacgtgttcgtgaagaacatcacgatgctgaat
gcacagaatggcgcgcggatcaaggtctttggcggaaacccttcccccaatagcaccgtg
ggtggagggacgggatacgtcaagaacatcaccttcgaggacttctttgtgtccaacgtc
gataacccagtcctgatcaaccaatgctactccacccccgccgctacatgcgcgcagttc
ccgagcaacctcagcatctcagatgtacattacatcaatgtcactggcacgtcctccggc
gcagagggcagcgtcgtcgtcgacctcgagtgctctgacacgtgtgaggacattactgcc
acgggaacgaagctgactccgaaaaacgggacggcggaatacatctgcaagaacatcgcg
agcacgtcagagctcgacttcaactgcaccgctccatcatga
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