Dichomitus squalens: DICSQDRAFT_176760
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Entry
DICSQDRAFT_176760 CDS
T03133
Name
(RefSeq) hypothetical protein
KO
K20305
trafficking protein particle complex subunit 8
Organism
dsq
Dichomitus squalens
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dsq04131
]
DICSQDRAFT_176760
Membrane trafficking [BR:
dsq04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
DICSQDRAFT_176760
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAPPC-Trs85
Motif
Other DBs
NCBI-GeneID:
18840453
NCBI-ProteinID:
XP_007360495
JGI:
176760
LinkDB
All DBs
Position
Unknown
AA seq
1423 aa
AA seq
DB search
MPQPTLPSSLSPHVCILASPDVQQVLDGAGLPPLPEVLQCFSPLPQITTRTTSLTSVPHP
SFALRFSDVVEIENAVHEDEEQRAGRTMDWIGSRIAQRCERWLDMLETESREGGKMWRTR
TPWWDEVKRCVDGDHVPSSAEGWNHPVSLVLAVSTTAANPLQALQDLASRAFDFPPWVDI
TSLRYFLIIHPSNSPLADPIAEALFNAVKKQYGLHSFLLPLQLPTSPCPDPVPVPTLPPR
LPTQSTLDSPPLQPKNITLAPEEDVSRTPGLVPPRPPASPMPRGPAPPPLTNKPTDQPPP
PAMADDYTGSTLRLAPDDIQQIGRFVREFVTMSLVPWMEKCVVEWNENYSSSRRLPSRLF
SSTRRLFGASAAASSATPTHGSNPSITSINTRFSHGANSSVSSITSVTSVSNMGPGSVNQ
QRRLAEFATILGDYKLAISVWEALRKEGRGGSDILPLLSAPSPALALHADHALAILTGPQ
PRQPTTFEVPALAQYRALVYAARWETGIERQEFLGPVLEGERWLVKAASSAEEPPTAILY
AHAAFLSELRGARRRAALWYLVAADKLEKTGIKPLALFFFRKAHDLYQDHIPKELSPSFW
ESEDRSSLHWEGFSAVVPGIEHALGRLLYTTGDTAGAVQYFLTLIKPSAATRPNPSYGAV
NGAASPLLPTPSTDKVYLEDFLVAFKHFKATEGDAWKNLNLKLPITFCQAKQTRIRSPGD
AVEGDSATWEKLEQNWSAFWTPRSKEKLGKSGKAAVNETFWVDLVLRNPLDVEVSLSALT
VTVREASSLDEDTTRDFVQVEVIEDVSLGPKDTRTIPIGIKCSRPASLVVTSATFQFFSL
LSATDSLAVRGRRLNDTPIQRQGKVYAPDVLIKVEVEEAGQRLHAHFVDGRHLVLAQGEY
KHQRIWLTNSGTRPVSELWLLAGEEDELWIDLEDDNADPSSSTPPKVETLQSPNSLAPRR
PYRIPIERLHSSPQLAPGDEMQLPFILHAAHHGEQDLCILFVFRESNSAPFHCTRVTRRY
EVRPILKVTTSMRPSGSSDHMYTIGVEIENTTGASNLQITQLSTMSATWRCSPLHSSTSA
SIPPRQVADFLLGANPWQEGRGASETKEFVANKLQALLKGEPADDSEPPPIDLTCTHIAE
ARFPSFGSDMVPLRTPATRHFLHCGRRTITAQATASSHPDIPARLHRSIFPLYNPSNVDV
VVFWELPSQKRAGHILLQGPTLGAQHAVLREIVDAAENMKVKRSMYSETQREREAIVQAV
KNSDWNRETDPMLVFVKDGTVVEHDFRQGPCHVPIAFTLRNLSLTHPARTTLKLVEPPPA
DSSSDLLPPPYAGRLIHRHVLGPSQSATVYAKLWATRPGSFVLNSWTVETEVGEPSSSSS
SSEAAPSASQSTGGWKSRHLRYVQSPRAGDRPFVTVVDVGRLK
NT seq
4272 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagccaacgcttcccagctcgctcagtccccatgtttgtatattggcctccccg
gatgttcagcaggttcttgatggggctggcctgccgcctttgccggaggttctgcagtgt
ttctcgccattaccacagattacaacacggacaacgtctctgacttcggtacctcatcct
tcatttgcgctccggttctcagacgtcgtggagatagagaatgccgttcacgaggatgag
gagcagcgcgccggcaggactatggactggatcggctcgcgcatcgcacagcgctgtgag
cgatggctggacatgctggagacggaatctagagagggcgggaagatgtggcggaccagg
acgccatggtgggacgaggtgaagaggtgtgtggatggcgaccatgtcccgagtagtgcg
gagggttggaatcatcccgtgtctctggtcctcgccgtttctactacggcggccaacccg
ctgcaggcgctgcaagatctggcctctcgcgcattcgacttcccgccatgggtagacatc
acgtctttgcgctacttcctcatcatccacccgtcaaattcacccttggctgaccccata
gctgaagcgttgttcaatgctgtcaagaaacagtatggcctacatagttttctcttaccc
ctacagctccctacatctccgtgccccgaccctgttcccgttccgactctgccaccacga
ctgccgacgcagtccacacttgattctccccctctacagccgaagaacatcactcttgct
cctgaagaggacgtatcgcgaacgcccggcctagtgcctccgcgtcctccagcatctccc
atgcctagaggtcctgcaccacctcctctaaccaataagccgactgatcagccgccgcct
ccagcaatggccgacgattatacagggagcacgctccgtctagctccagatgacattcag
caaattggtcgttttgtacgcgagtttgtgaccatgagcctggtgccttggatggagaaa
tgtgtggtagaatggaatgagaactactcctcatcccgacgtctcccctcgcgtctgttt
tcgtcgacccgtcgattattcggtgcctcagctgcagcatcctcagcaactccgacgcat
ggctccaacccatctatcacctccatcaacaccagattcagccacggcgcaaacagctcc
gttagttcgatcacatcggttacctcagtctctaatatgggccctgggagcgtcaaccag
caacgacggctcgccgagttcgcgaccatcctgggtgactacaaactagctatctcagta
tgggaagcgctaagaaaggaagggagaggcggttctgatatcttacctctcctttctgct
ccctctccagctttggccctccacgcggaccatgcgctcgccatactcactggtccacag
ccccggcagcctactacattcgaggtgccagctcttgctcagtaccgggcattggtctat
gcagcacgttgggagaccggtatcgagcgccaggagttcctgggccccgtccttgaaggg
gaaagatggctggtcaaggctgcctcgagtgcagaagagccgcccacggctattctgtat
gcgcatgctgcctttctcagcgagctcaggggtgcaaggcgtagagctgcgttgtggtac
ttagttgctgctgacaagctggagaagaccggtataaaaccgctcgcgttgtttttcttc
cgaaaggcccatgatttatatcaggaccatatccccaaagagctctcgccatcattttgg
gagagcgaggaccggagttccttgcattgggagggcttctcagctgttgtgcccggtatt
gagcacgcgttaggtcgtttgctctacacgacgggtgataccgccggcgctgtccagtat
ttcttgactctcatcaagccgtctgctgccacgagacccaatccttcgtatggagcagtc
aatggcgctgcttctccattactccctaccccaagcacggacaaagtgtatttggaagac
ttccttgtcgccttcaagcacttcaaggccaccgaaggtgatgcttggaagaacctgaac
ctgaagctccccattacattctgtcaagccaagcaaactcgcatccggtcgcctggggat
gctgttgaaggtgactccgcgacctgggaaaagcttgaacagaactggtccgccttctgg
acacctagaagcaaagagaagctgggcaagagcggaaaggcagccgtcaatgaaacattc
tgggtggacctcgttctccggaatcctctggacgtagaagtttctctatcggctctgacg
gttaccgtacgagaagcctcgtcattagatgaggatacaacgcgcgacttcgtgcaggtc
gaggtcatcgaagatgtctccttgggccccaaagatacccgcacaataccaattggtatc
aagtgttcacggcccgcctcgctggtcgtaaccagcgcgactttccagttcttttccctg
ctctccgctaccgactcgcttgctgtgcgtggtcgccgcctcaatgatacccctatacaa
cggcaaggcaaggtctatgcaccagatgtattgatcaaggtcgaagtggaggaagccggt
cagcggttgcatgcccacttcgtcgacggccggcacctagttctcgctcagggcgagtac
aagcaccagcggatatggctcactaactctgggacgcgcccagtcagcgagctgtggcta
ctcgctggggaagaggatgagctttggattgatctggaggacgacaatgcagacccatct
tcatcaactccgcccaaggttgagacactacaatcccctaactcactcgccccaaggagg
ccatatcggattccgatagagaggctacattccagccctcagctcgcgccaggagatgag
atgcaattgcccttcatcctgcatgcggcccatcacggcgagcaggatctgtgcatcctg
tttgtattccgagagtccaacagcgccccgttccattgcaccagggtgacccgaagatac
gaggtcaggccaatactcaaagtgacgacgtcgatgcgacccagcggctcgtcagaccac
atgtacaccatcggggtcgagattgagaacaccacaggggcgagcaaccttcagattacg
cagctctcgaccatgagcgcaacgtggagatgttccccattacactcctcaacatctgct
tccattcctcctcgccaagttgccgattttctcctgggggccaacccgtggcaagagggc
aggggtgcttcggagacgaaggagtttgtggcgaacaagctccaagcacttctgaagggc
gagccagcagatgattcagagcctccaccaattgacttgacgtgcactcatatcgcagag
gcacgtttcccttcctttggctcggacatggtcccgctgcgcacgcccgcgacgaggcac
ttcctacactgcggccggcgcaccataaccgcacaagcgaccgcgtcctcccaccccgac
atcccagcacgcctacatcgttccatcttcccgctctacaacccctccaatgtcgacgtc
gtcgtcttctgggagcttccatctcagaaacgtgcaggccacatccttctgcagggcccg
acattgggcgcgcaacatgcagtcctgcgggagatcgtcgacgccgcggagaacatgaag
gtgaagcggtcgatgtattcagagacgcagcgcgagcgggaggcgatcgtccaggccgtg
aaaaactccgattggaatcgggagaccgatcctatgttggtgtttgtcaaggacggcacg
gtcgtggagcacgacttcaggcaaggcccttgccacgtcccgatcgccttcacccttcgg
aacctttcacttacgcacccggcgaggacgacgttgaagctcgttgaaccgccccccgcg
gactcgtcttccgacctcctcccaccgccgtacgccggccgcctgattcatagacatgtc
ctcgggccctcacaatctgccacagtctacgcgaagctctgggcgacacgaccagggtcg
ttcgtgctcaactcgtggaccgtggagaccgaggtcggcgagccgtcatcctcatcatct
tcatcagaggcggcaccctctgcgtcgcagtcaacaggaggctggaagtcgagacactta
cgttacgtccagagcccgcgggcgggtgaccggcctttcgtaacagtggtggacgtcggg
cggctcaagtag
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integrated database retrieval system