Drosophila serrata: 110179731
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Entry
110179731 CDS
T06108
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
dsr
Drosophila serrata
Pathway
dsr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
dsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
110179731
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsr03400
]
110179731
Enzymes [BR:
dsr01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
110179731
DNA repair and recombination proteins [BR:
dsr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
110179731
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
RNA_ligase
BRCT_2
DNA_ligase_A_C
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
110179731
NCBI-ProteinID:
XP_020803006
LinkDB
All DBs
Position
Unknown
AA seq
925 aa
AA seq
DB search
MSVDISSTIKFRDICDLFEKLKATKKVANKEDVLKSYYESFCRHRESFRKETGLADDQVE
SGASSFYSVLRLLLPSADTGRDNYGLQITALGRLYIRVLQLAKDSSDAIMLQHRSGNMYR
DYGDVVYAVLKPRCFNPASNLRLKHIHEMLDTIANGDTTVKEQELIRFTQEASPEEQKWL
IRLLLKSLGLGIGEQKIFGVLHPKAQDIYQRCSDLGHVCNLLADNATDLNASGTSNSTDS
KDNVKPVNLNAVIRPFHQIRPMLCERFPGDIHELMQSDVLYLETKMDGERFQLHIDRGRF
MYISRNGVDYTRNFGDSYDRVGTLTPKLRGLLPLGLQSIILDGEMMIWDTVQERFREKGE
NTDVKSLKPDRSWQPCFVVYDLLYFNGQSLLDHTYIQRAYKLQKLLVEQRGVLQLMRGRK
IGSVEEFNQLFQEALDSNAEGIVLKKQGSVYQPGVRLGGGWYKDKADYIKGLITEFDVLI
IGGFYNRKRTFIESFLLGVLQPASNGSTSSHRHEVFSIGCVTNNTQQRGVLNHTLKPHWH
DVIKEPPPLWYHYKANDRTGCPDLWIEPQNSIILQVKAADLAPNSAFFTRKSLHFPRIEL
KRDDKSWNECMTLKEFNDLCEGSKAIKKLNKRQLRLEDLTTKRKRLRMTPSERSRIGLSV
YEKRCELDPTSSSRTKMFDGLSFCILSGSAGRYSKRQLQELAVLNGGCIVENPLPNDPKC
FCIAGDQTFLVKRLILQQPRTCDIVSMDWLLRICRKQELELRPKDLMAATEPLQRELAEC
FDKFGDSYEKDIADIEELQELLLDMDKVTVEEEEAVSSELDALEDQLLEGKKSLNLFRNL
YAEFYEPHGDRLAKILFLQNGGKLAEATDPKLNLGFNCMPSGMDDDHLEQWLQNHPRLSA
DKMLNSAWIHQSLREGLLLPQSSFV
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtggatatatccagcacgatcaagttccgggacatctgtgatctgttcgagaag
ctgaaggccaccaaaaaggttgccaacaaagaggatgtgctaaagagttactacgagtca
ttctgccggcatcgcgaatcttttcgcaaggaaaccggcctggccgacgaccaggtggag
agcggagccagcagcttctactccgtgctgcgcctgctactcccgagcgcggacacaggc
cgagacaactatgggctgcagattacggcgctgggcaggctctacattcgggtgcttcag
ctggccaaggactccagcgatgccataatgctgcagcaccgcagtgggaacatgtacaga
gactacggcgatgtggtctatgccgttcttaagccgcgctgcttcaatccggcaagcaat
ctgcggctcaagcacattcacgaaatgctcgacaccattgctaacggggacacaacagtt
aaggagcaggaactaatccggtttacacaggaggcctcgccggaggagcaaaagtggcta
atacgactgctcctgaagagcctgggcctgggcattggcgagcagaaaatatttggggtc
ctacatcccaaggcacaggatatctaccagcgctgctcggatctgggccatgtttgcaac
ctgctggccgacaatgccactgacctgaacgccagtggcacctccaactccacggacagc
aaggacaatgtcaagcccgtaaatctgaatgctgtcattcgaccattccatcaaatccgt
cccatgctgtgcgaacgctttccgggcgacatccatgagctaatgcaatcggacgtgctc
tatctggagaccaagatggatggggagcgcttccagctgcatatcgatcgcggccgcttc
atgtacatctcgcggaacggcgtggattacacacgcaactttggggacagctacgaccgc
gtcggcaccctgacgcccaagctaaggggcctgctgccgctgggtctgcagtccattatc
ctggacggcgagatgatgatatgggacaccgttcaggagcgcttccgcgagaagggcgag
aacacggacgttaagagcctgaagcctgaccgcagctggcagccctgcttcgtcgtctac
gatcttttgtatttcaatggccagagccttctcgaccacacctacatccagcgtgcctac
aagctccagaagctgctggtggaacagcgtggcgtgctgcaattgatgcgtggccgcaag
attggctcggtggaggaattcaaccagctcttccaggaggccctcgactccaatgccgag
ggtatagtgctgaagaagcagggctccgtctatcagccgggagtgcgactgggcggtggc
tggtacaaagataaagcggattacatcaagggccttatcacggagttcgatgtgctgatc
attggcggcttctacaatcgcaagcgcacattcatcgaatccttcttgctgggcgtcctc
cagccggcatcaaatggcagcacctcctcccatcgccatgaggtcttcagcattggctgc
gtcacaaataacacacagcagaggggtgttttgaatcacaccctgaagccacattggcac
gatgtgatcaaggagccgccaccgctgtggtatcattacaaggcgaacgatcggacggga
tgccctgatctctggatcgagccacaaaattcgattatcttgcaggtgaaggcggccgat
ttggcaccgaattcggcgttcttcacccgcaaatcgttgcactttccgcgcatcgaactg
aaacgtgatgacaaatcctggaacgagtgtatgacgctcaaggagttcaacgatctgtgc
gaaggttccaaggccatcaagaagctaaataagcgtcagctgcgactggaggacttgacc
acgaagcgaaaacgtctccgaatgacaccttcggaacggagccgcataggactgtccgtc
tacgaaaagcgctgtgagctagatccaaccagttcgagtcgcactaagatgttcgatggc
cttagcttttgcattttaagcggctcggctgggcgttatagcaaacggcagctgcaggag
ctggccgtgctgaatggaggctgcatcgttgagaatcccctgcccaatgatcccaagtgc
ttctgtattgccggcgaccagacattcttggttaagcgactcattctgcagcagccgcgc
acctgcgacattgtgagcatggactggctgctgcggatctgtcgaaagcaggaactggag
ctgcggcccaaggatctaatggcggccaccgagccactgcagcgagagctggccgagtgc
tttgacaagttcggggatagctacgaaaaggatattgcggacattgaggagttgcaggag
ctgctgctggacatggacaaagtgacagtagaggaagaggaagcggtgtcatctgagctg
gatgccttggaggatcaactgctggaggggaaaaagagtcttaatctgttccggaacctg
tacgccgagttctacgagccgcacggggatcgcttggccaagattctgtttctacagaac
ggtggcaagttggctgaagcaaccgatccaaagctcaatctgggcttcaactgcatgccc
tcgggcatggatgatgatcacctggagcagtggcttcaaaaccacccaaggctgagtgct
gacaaaatgctaaactctgcctggatccaccaatcgcttcgggaagggcttctcctgccc
cagtcgagtttcgtctga
DBGET
integrated database retrieval system