Demequina sediminis: GCM25873_06400
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Entry
GCM25873_06400 CDS
T09136
Name
(GenBank) hypothetical protein
KO
K03086
RNA polymerase primary sigma factor
Organism
dss
Demequina sediminis
Pathway
dss02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dss00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GCM25873_06400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dss03021
]
GCM25873_06400
Transcription machinery [BR:
dss03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GCM25873_06400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_20
Motif
Other DBs
NCBI-ProteinID:
BDZ60849
LinkDB
All DBs
Position
596717..598171
Genome browser
AA seq
484 aa
AA seq
DB search
MSPDQPGTAHGTAGDGQSRQTRRSAGAPPLTSDASLPHAGSNTQKEKATTTAAASQSTGA
AKATPKRAAKAKSDAVEETAAAQPKAPTRKAAPRAAAKTAAKAPTRAELAAAKKAADADA
DAVEEVEAVDVEADVEPDADPATAGDGAAEPAAQDDDESDTRGFVIGATDDDAPVQQVMT
AGATADPVKDYLKQIGKVALLNAEQEVDLAKRIEAGLFAEETLASGEKLAPKLRRELEWI
ANDGRHAKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDYTKGYKFS
TYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLGREPTPEELARELD
MTPEKVVEVQKYGREPISLHTPLGEDGDSEFGDLIEDSEAVVPADAVGFTLLQEELSKVM
DTLSEREAGVVGMRFGLTDGQPKTLDEIGRVFGVTRERIRQIESKTMSKLRHPSRSQVLR
DYLD
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgccagatcagccgggcaccgcccacggcacagccggggacggacagtcgcgtcag
acccgacgctcggctggcgcacctcccctcacgtccgacgcttcgttgccgcatgctggc
agcaatacccagaaggagaaggccacgactaccgcagccgcttcccagtccaccggcgcc
gcgaaggcgacgccgaagcgcgccgccaaggccaagtccgacgcggtcgaggagaccgca
gccgcgcagccgaaggccccgacccgcaaggcggcgccgcgtgccgccgcgaagaccgcc
gcgaaggcgcccacgcgcgccgagctcgccgccgccaagaaggccgccgacgccgatgcc
gacgccgtcgaggaggtcgaggccgtcgacgtcgaggcggacgtcgagcccgacgccgac
cccgcgaccgcgggcgacggtgccgccgagcccgccgcccaggatgacgacgagtccgac
acgcgcggcttcgtcatcggggccaccgatgacgacgctcccgtccagcaggtcatgacc
gcaggcgccaccgccgacccggtcaaggactacctcaagcagatcggaaaggtcgcgctc
ctcaacgccgagcaggaggtcgaccttgccaagcgcatcgaggccggactgttcgcggag
gagacgctcgcgtcgggtgagaagctcgctcccaaactgcgccgcgagctcgagtggatc
gccaacgacggtcgccacgccaagaaccaccttcttgaggccaacctgcgcctggtcgtg
tcgctcgccaagcgctacaccggtcgcggcatgctcttcctcgacctcatccaggagggc
aacctgggcctgatccgcgcggtcgagaagttcgactacaccaagggctacaagttctcg
acgtacgcgacgtggtggatccgccaggccatcacccgcgcgatggccgaccaggcgcgc
acgattcgcatccccgtccacatggtcgaggtcatcaacaagctcgcgcgtgttcagcgc
cagatgctgcaggacctgggccgcgagcccacgcccgaggagctggcgcgcgagctcgac
atgacccccgagaaggtcgtcgaggtccagaagtacggccgcgagcccatctcgctccac
acgccgcttggcgaggacggcgacagcgagttcggcgacctcatcgaggactccgaggcc
gtggtccccgcggacgccgtgggcttcaccctcctccaggaggagctgagcaaggtcatg
gacaccctcagcgagcgcgaggctggcgtggtcggcatgcgctttggtctcaccgacggc
cagcccaagacgctcgacgagatcggccgcgtgttcggcgtcacgcgcgagcgcatccgc
cagatcgagtcgaagacgatgtccaagctgcgccacccgtcccgttcgcaggtgctgcgc
gactacctggactag
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