KEGG   Demequina sediminis: GCM25873_06400
Entry
GCM25873_06400    CDS       T09136                                 
Name
(GenBank) hypothetical protein
  KO
K03086  RNA polymerase primary sigma factor
Organism
dss  Demequina sediminis
Pathway
dss02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:dss00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    GCM25873_06400
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dss03021]
    GCM25873_06400
Transcription machinery [BR:dss03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     GCM25873_06400
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HTH_20
Other DBs
NCBI-ProteinID: BDZ60849
LinkDB
Position
596717..598171
AA seq 484 aa
MSPDQPGTAHGTAGDGQSRQTRRSAGAPPLTSDASLPHAGSNTQKEKATTTAAASQSTGA
AKATPKRAAKAKSDAVEETAAAQPKAPTRKAAPRAAAKTAAKAPTRAELAAAKKAADADA
DAVEEVEAVDVEADVEPDADPATAGDGAAEPAAQDDDESDTRGFVIGATDDDAPVQQVMT
AGATADPVKDYLKQIGKVALLNAEQEVDLAKRIEAGLFAEETLASGEKLAPKLRRELEWI
ANDGRHAKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDYTKGYKFS
TYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLGREPTPEELARELD
MTPEKVVEVQKYGREPISLHTPLGEDGDSEFGDLIEDSEAVVPADAVGFTLLQEELSKVM
DTLSEREAGVVGMRFGLTDGQPKTLDEIGRVFGVTRERIRQIESKTMSKLRHPSRSQVLR
DYLD
NT seq 1455 nt   +upstreamnt  +downstreamnt
gtgtcgccagatcagccgggcaccgcccacggcacagccggggacggacagtcgcgtcag
acccgacgctcggctggcgcacctcccctcacgtccgacgcttcgttgccgcatgctggc
agcaatacccagaaggagaaggccacgactaccgcagccgcttcccagtccaccggcgcc
gcgaaggcgacgccgaagcgcgccgccaaggccaagtccgacgcggtcgaggagaccgca
gccgcgcagccgaaggccccgacccgcaaggcggcgccgcgtgccgccgcgaagaccgcc
gcgaaggcgcccacgcgcgccgagctcgccgccgccaagaaggccgccgacgccgatgcc
gacgccgtcgaggaggtcgaggccgtcgacgtcgaggcggacgtcgagcccgacgccgac
cccgcgaccgcgggcgacggtgccgccgagcccgccgcccaggatgacgacgagtccgac
acgcgcggcttcgtcatcggggccaccgatgacgacgctcccgtccagcaggtcatgacc
gcaggcgccaccgccgacccggtcaaggactacctcaagcagatcggaaaggtcgcgctc
ctcaacgccgagcaggaggtcgaccttgccaagcgcatcgaggccggactgttcgcggag
gagacgctcgcgtcgggtgagaagctcgctcccaaactgcgccgcgagctcgagtggatc
gccaacgacggtcgccacgccaagaaccaccttcttgaggccaacctgcgcctggtcgtg
tcgctcgccaagcgctacaccggtcgcggcatgctcttcctcgacctcatccaggagggc
aacctgggcctgatccgcgcggtcgagaagttcgactacaccaagggctacaagttctcg
acgtacgcgacgtggtggatccgccaggccatcacccgcgcgatggccgaccaggcgcgc
acgattcgcatccccgtccacatggtcgaggtcatcaacaagctcgcgcgtgttcagcgc
cagatgctgcaggacctgggccgcgagcccacgcccgaggagctggcgcgcgagctcgac
atgacccccgagaaggtcgtcgaggtccagaagtacggccgcgagcccatctcgctccac
acgccgcttggcgaggacggcgacagcgagttcggcgacctcatcgaggactccgaggcc
gtggtccccgcggacgccgtgggcttcaccctcctccaggaggagctgagcaaggtcatg
gacaccctcagcgagcgcgaggctggcgtggtcggcatgcgctttggtctcaccgacggc
cagcccaagacgctcgacgagatcggccgcgtgttcggcgtcacgcgcgagcgcatccgc
cagatcgagtcgaagacgatgtccaagctgcgccacccgtcccgttcgcaggtgctgcgc
gactacctggactag

DBGET integrated database retrieval system