Dermacentor silvarum: 119433398
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Entry
119433398 CDS
T07348
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
dsv
Dermacentor silvarum
Pathway
dsv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119433398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsv03041
]
119433398
Enzymes [BR:
dsv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119433398
Spliceosome [BR:
dsv03041
]
Complex A
U2 snRNP components
U2 related factors
119433398
Complex B
119433398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SR-25
Talin_R4
Motif
Other DBs
NCBI-GeneID:
119433398
NCBI-ProteinID:
XP_037556506
EnsemblRapid:
LOC119433398
LinkDB
All DBs
Position
11:complement(53924242..53927924)
Genome browser
AA seq
1095 aa
AA seq
DB search
MARDKKRRRSLSRSSSSSPERISRRRRNNRSRSRDRRRRSIERHRRSRSRDRRRSRDRYR
RSRSRGRRTHSRSRSRSYSRSRSRERRSKSRDGKRSRSHDRDDKKPEQTTSAMSALAAAA
AAAAAVTGAIAAAENTTALDKNTQQQQLDLEMQKRRERIEKWRQARKKTEEAAAATLILA
MPGKKWSLEDDEEDDTGPPPPIKDDPDDEPSLPSLKKKVDPDEGDADSKAEDVEVKKEAE
QAKQEEEEEDDGIDPLDAYMMGIQNEVKQLKDKALKTDGTTASTAPEKANNKVTVIMGVA
KKKEDKKKGELMEQNVDALEYSSEEETEDLQTTMNNLQAGKSKKPVSVSIEDISYAPFRK
NFYIEVPEQAKMTPGEVEAMRAELEGIKVRGKGCPKPIRNWAQCGVSKKVLELLKKHGFE
KPTPIQAQAIPAVMSGRDIIGIAKTGSGKTLAFLLPMFRHILDQAPLEDDDGPIAVIMTP
TRELAMQITKDCKRFTKSLGLRVVCVYGGTGISEQIADLKRGAEIIVCTPGRMIDMLAAN
NGRVTNFRRTTYVVLDEADRMFDMGFEPQVMRIIDSIRPDRQTVMFSATFPRQMEALARR
ILIKPIEILVGGRSVVCKEVEQHVVILNQDDKFFKLLELLGLYQDKGSAIVFVDKQEHAD
ILLKDLMKASHNAMALHGGIDQFDRDSTIVDFKAGKVGVLIATSVAARGLDVKHLILVVN
FDCPNHYEDYVHRCGRTGRAGNKGYAYTFITEDQGRYTADVIKALELSGNPIPEDLQKLF
DEYKARQEAEGKKVRGGSGFSGKGFKFDEAESHLKTEKKKFQRAALGMQDSDDEDAEGDI
DREIESMLAPKKRIKELLPGPSVTGQAAPAQAVPGVPGAIPGVAVPLGAAAAAAAPSGTV
SEKLEMARMLACRINMTRTFSAPSMPAPEVMMTAQSATEAMMRGHYVPELPTPVISAKTI
AEQRAEKLHAKLNYQPKVIEEEPPEPPPQKERFQKYEEELEINDFPQQARWKVTSKEAMA
QISEYSEAGITVRGTYYPPGKEPKGGDRKLYLAIESTSELAVSKARAEIIRLIKEEMVKM
QHSYQPINRGRYKVL
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgacaagaagagacgccgatcgctctctcggagttcgtccagctctccagag
aggatcagccgacgccgccgaaacaaccgatcccgaagtcgtgaccgacggcgccggagc
atcgagcggcaccgacgctcccggtcgcgcgaccgccgccgatcgagggacaggtaccgt
cggtcccggtcgcgcggccgacggacccactcgcgttcccgttcgcggtcatactcgagg
tcgcgttcccgtgaacgccgttccaagagtcgtgacggcaagcgctcgcgtagccacgac
cgcgacgacaagaagcccgagcagacgacgtccgccatgagtgccctggctgccgcggct
gcggcggccgccgccgtcaccggagccatcgccgctgccgaaaacacgaccgccttagat
aagaacacgcagcagcagcaactcgacctggaaatgcagaagcgtcgcgagcgcatcgaa
aagtggcgtcaggctcgcaagaagactgaagaggcggccgccgcgactctcatcctagca
atgcctggtaagaagtggagcctcgaagacgacgaagaggacgacacgggaccgcctcca
cccatcaaggacgacccggacgacgaacccagtcttccgtcgctgaagaagaaggtggat
cctgacgaaggcgacgccgattcgaaagccgaggatgttgaggtcaagaaagaagccgag
caggccaagcaggaggaggaggaggaggacgatggcatcgacccgctggacgcgtacatg
atgggaatccagaatgaggtgaagcagctgaaggacaaggcgctcaagacggatggcacc
acggcttcaaccgcgccagagaaggctaacaacaaggttacggtaatcatgggcgttgcc
aagaagaaagaggacaagaagaaaggcgagctcatggaacagaatgtcgacgccttggag
tattcgtctgaagaggagacagaagacctgcagacgactatgaacaacctgcaggctggc
aagtcaaagaaaccggtttcggtctctatagaggacatctcatacgcaccgttccgtaag
aatttctacattgaggtgcccgagcaagcaaagatgacgccgggtgaagtggaggcgatg
cgtgccgaactggagggcatcaaggtacgtggcaaggggtgccccaaacccatccgtaac
tgggcccaatgtggggtcagcaagaaagtgttggaactgctgaagaagcacgggttcgag
aagcccactcccattcaagcgcaggccatacctgctgtgatgtccggcagggacataatc
ggcatcgcgaagactgggtcgggcaagacgctcgcattccttctgcccatgttccgacac
atcttggatcaggcgccgttggaggacgacgacggccccattgccgtcatcatgactccg
actcgagagcttgccatgcagatcaccaaggattgtaaaaggttcacaaagtcgcttggc
ctgcgtgtcgtttgtgtgtatggtggtactggcatatctgaacagattgcggacctaaaa
cgtggggcagagatcattgtctgcaccccggggcgcatgattgatatgctggctgccaac
aatggtagagtgaccaacttccgaaggaccacttatgtagtcttggatgaagccgaccgc
atgtttgacatgggtttcgagcctcaggtgatgcgcatcattgactctatacgtcccgac
cggcaaactgtcatgttttccgctacctttccacggcagatggaggctcttgctaggcgt
atcttaatcaaacctattgaaatcctggtaggtggaaggagtgttgtgtgcaaagaagtg
gaacagcacgttgtcattctcaaccaagatgacaagtttttcaaacttctggaacttttg
ggtctttaccaggataaaggcagtgccattgtgtttgttgacaagcaggagcatgcggac
attctcttgaaggatcttatgaaggcctctcacaatgccatggctctccatggtggaatt
gaccagtttgatcgcgactctacaattgttgacttcaaggcaggtaaagttggcgtcctc
attgccacgtcagtggcggcgagagggctggacgtgaaacacctcattcttgtcgtcaac
ttcgattgcccaaaccactatgaagattacgtacatcgctgtggtcggacaggacgtgcc
ggaaacaaggggtacgcttacactttcatcacggaagatcaggggcgttacactgctgat
gtcattaaggcattagaacttagcggtaaccccataccagaagatctgcagaaactcttt
gatgagtacaaagcaagacaggaggcggaaggcaagaaagttaggggaggcagcggattc
tccggtaaaggtttcaagtttgatgaggccgaatcacatctcaagaccgaaaagaagaag
ttccagagagctgcgcttggtatgcaagactccgatgatgaagacgccgaaggcgacatt
gatcgtgagattgagtccatgcttgcacccaagaagcgcatcaaggaactcctacctggt
ccctctgttactggacaagcagcgcctgcacaggctgtaccgggtgtccctggtgctata
cctggtgttgctgtcccgctgggtgcggccgctgccgccgcagctcccagcggcaccgtc
tctgagaagctggagatggcgcgcatgttagcatgtcgcatcaacatgacacggactttc
agtgcgccttccatgccagcgccagaagtcatgatgacggcgcagtcggcgaccgaggct
atgatgcgcggacattatgtgccggagcttccaacaccagtgatatcagccaagacgatt
gcggaacagcgagccgagaagctacacgccaagctcaactaccagcccaaggtcatcgag
gaagaacctccggaaccaccaccacagaaggagcgattccagaagtacgaggaggagctg
gagatcaatgacttcccccagcaagcgaggtggaaggtcacgtctaaagaagccatggcc
cagatcagcgagtactcggaagctggcatcacggtacgtggtacctactaccccccaggc
aaggagcccaagggtggagatcgcaagttgtaccttgccatcgaaagcacgagcgaactt
gctgtcagcaaagcacgggccgagatcatccgactcatcaaggaagagatggtcaaaatg
cagcattcataccagcccatcaacaggggacgttacaaggtgctgtga
DBGET
integrated database retrieval system
