Dermacentor silvarum: 119459320
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Entry
119459320 CDS
T07348
Name
(RefSeq) nuclear exosome regulator NRDE2
KO
K26109
nuclear exosome regulator NRDE2
Organism
dsv
Dermacentor silvarum
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsv03019
]
119459320
Messenger RNA biogenesis [BR:
dsv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
119459320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDE-2
TPR_14
TPR_8
TPR_12
Motif
Other DBs
NCBI-GeneID:
119459320
NCBI-ProteinID:
XP_049527617
EnsemblRapid:
LOC119459320
LinkDB
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Position
7:164211941..164297320
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AA seq
854 aa
AA seq
DB search
MIGTSVSGLGARGSEEQQPTTELLPLLCPEAADKHRSLTDRLREAPEDERAWLDLATFQD
EYVAAMEEASGVCRTLGRAKAIREKKLQVLEQGLLKTKGSVPLHLQKIQVLLECGEEARA
VKAWEELLRVHPGNSRLWLEHARFLQSETTLSGFEVAAATRGYMRALACFRDMLEGRRAT
RREPLEVEENIVEVSRQYGVFLCQAGLWERAVATFQALAELSLRCPPQLSEAPLNEALAL
LEPFWDSGAPRFGDRGALGWAHLMQLGGQAALEAATAQQGTQGEECQQLEDEIVSRQPSL
ADAWLRLESLRDLHQWQPYRPDLSSEEVTSEDPERMVLFEDVGPALFRLRQPAAKLHLFQ
AWFSLLLGMDPHKSQTGFSLAEADCFERLPGVTLRMATHFSDALSFPSGWEVRQGIADFV
HEVLSQAKPHFVEPTLGDELARLALRLARLTTTWDARKRKKCAKAWLADPGRERNLDLWT
EYGLLLVDLGQPQETLAVYEKALDMVSQPGALAGCRGDVWLLLATYLNLRLGVLWHEEEA
PIVDQKSFGRDQALLALSWFDSGRKFREVLSSRLQPSALLRAGAAIDNRCKDPAGRTAGA
VDVALWMKFFSSGIGAVSALVSEWLDACTKDEEARSTQMAVHTAFVRICTYEVRYSNARR
AALSTALLRALEDIPNAVTFMWQWVLLSTGSLGALRVRRYLDSLVQKDRSPLAWLVALCF
ELQRAHVLAKYRTPDASFTLPSCRNHVRRVLERAIELVAHRRCPLLWRLYIELELRLGTR
ESAKAIFYRALQCCPWAKVLYVDGVRHFPECLQEVVDMMVEKGIRLRAPLEELQLLLEHA
GQQPAEEEEQQPAV
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgatcgggacttctgtgtcagggctcggggcacggggcagcgaagagcagcagccgacg
accgaattgctgccccttctgtgtccggaggcagcagacaagcaccgttcgctgaccgat
cgactgcgtgaagcaccggaggatgagcgcgcctggctggacttggcgaccttccaggac
gagtacgtggcggccatggaggaggcctctggggtgtgccgcacgcttggccgagcaaag
gcaattcgtgagaagaagctgcaggttctggagcagggccttctcaagactaagggctca
gtacctctacacttacagaagatacaggtgctgttggaatgcggagaggaggctcgtgca
gtgaaagcctgggaggagctgctccgagtacacccgggaaactctcggctctggctggag
cacgcccgctttcttcagtccgagaccacgctgtcgggcttcgaggtggcggcagccacc
agaggctacatgcgggctctggcttgcttccgcgacatgctcgaggggcgcagggccaca
cggagggagcccctcgaggtggaggagaacattgtggaggtgtcgcgccagtatggagtg
tttctctgccaggctggcctgtgggagcgggcagtggccacgttccaggcactggccgag
ctgagcctgcgctgtccaccacagctgagcgaggcccccctcaacgaggccctggccctt
ctcgagcccttctgggacagcggcgccccacggtttggtgaccggggcgccctcggctgg
gcccacctcatgcagctgggtggccaggcggccctggaggcagccacagcacagcaggga
acgcaaggtgaggaatgccagcagctagaagacgagattgtaagccggcagccaagcttg
gccgatgcatggctacggctggagagcctgcgtgacctgcaccagtggcagccataccgt
cccgacctctcctcggaggaggtgacctcggaggatccagagcgcatggtgctctttgag
gacgtggggcccgctctgttccggctgcggcagccagccgccaagctgcacctgtttcag
gcctggttttcgctcctgctgggcatggatccacataagagccagactggcttcagcctg
gccgaagcagactgttttgagcggctgcctggcgttaccctaaggatggcaacacacttc
agtgatgcactgagcttcccgtcaggctgggaagtacgtcaaggcatagctgactttgtc
cacgaagttcttagccaagccaagccacactttgtggagcccaccctcggcgacgagcta
gcacgattggcactgcggttggcacggttgaccactacctgggatgctcgcaagcgcaag
aagtgtgccaaagcctggctggctgacccgggccgcgaacggaatctcgacttgtggact
gagtatggcctcttgctggtcgacctgggccagccacaggagacactggctgtctacgag
aaggcactggacatggtgtcacagcccggggcattggctggttgccgcggtgatgtgtgg
ctcctgctggccacatacttgaacctacgcctgggagtcctctggcacgaagaagaggca
ccgatcgtcgatcagaagtcgtttgggcgtgaccaagcgctgttggcactctcgtggttc
gactccggtcgcaagtttcgggaggtgctttctagtcggctgcagccatcggcacttctc
agggcaggtgctgccattgataaccgctgtaaagaccctgctggccggactgccggtgcc
gtagatgtggccctgtggatgaagtttttttcctcgggaatcggcgctgtgtctgcactc
gtaagcgaatggcttgatgcttgcacgaaggatgaggaggcgaggtccacacagatggct
gtgcacactgcgtttgtacgcatctgcacctatgaagttcgctacagcaatgcacggagg
gctgctctgtccacagccctgttgcgggcacttgaagatattcccaatgccgtcacgttt
atgtggcagtgggtgttgttgtccactggatccctgggagctttgcgtgtccgcaggtac
ttggacagcctggtgcagaaggatcggtcgcccctggcttggcttgtggcgctctgcttc
gagctgcagagggcacatgtgctggccaagtaccgcacacccgatgcgagcttcaccttg
cccagttgccgcaaccatgtgcggcgagttctggagcgggcgatcgaactggttgcccac
aggcgctgccctcttctctggaggctctacattgagctagagctgaggcttggaacgagg
gagtcggcaaaggcaatcttttacagagcccttcagtgctgtccatgggccaaggtcctg
tacgtggacggtgtgcgccacttccccgagtgcctgcaggaggtggtcgacatgatggtg
gagaaaggaatccggcttcgtgcacccctcgaagagctgcagctgctcctcgaacatgcc
ggtcagcagccggcagaggaggaagagcagcagccggcagtctaa
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