Deefgea tanakiae: K4H28_07075
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Entry
K4H28_07075 CDS
T08586
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
dtk
Deefgea tanakiae
Pathway
dtk00540
Lipopolysaccharide biosynthesis
dtk01100
Metabolic pathways
dtk01250
Biosynthesis of nucleotide sugars
Module
dtk_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
dtk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
K4H28_07075 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
dtk01005
]
K4H28_07075 (rfaD)
Enzymes [BR:
dtk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
K4H28_07075 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
dtk01005
]
Core region
K4H28_07075 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
DapB_N
NAD_binding_10
Ldh_1_N
KR
Motif
Other DBs
NCBI-ProteinID:
QZA79151
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Position
complement(1504973..1505974)
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AA seq
333 aa
AA seq
DB search
MSIVVTGAAGFIGSNIIKALNERGEADIIAVDDLTKGDQFRNLADLKIAHYLDKTDFIEE
LAAGAFDGAISAIIHQGACSDTMEHNGKYMMDNNYQYTLALFEWCQAEEVQFLYASSAAT
YGNGDNGFIESPDCEQPLNVYGYSKLLFDQVLRNRIANGEITAQVAGFRYFNVYGPREWH
KERMASVAFHHFNQYQATGKVKLFGEYGGYPAGGHTRDFVSVEDVVKVNLWFLDNPEVCG
IYNVGTGHSQPFNDIAITAVNTCRGAAGQTALSLEELLAEGILEYIEFPDALRGKYQCFT
EADLTLLREAGYGEKFLSVQDGVRRYVQALLSN
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgagtattgtagttaccggtgcagctggttttattggctcgaatataattaaagcgctc
aatgagcgtggtgaagccgatattattgcggttgatgacttaactaaaggtgatcaattt
cgcaatttggccgatttgaaaatcgctcattatttggataaaacggatttcatcgaagaa
ctcgctgcgggtgcatttgacggcgcgattagcgcaatcattcatcaaggcgcttgctca
gatacgatggagcacaacggtaagtatatgatggataataactatcaatatacgctggct
ttgttcgaatggtgccaagccgaagaagtacagtttttgtatgcatcttctgccgcgacc
tatggcaatggtgataacggctttattgagtcgccggattgtgaacaaccattaaatgtc
tatggttactcgaagttgttgtttgatcaagtgctgcgtaatcgcatcgcgaatggtgaa
attacagcgcaagtggcgggattccgctattttaatgtatatggtccacgcgaatggcat
aaagagcggatggcttcagtggccttccatcactttaatcaataccaagcgaccggcaaa
gtaaaattatttggcgagtacggtggctatccagctggtggtcacacgcgtgatttcgtg
tcggttgaagatgtcgtcaaagtaaatctgtggtttttggataatcccgaagtctgcggc
atttacaatgtaggtacagggcattcacagccttttaatgatattgctatcactgcggtt
aatacctgccgaggggctgccggacaaactgcgctatcgttggaagagctgttggcagaa
ggtattttggaatacattgaatttcctgatgcgttgaggggcaagtatcaatgtttcaca
gaggcggatttaacactactgcgtgaagctggatacggcgaaaaatttctatcagtacaa
gacggcgttcgccgctatgtacaggctttgttgtcaaattag
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