Deefgea tanakiae: K4H28_07705
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Entry
K4H28_07705 CDS
T08586
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
dtk
Deefgea tanakiae
Pathway
dtk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dtk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
K4H28_07705 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dtk03400
]
K4H28_07705 (xseA)
Enzymes [BR:
dtk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
K4H28_07705 (xseA)
DNA repair and recombination proteins [BR:
dtk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
K4H28_07705 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
TetR_C_2
Stathmin
Motif
Other DBs
NCBI-ProteinID:
QZA79269
LinkDB
All DBs
Position
1641531..1642892
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AA seq
453 aa
AA seq
DB search
MNTDLSIAQSNVVSVTQLNRRVRTLLESGLPQLWVAGEISNFKRYDSGHCYFSLKDAGAQ
VRCVMFRNRAGLLDFQPREGLQVEARVVVTLYEARGDFQLTVEAMRPAGLGALFERFEAL
KKQLATEGLFDQDNKRALPKFPKAIGIVTSPAAAALRDVLTTLARRTPNTPIILYPTPVQ
GLDAAPQIAKAIRTASERDEVDVLIVCRGGGSLEDLWSFNEEIVARAIAACNMPVVSGVG
HETDFTIADFAADLRAPTPTAAAELVSPNRQELLNLLHHQQQRLVRAFERDLHNKMLQLD
QLGRRLQHPGQKLARQAEQLQYLRQRLQHSLQHQLQQRSQKLLRLRMSLSHHKPNFQRSH
LQLEQLQQRLQRAMTRQIEVKQQHIKQATLKLEPWNPQAVLARGYALVSRSDGGLVRHAT
AVRAGETLAVQFADGNITVNVNQGVQQQHELPI
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
gtgaatactgatttgtcaatagcacaaagcaatgtagtttctgtcacacaactaaatcga
agggttcgcaccttgttagaaagcggcttgccgcagctctgggtagcgggtgaaatttca
aattttaagcgttatgactcagggcattgttacttcagcctcaaagacgcgggcgcgcaa
gtgcgatgcgtgatgtttcgtaatcgggctggattacttgattttcagccgcgcgaaggc
ttgcaagtcgaggcgcgcgtcgtcgtgactttatacgaggcgcgtggcgattttcaactt
accgttgaagcgatgcgccctgctggccttggcgcactgtttgagcgctttgaagcatta
aaaaaacagctcgctacggaaggtctgtttgatcaagacaataaacgcgccttgccaaaa
tttcccaaagcgattgggattgtcacttcccctgccgccgcggccttgcgtgacgttctc
accacgctggcacgccgcacgcccaatacgccgattattttgtatccaacgccagtgcaa
ggcttggatgcagcgccgcaaattgccaaagccatccgcaccgcgagcgaacgtgatgaa
gtcgatgtactgattgtgtgccgtggtggcggtagcttggaagacctctggtcgtttaac
gaagaaatcgtcgcccgcgcgattgccgcctgcaatatgccggtggtcagcggtgtcggc
catgaaaccgatttcacgattgccgattttgccgccgatctgcgcgcgcctacgccgact
gccgcagccgagttggtcagcccgaatcgacaagaattactcaatttgctgcatcatcag
cagcaacgcttggtgcgggctttcgagcgagacttacataataagatgttacaactggat
caactcggccgccgcttgcaacatcctgggcaaaagctcgctcggcaagcggagcaatta
cagtatttacgccaacggctacagcacagcctgcagcatcaattacaacagcgcagccaa
aaactactgcggctacgcatgagcctgtcgcatcacaaacccaactttcaacgcagccat
ttgcagctggagcaacttcagcagcgtttacagcgcgcgatgacgcggcaaattgaagtg
aaacagcagcacattaaacaagctacgctcaaactcgaaccttggaacccacaagcggtc
ttagcccgtggctacgccttagtcagccgcagcgatggcggcttggtacgccatgccacc
gcagttcgcgcaggcgaaacattggcggtgcaatttgctgatggcaacatcacggtcaat
gtgaatcaaggcgtgcagcagcaacatgaactgccaatttaa
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