KEGG   Delftia tsuruhatensis: BI380_26750
Entry
BI380_26750       CDS       T04496                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
dts  Delftia tsuruhatensis
Pathway
dts02020  Two-component system
Brite
KEGG Orthology (KO) [BR:dts00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BI380_26750
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dts03021]
    BI380_26750
Transcription machinery [BR:dts03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BI380_26750
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 HTH_23 Sigma70_r4 HTH_24 HTH_28 HTH_5 HTH_29 HTH_IclR GerE HTH_40 HTH_36 MarR_2 MarR HTH_AsnC-type HTH_11 HTH_10 Xre-like-HTH Sigma70_ECF HTH_38
Other DBs
NCBI-ProteinID: AOV06098
UniProt: A0A1D8JBM1
LinkDB
Position
5834868..5835389
AA seq 173 aa
MPAADRALVPDVATLYSDHHGWLLGWLRKRLGNAFDAADLTQDTYVRLLGRSGAEIQAIR
EPRALLMTIAQGLAANLYRKRCVEQAYLDALALMPEAVAQSPEHRAIVLQTLVEVDRLLA
LLPLPVRQAFLLSQIDGMRQADIAAELGLSVPTVRRHIARAVVQVCFLDDDGA
NT seq 522 nt   +upstreamnt  +downstreamnt
atgcccgccgccgaccgcgcccttgttcccgatgtcgccactctctactccgaccaccac
ggctggctgctgggctggctgcgcaagcgcctgggcaatgcctttgatgcggccgatctg
acccaggacacctatgtgcgcctgctgggccgcagcggcgccgagatccaggccattcgc
gaaccgcgtgccctgctgatgaccattgcccagggtctggccgccaacctctaccgcaag
cgctgcgtggagcaggcctatctggacgccctggccctcatgcccgaggctgtggcccag
tcccccgagcaccgcgccatcgtgctgcagaccctggtcgaggtggaccgcctgctggct
ctgctcccactgcccgtgcgccaggcctttttgctgtcgcagatcgacggcatgaggcag
gccgacatcgcggctgaactgggcctttccgtgcccaccgtgcgccgccatatcgcgcgg
gccgtggtgcaagtctgctttctggacgacgacggcgcatga

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