Dictyoglomus turgidum: Dtur_1511
Help
Entry
Dtur_1511 CDS
T00800
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
dtu
Dictyoglomus turgidum
Pathway
dtu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dtu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Dtur_1511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dtu03400
]
Dtur_1511
Enzymes [BR:
dtu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Dtur_1511
DNA repair and recombination proteins [BR:
dtu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
Dtur_1511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
TRCF
UvrB_inter
CarD_TRCF_RID
ResIII
UB2H
Motif
Other DBs
NCBI-ProteinID:
ACK42785
UniProt:
B8E2E1
LinkDB
All DBs
Position
1521401..1524580
Genome browser
AA seq
1059 aa
AA seq
DB search
MSILLEKIIKSSEFNTLEKVINSKNRLKIFGIYKGIYPLFLLYLKRYEKPVLWITNNEED
LNIWEDLQEDLEISILPSYVHLPYERPLRSPQIQGKRLRAISNIIYDKNFSIIASLKSLI
YPIIPKDVLKERIIKIRIGEEIAREKIEKYLAENFYQRLPQVEKIGDYSIRGGILDIFSP
IYENPIRIEFFGDEITSIRFFNLEDKRSIETTKEVFITPISELIANKDEEKYFLKNKELK
KYIFSYLPPNTILIFENYDESLALIQKWTEKGLANLEKRRTKENLPEDLYLTNSLLESYT
SHYQVLDLNSKDADIAFSIYSPPSYQGTNEFFEKNIKSFVYDGWEVYISSEHQDIVRTRL
KNLNVKYLVGEKIREGFLWEKEKILVITDYEIFGKKRKRKVIRYEKGLKPKDLYLLKDGD
YVVHVNYGIGIFRGLKKLKVDELEKEFIYIEYANNSFLYVPLEEMHLIQRYVSSSPDPPQ
ISRLESRQWEETKRKVKESAKEIAEELLKIYAQREITKGFAFSPDSPLQEELEASFPYIE
TEDQIKALREIKKDMESTKPMERVLIGDVGFGKTELALRASFKAVLDGKQVAILVPTTIL
AYQHWKVFKERLEVFPVNVEILSRLKPKSEQKRIIEKIRKGEIDIIIGTHRILQKDVEFK
DLGLIIVDEEHRFGVLQKEAFKKKYPHVDILYLSATPIPRTLSMVLSGIRQFSVLETPPE
NRLPIQTFVVEYNPEIIQEGIRRELERGGQVYYVCNDIERLEKIREELSKLVPEATYAIA
HGKMDDEKLTEVMSNFYDGKIDVLVATTIIESGIDVPNANTLFVENAEHMGLAQLYQLRG
RIGRSYKQAYAYFLHAPLKKLSLESIKRLEALKEFSSLGSGLRLALRDLEIRGAGKILGK
EQHGHINSVGFYLYLQLLEEAINELKSNKEGSEKNKINCHIIHPFPAIIPEYYISQSSDR
IYYYQKLAHLEDINDIEKIKKEMEDIYGPIPDSVENLCLLSQIKFFAEKIGIEKIEISEN
QVKLTYSKGIERTLNLPKGDYRKKAQFLLQFLKDISNIK
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgtctattctgttagaaaagatcataaaaagtagcgaattcaatactcttgagaaagta
attaactctaaaaatcgtctcaaaattttcggaatatacaagggtatttatcctctattt
cttttatacctaaaaagatatgaaaaacccgttttatggataaccaataacgaagaagat
ctgaatatatgggaagatttacaggaagatttagaaataagtatattaccctcttatgtg
catcttccttatgagcgacctttaagatctcctcagattcaaggaaaaagattgagagct
atctcaaatataatttacgataaaaatttttccattattgcttctttaaaatccttaatt
tatccaattatccccaaggatgtcttaaaagagagaatcataaaaataagaatcggagaa
gaaatagctcgagaaaaaatagaaaaatacctggcagaaaatttttatcaaagattacct
caagtagaaaaaattggagactatagcataaggggtggaattctagatatattctctcct
atatatgagaatcctataagaatagaattttttggagatgagattacttctataagattt
tttaatttggaagacaaaagatctatagaaacaacaaaagaagtatttataactcccatt
tcagagcttattgcaaataaagatgaagagaaatactttttaaaaaataaagagcttaaa
aagtatatcttttcatatcttcccccaaataccatcttaatctttgaaaattacgatgaa
agccttgctctaatccaaaaatggacggaaaaaggattagcaaatcttgaaaaaagaagg
actaaagaaaatcttccagaagatttatatcttactaattctttattagaaagttatact
tcccattaccaagtattagatctgaatagtaaagatgcagacattgcattttccatatat
tcacctccctcttaccaaggtaccaatgagttttttgaaaaaaacataaaatccttcgtt
tatgatggatgggaagtatacatttcatcggaacatcaagatatcgtaaggacaaggctt
aagaatttaaatgtgaaatacttggttggagaaaagataagagagggttttttatgggaa
aaggaaaaaattcttgtaattactgattatgagatctttgggaaaaaaaggaaaagaaaa
gttataagatatgaaaaaggactaaaacccaaggacttataccttttaaaagatggcgat
tatgtggttcatgtaaactacggtataggaatatttagaggactaaaaaaacttaaagta
gacgaactagaaaaagaatttatatacattgaatatgctaacaatagctttctatatgtt
ccattagaagaaatgcatcttatccaaagatatgtatcctcctctcccgacccaccacag
ataagtagattagaatctcgccaatgggaagaaacaaaacgaaaagtaaaagaatcagcg
aaagagatcgctgaagaattactaaaaatctatgctcaaagggaaatcactaagggcttt
gctttttctcctgatagcccacttcaagaagaacttgaagcaagcttcccttatatagag
acagaagaccaaataaaagctcttagagagataaaaaaggatatggaatctacaaaacct
atggaaagagtgcttattggagatgtaggttttggcaaaacagagctcgccttaagggca
agttttaaggcagtgcttgatggaaaacaagtagcaattcttgtaccaaccacaattctt
gcttatcaacattggaaggtattcaaagaaaggttagaagtttttcctgtaaatgtagaa
atcttgagcaggttaaaacctaaatcggagcaaaaaagaataatagagaagataagaaag
ggagaaatagacataataattggaacccacagaattctacaaaaagatgtggaatttaaa
gatttgggcctaataattgtagatgaagaacatagatttggagtactacaaaaagaagcc
tttaaaaagaaatatccccatgtagatattctttatctctcagcaacgcctattccaaga
actttatccatggttctttctggaataagacaattttcagtacttgaaactccacctgaa
aatcgcttacctattcaaacctttgtagtggaatataatcctgaaattattcaagaagga
ataaggagagaattagaaagaggaggacaggtatattatgtgtgtaatgacatagaaaga
ttagaaaaaataagagaagaactatcaaaactcgttccagaggcaacttatgctatagcc
catggcaaaatggacgatgaaaaattaacagaagttatgagtaatttttatgatggaaaa
atagacgttctggttgccactaccataatagaatcaggcatagatgtccctaatgcaaat
acactgtttgtggaaaatgcagaacatatgggacttgctcagctatatcaacttcgtgga
agaattggaagatcctataaacaagcttatgcctattttttgcatgcccctctaaagaaa
ttatcccttgaaagtataaaaagacttgaagctttaaaagaattctcaagccttggatct
ggtttgagacttgccttaagagatcttgaaataagaggtgcaggaaagatccttggaaaa
gaacaacacggacatataaactctgttgggttttatttatatcttcaactcttagaagag
gcaatcaatgaattaaaaagcaataaagaaggaagtgaaaaaaataaaataaattgccat
attatacatccatttccagcaattatacccgaatactatataagtcaaagcagtgatcgt
atatactactatcaaaagttggctcatcttgaagatattaatgatatagaaaaaataaaa
aaggaaatggaagatatttacggacctattccagattctgttgagaatttatgtcttctc
tctcagattaaattttttgctgaaaaaataggaatagaaaaaattgaaatatctgaaaac
caggtaaaactaacatattcaaagggtattgaaagaaccttaaatttacctaaaggggat
tatagaaaaaaagcccaatttctactccaatttctcaaagatatctccaatattaagtaa
DBGET
integrated database retrieval system
