Duganella dendranthematis: HH213_06770
Help
Entry
HH213_06770 CDS
T06560
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
dug
Duganella dendranthematis
Pathway
dug02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dug00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HH213_06770
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
dug02022
]
HH213_06770
02035 Bacterial motility proteins [BR:
dug02035
]
HH213_06770
Two-component system [BR:
dug02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
HH213_06770
Bacterial motility proteins [BR:
dug02035
]
Pilus system
Twitching motility proteins
HH213_06770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_28
HTH_23
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QJD89833
LinkDB
All DBs
Position
complement(1457926..1459371)
Genome browser
AA seq
481 aa
AA seq
DB search
MSAHTPRSPRVLVVDDEADLRELLELTLLKMGLDVDSAATLGEARALLAGTEYQLVLTDM
RLPDGLGLELVREIAAACKNTPVAVVTAFGSADNAVVALKAGAFDYISKPVALDQLRLMV
QSALRLNAEPAAGQAPAAAPTASRLRGESAVIQALRAQIARLARSMAPIAINGESGSGKE
LAAREIHAQSSRAAQPFIAVNCGAIPEALMEAEFFGYRKGAFTGAADEREGFFQAANGGT
LMLDEVADLPLAMQVKLLRAIQERRVRKIGATAEEPVDVRIISATHKNLAQCVEQGSFRQ
DLFYRLNVIELSLPPLRERLDDLAVLTDAILARLGTFENKVVLGQGVLAALRGYSFPGNV
RELENILERALAFADDGVIEVGDLSLKGARMAEAALPLPVPSAPTAADVAIAPGAPVVTP
PLPDALPANLPDYLIQVERDIILRALAQTQFNRTQAAQLLGISFRQLRYQMQKLNIQEPE
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctcatacgccacgttcgccgcgtgttctggttgtcgatgacgaggccgatctg
cgcgaattgctggaactgaccttgctgaaaatggggctggacgtcgacagcgccgccacc
ctgggcgaagcgcgcgcgctgctggccggcacagaataccagctggtgctgaccgatatg
cgcttgccggacggcctcgggctggagctggtgcgcgagatcgccgcggcctgcaagaac
acgccggtggcggtggtgacggcgttcggcagcgccgacaacgcggtggtggcgctgaaa
gccggcgccttcgattacatctccaagccggtggcgctggaccagttgcggctgatggtg
cagtcggcgctgcggctgaacgccgaaccggcggcagggcaggcgccggccgcagcgccg
accgccagccgtttgcgcggcgagtcggcggtgatccaggcgctgcgcgcgcagatcgcc
cggctggcgcgctcgatggcgccgatcgccatcaacggcgaatccggcagcggcaaggaa
ctggcggcgcgcgaaatccacgcgcaaagttcgcgggcggcgcagccgttcatcgccgtc
aactgcggcgcgattccggaagcgctgatggaggccgagtttttcggctaccgcaaaggt
gctttcaccggcgcggccgacgagcgcgaaggcttcttccaggccgccaacggcggcacc
ttgatgctggacgaagtggccgacttgccgctggcgatgcaggtcaagctgctgcgcgcc
atccaggagcggcgcgtgcgcaagatcggcgccaccgccgaggagccggtcgatgtgcgt
attattagtgcgacccacaaaaacctggcgcagtgcgtggagcagggcagcttccgccag
gatctgttttaccgtctgaacgtgatcgagctgagtctgccgccgctgcgcgaacggctg
gacgacctcgccgtgctgaccgacgcaatcctcgcccggctcggcacgtttgagaataaa
gtggtgctggggcagggcgtgctggcggcgttgcgcggctattcctttcccggcaatgtg
cgcgaactggaaaatatcctggagcgggcgctggcctttgccgacgatggcgtgatcgaa
gtcggcgacctgtcgctgaaaggcgcgcgcatggctgaggcggcgctgccgctgcccgtg
ccgagcgcacccactgcggccgacgtggccatcgcgcccggcgcgccggtcgtcacgccg
ccgttgccggacgcgctgccggccaacctgcccgactacctgatccaggtcgagcgcgac
atcatcctgcgggcgctggcgcagacccagtttaaccgcacccaggcggcgcaactgctg
ggcatcagcttccgccagctgcgctaccaaatgcagaagctgaatatccaggagccggag
gcgtga
DBGET
integrated database retrieval system
