Duganella dendranthematis: HH213_19580
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Entry
HH213_19580 CDS
T06560
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
dug
Duganella dendranthematis
Pathway
dug00521
Streptomycin biosynthesis
dug00523
Polyketide sugar unit biosynthesis
dug00541
O-Antigen nucleotide sugar biosynthesis
dug01100
Metabolic pathways
dug01110
Biosynthesis of secondary metabolites
dug01250
Biosynthesis of nucleotide sugars
Module
dug_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
dug00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
HH213_19580 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HH213_19580 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HH213_19580 (rfbC)
Enzymes [BR:
dug01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
HH213_19580 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QJD92102
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All DBs
Position
complement(4281586..4282134)
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AA seq
182 aa
AA seq
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MNVIKTPLEGLLVLEPKVFGDDRGFFFESFNAKRFGELTGFTGEFVQDNHSRSSKGVLRG
LHYQIQQAQGKLVRATAGSVFDVAVDIRKSSPTFGQWFGIELSAENKRQVWIPPGFAHGF
VVTSDSAEFLYKTTDYWAPEHERAILWNDPAIGIDWPALEAAPLLSGKDQAASLLANAEV
FA
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgattaagacgccactggaaggcctgctggtgctggagccgaaggtttttggc
gatgaccgtggttttttctttgagagtttcaacgccaagcgttttggtgagctgaccggc
tttaccggtgaattcgtgcaggacaaccactcgcgctcgtccaaaggcgtgctgcgcggc
ctgcactatcagatccagcaagcccagggcaagctggtgcgcgccaccgccggctcggtg
tttgatgtcgccgtcgatatccgcaagagctcgccgaccttcggccagtggttcggcatt
gaactgtcggccgagaacaagcgccaggtgtggataccgcccggcttcgcgcacggcttt
gtggtgacgtccgattccgccgagttcctgtacaagaccaccgactactgggcgcctgag
catgagcgcgccatcctgtggaacgacccggcgatcggcatcgactggccggcgctggaa
gcggcgccgctgctgtccggcaaggaccaggcggcctcgctgctggccaacgccgaggtg
ttcgcatga
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