Drosophila virilis: 6623805
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Entry
6623805 CDS
T01066
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
dvi
Drosophila virilis
Pathway
dvi03022
Basal transcription factors
dvi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
6623805
09124 Replication and repair
03420 Nucleotide excision repair
6623805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dvi03021
]
6623805
03400 DNA repair and recombination proteins [BR:
dvi03400
]
6623805
Transcription machinery [BR:
dvi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
6623805
DNA repair and recombination proteins [BR:
dvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
6623805
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
6623805
NCBI-ProteinID:
XP_002048261
FlyBase:
FBgn0198704
UniProt:
B4LH90
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MADTKSGRYASSSAAISPLVQSPENLECKNFQEYLRTRQTPETLEKLYNYPPICLAVYRE
LPEIARQFVIRILFIDQPVPQAVVTSWGAQRVAKEQMEATSCLTALCVWRVTAIPGGLAA
WELSPTFKKSVRQVLLGGGKPWAMTNTLDRDSKPRDIAFLDSYAMSRWRCVLHYMVGTGS
RGGTDAEAISPDAVRILLHANLMKRDERDGITITRQGFQFLLLDTRAQVWHFMLQYLETC
EERGICLPECLSMLFQLSFSTLGRDYSSEGMNNQMLTFLQHLREFGLVFQRKRKEGRFYP
TRLALNVTNKDAAQASTSADEERMQERGYIVVETNYRVYAYTDSQLQVAVLGLFTELLYR
FPNLVVGVLTRDSVRQALRGGITAEQIVSYLEQYAHPNMKLVESAIQSKSCLPPTIVDQI
KLWEMERNRFTYTEGVVYNQFLSQNDFVTLRDYAQSINMLVWQNERTRTMVVQKNGHDDV
KRYWKKYSKSGG
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggccgatacaaaatccggccgttatgcgagcagcagcgctgctatatcccccctagta
cagagtccagagaatttggagtgcaagaactttcaggaatatctgcgcacccgccaaaca
cccgagacgctagagaagctctacaattatccacccatttgcctggcggtctatcgcgag
ttgcccgaaatcgcaagacagtttgtaattcgcatactgttcatagatcagccagtgcca
caagccgttgtcacctcatggggtgcacaacgcgttgccaaggaacaaatggaggccacc
agctgcctgactgctttgtgtgtttggcgcgtcacggccataccaggcggcctggctgct
tgggagctgtcaccaacgtttaagaagagcgttcgtcaggtgctactgggcggtggcaag
ccctgggcaatgaccaatacactagatagggactccaagccgcgtgacattgcgtttctg
gactcgtatgccatgtcccgctggcgctgtgtgctgcactatatggtgggcacgggcagc
cgtggcggcaccgatgccgaggcaatcagtccagatgcggtgcgcattctgctacatgcg
aatcttatgaagcgcgacgagcgcgatggtatcaccattacacgtcagggatttcagttt
ttgttgctagacacgcgcgctcaggtctggcattttatgctccagtatttggagacatgc
gaggagcgcggcatctgtctgcctgagtgcctgtccatgctgtttcagttgagtttctcg
acgcttggacgcgactacagctcagagggcatgaacaatcagatgttgacgtttttgcag
catctacgtgagtttgggctggtgtttcaacggaaacgcaaggagggtcgcttttatccc
acacgactggcgctgaatgtaacgaacaaggatgcagcacaggcttcaacatcggcggat
gaggagcgcatgcaggagaggggttacatcgtggtggaaaccaattaccgcgtttatgcc
tacacagattcacagctgcaggtggctgtactcggtctttttaccgagctgctctatcgc
tttcccaatctcgttgtgggtgtcctcacacgcgactctgtgcgccaagcactgcgaggc
ggcattacggccgagcaaatcgtcagttatttggaacagtatgcacatcccaacatgaaa
ctggtcgaatcagccattcaatcgaagtcctgcctgccgcccacaattgtagatcaaatc
aaactctgggaaatggaacgcaatcgtttcacatacacagagggcgttgtttacaatcag
ttcctgtcacaaaacgactttgtaacgctgcgcgactacgcccaatccataaacatgctg
gtgtggcagaatgaacgcacccgcaccatggtggtacagaagaacggtcacgacgatgtc
aagcgctactggaagaagtactcaaaaagcggcggctag
DBGET
integrated database retrieval system
