Drosophila virilis: 6632171
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Entry
6632171 CDS
T01066
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
dvi
Drosophila virilis
Pathway
dvi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
6632171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dvi03400
]
6632171
Enzymes [BR:
dvi01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
6632171
DNA repair and recombination proteins [BR:
dvi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
6632171
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
BRCT_2
RNA_ligase
BRCT
Motif
Other DBs
NCBI-GeneID:
6632171
NCBI-ProteinID:
XP_002055269
FlyBase:
FBgn0206420
UniProt:
B4M1B6
LinkDB
All DBs
Position
Unknown
AA seq
920 aa
AA seq
DB search
MDISSTIKFRDICTMMERVKVAKNMQRKELILKRYYDSFCKHRETFRLSAGLTANQLEDG
ASSFYPVLRLLIPGADTSRDNYGLQITALGRLYTRVLQLAKDSDDAIRLQHRTVSTFRDY
ADVVHAVLLPRCHNEPSNLTLKQIHEMLDIIASEDTTVKERELIRFTELASAQEQKWLIR
ILLKSMGLGIGEQRIFGLLHPLAKDVYQRCSDLARICVLLADNKLLPEAPTGNIGSSSSS
GGSNAVTKLNTFIEPFHQIRPMLCERFPGKIEELMKSDVLYLETKMDGERFQLHYARGRF
KYISRKGADYTKSFGDSYETGTLTPHLRPLLPLGMESIILDGEMMIWDTQQLRYREKGEN
TDVKHLKPERSWRPCFVVYDLLYLNGESLLDMTYAQRTYKLQELISEQQGVLQIMKGQKI
SSLEHFNTLFQQMLDSNAEGIVLKKQNSIYKPGVRVGGGWYKDKADYIEGLITEFDVLII
GGFYNRKRTFIESFLLGVLKPGGETERDEVYSIGCVANNTRQRTVLHHELRPHWHDASTE
PPPLWYHYKPNEKEGSPDVWIQPEKSVILQVKAADLTPNGAFYTPKSLHFPRTQLLRDDK
VWNECMTLQEYTELCQGQGAIKKLNKRQANLNDFTTERKRIKLTTAERNRLGLAAYEKRY
DVQPLANSSQLFEGFSFCILSGTRGYSKQQLQTLAAENGGTIVQNPLPNDPKCICIAGDL
VYLVERLMQQQPRCNDILRLDWLLRVSQKQQIELRPRDVLSATDALQTQFDKSFDKLGDS
FTDLFGSLNELQEVLLDISEVQLDSVHVDEHDLDKLEQQLLGTASYNIFAKHHACFYNRD
ADELARLLFIQRGGQLVSETELQSINLVLVCSSRLNRQDFKQWYQEHFTTHPPQAVSTDW
IRQSHRARCALPTAEFLFKF
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggacatctccagcaccataaaatttcgtgacatatgcacaatgatggagcgagttaag
gtggccaaaaatatgcagcgcaaggagctcattctaaagcgctattacgactccttctgc
aaacatcgggagacattccgactgagtgcaggtctgacggcgaaccagctagaggacggt
gccagcagtttttatccggtgctgcgtctcttaatacctggcgcggacacctcacgcgac
aactacggcctgcagataaccgccctgggacgactctacacgcgcgtcctgcagctagcc
aaagattctgatgatgcgatacggctgcagcatcgtactgtgtctacgttccgtgactat
gctgatgtggtgcatgctgtgctgctgcctcgctgtcacaatgagcccagcaacctgacg
ctcaagcaaatccatgaaatgctcgacattattgccagcgaggacacaactgtaaaggaa
cgcgaattgatacgctttacggagctggcctccgcccaggagcaaaagtggctgatacgc
attctgctcaagtcaatgggcttgggcattggcgagcagcgaatcttcggcttgctgcat
cccttggcgaaggacgtgtaccagcgctgctcagatctggcacgcatttgtgtgctgctc
gcggacaataagcttttgccggaggcaccgactggcaacatcggcagcagcagcagcagc
ggcggcagcaacgcagtcacaaaattaaacacgttcattgagccctttcatcaaataagg
ccaatgttgtgcgaaaggtttcccggcaagatcgaggagcttatgaagtcggatgtgctg
tacttagagactaaaatggatggcgaacgttttcagctgcactatgcgcgcggccgattt
aaatatatatcccgcaagggcgccgactataccaaaagttttggtgacagctacgagacc
ggcacattgacacctcatctgcgtccactgctgcccctgggcatggagtctataatactg
gacggcgagatgatgatctgggatacgcagcagctgcgctatcgcgagaagggcgaaaac
acagatgtgaaacatctaaaaccggagcgcagctggcggccctgctttgtggtctatgat
ctgctctatctgaacggggagagcctgctggatatgacgtacgcgcagcgcacctataag
ctgcaggagctgatcagcgaacagcagggcgtgctgcaaataatgaagggacagaaaata
agttccctagagcatttcaatacgctcttccagcagatgcttgactccaatgcggagggc
attgtccttaaaaagcaaaactcaatctataagcccggagtgcgtgtaggcggcggctgg
tacaaggacaaagcggattatatcgagggtcttataaccgagttcgatgtgctcatcatt
ggtggcttttacaatcgcaaacggaccttcattgaatcatttttgctgggcgtgcttaag
cctggcggcgaaacggagcgtgacgaggtgtacagcattggctgtgtggccaataatacg
cgtcagcgcaccgtgctccatcatgagctgaggccacattggcacgatgcgagcacggag
ccaccgccgctgtggtatcactacaagcctaacgaaaaggagggctcacccgacgtttgg
attcagccggagaagtccgtcatattgcaggtgaaggcagcggatttgacacccaatggc
gccttctatacacccaagtcgctgcactttccgcgcacacagctcctgcgcgatgacaag
gtgtggaacgagtgcatgacgctgcaggagtatacagaactgtgtcagggtcagggtgcc
ataaagaaactcaacaagcgtcaggcgaacctaaatgactttaccacggaacgcaagcgt
ataaagttgacgacggccgaacgcaaccgcctcggcttggctgcctatgagaagcgttat
gatgtccagcccttggcgaacagctcacagctgtttgagggcttcagcttttgcatattg
agcggcacacgcggatacagcaaacagcagctacaaacactggccgctgagaacggcggc
accattgtccagaatccattgcccaacgatccgaagtgcatttgcatagccggtgatctt
gtctatttggtggagcgtctgatgcagcaacagccgcgctgcaatgacattttacgcctg
gattggctgctgcgtgtgtcccagaaacagcagatcgagctgcgtcccagagatgtgctg
tcagccaccgatgcgctgcagacgcagttcgacaagagttttgacaagctgggtgatagc
tttacggacctgtttggcagcctgaacgagctacaggaagtgctgctggatataagcgaa
gtgcaattggactctgtgcatgtggatgagcatgatttggacaaactggagcagcaactg
cttggcactgccagttacaacatttttgccaagcaccatgcctgcttttataatcgcgat
gcagatgagctggcgaggctgctctttatccagcgtggcgggcagctagttagcgaaaca
gagcttcagagcattaaccttgtgcttgtatgttccagccgactgaatcggcaggatttt
aagcaatggtatcaggagcatttcactacgcatcccccacaggctgtgagcacggattgg
atacggcaatcgcatcgtgcacgttgcgctttgcctaccgccgagtttctgtttaaattc
tag
DBGET
integrated database retrieval system
