Daktulosphaira vitifoliae (grape phylloxera): 126904288
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Entry
126904288 CDS
T09738
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
dvt
Daktulosphaira vitifoliae (grape phylloxera)
Pathway
dvt03013
Nucleocytoplasmic transport
dvt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dvt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126904288
09122 Translation
03013 Nucleocytoplasmic transport
126904288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvt03019
]
126904288
03041 Spliceosome [BR:
dvt03041
]
126904288
Messenger RNA biogenesis [BR:
dvt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
126904288
Spliceosome [BR:
dvt03041
]
Complex C
Other components
EJC/TREX
126904288
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
126904288
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
126904288
NCBI-ProteinID:
XP_050539158
EnsemblRapid:
LOC126904288
LinkDB
All DBs
Position
Unknown
AA seq
665 aa
AA seq
DB search
MAVNKYREDLKVILKEPNLSTISAIKEIVKENNSFNLRLLFNFSDADRRSILDQVLRCYV
LDLVLSNPKNVFDICKMWTSFTIDLVRNEMCTAIMPVVILSDMFDVSTMDCCEKMFDHVE
CNVHVLKEHQFFTACKNNLLRMCNDLLRRLSRSRNTVFCGRILLFLAKFFPFSERSGLNI
VSEFNLENVTEYLNESSFDLVDDNVAPDSSIGDEYKSDIEKVNVNKNLYLKFWSLQDYFR
NPNQCYKPEHWKLFTTHTDFIFSTFQSHKLEHVSRMDNGDQVIHYFPKYLTNHKLLELQL
SDVNFRRYILIQFLLLFQYLNAPVKFKPDNYKLKFDQQEWIKNATNIVYDLINTTPPDGV
NFSEVVKNILKREEQWNKWKNDGCPEVTKRPICDNNDSDMPTTKRRPRRNLGDVIKNMTV
NNKVFLGDPELTKLWNFKPNNLEACKGPERDFLPSFDTFFQEAFEQLDPELCIESQFRKV
NDGNFGWRALRLLARKSPHFFAQSNNPIHKLSEYLENMIKKTMSKEKQMPVNQGSDKRVS
PSKELKKESLAESEEVDITDCINDENENENNDEIIEDKNKIPKHILNQVAEKIGDRWNLF
AEKVGYQPDEIEFVKSIRTTPLDQALYLLEVWIEDVENPKPEDLIYILEEIQLIDAAKIL
KSLSS
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggctgttaataaatatagagaagatttaaaagtgatattaaaagaaccaaatttatca
accataagtgctattaaggaaatcgtaaaagaaaacaattcttttaatctcagattatta
ttcaatttcagtgatgctgacagacgatcaatattagatcaagttctaaggtgttacgtc
ttggacttggtattatcaaatccaaaaaatgtatttgatatttgtaaaatgtggacatca
tttacaattgaccttgtacgaaatgaaatgtgcactgctataatgccagttgttatattg
tctgatatgtttgatgtttcaacaatggattgttgtgaaaaaatgtttgatcatgtagaa
tgtaatgtacatgtgctaaaagagcatcaattttttactgcttgtaaaaacaatcttctt
cgtatgtgcaatgatcttttgcggcgtttatctagatcacgcaatactgttttttgtggt
cgtattctattattcttagcaaaattttttccattttctgaaagatcaggtttaaacatc
gtaagtgagtttaatttagaaaatgttacagaatatttaaatgaaagtagctttgaccta
gttgatgataatgtagcacctgattcaagcattggtgatgaatataaatctgacattgaa
aaagtaaatgttaacaaaaatctttatcttaaattttggtcactgcaagattacttcaga
aatccaaatcaatgttacaaacctgaacattggaaattatttacaacacacactgatttt
attttttcaactttccaaagtcataaattagaacatgtcagtagaatggacaatggagat
caagttattcattattttccaaaatatttaacaaaccataaacttttagagctccaatta
agtgatgttaacttcaggcgttacatccttatacaatttcttttactatttcagtattta
aatgcaccagtaaaatttaaaccagacaattacaagttaaaatttgatcaacaagaatgg
attaaaaatgctacaaatattgtctatgatcttattaatacaacacctcctgatggagtt
aatttttcagaagtagtaaaaaacatattaaaaagagaggaacaatggaataaatggaaa
aatgatggatgtccagaagtcaccaaaagacccatatgtgacaacaatgattctgatatg
cctactactaaacgtaggcctcgcaggaatttgggagatgttataaaaaatatgactgtt
aataataaagtttttctgggagatcccgaattaactaaattgtggaatttcaagcctaat
aatttggaagcatgtaaaggtcctgaaagagattttttaccatcatttgatacatttttt
caggaagcatttgaacagttggatcctgaactttgtattgaaagtcaattcagaaaagtg
aatgatggaaatttcggatggcgtgcattaagacttttagcacgtaaaagtccacatttt
tttgctcaaagtaataatcctattcataaattatcagaatacttagaaaatatgattaaa
aaaactatgagtaaagaaaaacagatgccagtaaatcaaggatctgataaaagagtttcc
ccaagtaaagaattaaaaaaagaatccttagctgaatctgaagaagttgatataactgat
tgtataaatgatgaaaatgaaaatgaaaacaatgatgaaataatagaagataaaaataaa
attccaaaacacatccttaaccaagtagcagaaaaaataggagatagatggaatttattt
gctgaaaaagttggctatcaacctgatgagattgaatttgtaaaaagtattaggactaca
ccattagatcaagcactttatttgttagaagtatggattgaagatgtagaaaaccctaaa
ccagaagatcttatttatattttagaagaaatacaattaattgatgcagctaaaatatta
aaatcattaagttcttaa
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