Daktulosphaira vitifoliae (grape phylloxera): 126908294
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Entry
126908294 CDS
T09738
Name
(RefSeq) regulator of nonsense transcripts 1 homolog
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
dvt
Daktulosphaira vitifoliae (grape phylloxera)
Pathway
dvt03013
Nucleocytoplasmic transport
dvt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dvt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126908294
03015 mRNA surveillance pathway
126908294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvt03019
]
126908294
Enzymes [BR:
dvt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
126908294
5.6.2.5 RNA 5'-3' helicase
126908294
Messenger RNA biogenesis [BR:
dvt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
126908294
mRNA cycle factors
Common to processing body (P body) and stress granule
126908294
BRITE hierarchy
Motif
Pfam:
AAA_12
AAA_11
AAA_30
AAA_19
ResIII
AAA_22
SLFN-g3_helicase
DEAD
ATPase
AAA_16
nSTAND3
Helicase_RecD
UvrD-helicase
P2
Ribosomal_S13_N
AAA_7
AAA
SRP54
UvrD_C_2
AAA_6
PhoH
HisKA
HerA_C
NTPase_1
Motif
Other DBs
NCBI-GeneID:
126908294
NCBI-ProteinID:
XP_050546166
EnsemblRapid:
LOC126908294
LinkDB
All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
MAMYCAVVITLLKLIDHRTLFEKTETKVIKINELNAEDDKLPLPCSPHSTVPPTNIPCVF
SSSKQYGHFFQPLISAECSYNLKLGEKHSFECKIVSSQNYNKKSKVRFHMNSKNNVFVVD
EELWISSPKMTNAIKGIVTNFDQFMSVVDVEVNFSIDLPIGTPATLKKSFDKTPYTRMEA
ALATFSYKYESVSPEVRSMLLGRQQQHSPERDENLTDNSLLAPNLPGLNESQLSAVSHAL
RTPVSLIQGPPGTGKTVTCANIVYNLSKSGTVLVCAPSNNAVDNLANAVAKTGIDVVRLV
KKTKETVKSDLSNIYLSEQIKKLAGHSEFKTLQGQIDQGVELSPKERRDYNYLRRKAEID
CLANCRVVCTTCSGAGDNRLEKINFSSVVVDECAQGLEPECIIPITHGAKKVVLIGDHCQ
LGPVVTCPDTRNGGLHRSLFERLVAAGLQPFRLTVQYRMHPEISEYASQTMYESTIRNGV
TCSDRTGSIDFTWPNPNVPMVFYSSDANERKSRSGTSFLNYGEAKVVEQLVAKLLSKGAT
PNQIGVITPYEGQRSLLKQILNKNKGVEVSSVDAFQGREKEYIIISCVRSNERNVVGFLN
CVRRLNVALTRAKFGLFLVGNANFLVKNPTWKSLLRYYDDRNLIVEGTVDDMRTAHIKFD
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgtattgtgctgttgtcataacactgttgaaacttattgatcaccgtacactt
tttgagaaaacggaaacaaaagtcataaaaattaatgaactaaacgctgaagatgataaa
ctaccactgccatgttctccgcattcaactgtccctccaacaaatattccctgtgtattt
tcttcgtcaaaacaatatgggcatttttttcagccattaataagtgctgaatgctcgtac
aatttaaaactgggcgaaaaacattcgtttgaatgcaaaatcgttagctctcaaaactac
aataaaaaatcaaaagtacgttttcatatgaatagtaaaaataatgtatttgtagttgac
gaagaattatggatttcaagtccaaaaatgaccaacgccataaaaggaattgttacgaac
ttcgaccagttcatgagcgttgttgatgtagaagtaaatttttcaatcgacttgccaatt
gggacaccggcaactttaaaaaagtcatttgataaaaccccttacactcggatggaagcg
gcacttgctactttttcttacaagtacgaatctgtttcacctgaagtaagatcaatgttg
ctcggacgtcaacaacaacattcacccgaacgtgatgaaaatctgacagataacagccta
ttagctcccaatttacctggtttgaatgagtcacagctgtctgctgtgagccatgcccta
cgcacgccagtttctctaatccaagggcctcccggtactggaaaaacggttacttgtgcc
aatattgtatacaatctgtccaagtccggaaccgtattagtttgtgcaccgtcgaacaac
gctgttgataacttggcaaatgccgtggctaaaacaggcatcgatgtcgtgagacttgtg
aaaaaaacgaaagagacggttaaaagtgatctttcaaatatatatcttagtgaacaaatt
aaaaagcttgctggtcattcggaatttaaaactcttcaagggcagattgatcaaggtgtc
gagttgagcccaaaagagagaagggactacaattatctgagaagaaaggcggaaatcgac
tgtctagcgaattgtcgagtggtgtgcacgacttgctccggcgccggcgacaaccgttta
gaaaaaatcaatttttcttcggtggtcgtggatgaatgcgctcaaggcttagaaccggaa
tgcatcattccaatcacccacggagccaaaaaagtggtgttaataggtgaccactgtcag
ttggggccggttgttacgtgtccggacactagaaacggaggtctgcatcgttctctgttc
gagagattggtagctgctggcctacaaccatttcgtttaactgtacagtacagaatgcac
cccgagatcagcgagtacgcttcacaaactatgtacgagagtacgattaggaacggcgta
acttgtagcgaccgaactgggtcgattgatttcacgtggcctaacccaaatgtgccgatg
gtattttactcttccgatgccaacgaacgaaaatcgcgatcgggcacgtctttcttgaac
tatggagaggcgaaagttgttgaacaactagtagccaaactccttagcaaaggagctact
ccaaatcaaattggtgttataactccatatgaaggacagcgatcacttttgaaacaaatt
ctaaacaagaacaaaggggtggaagtcagtagtgtggacgcttttcaaggccgtgaaaag
gagtacattattatatcgtgtgtccgctcgaacgagagaaacgtcgtaggtttcctgaac
tgtgtccgtcggctaaatgtggcacttacgcgtgcaaagtttggtctttttttagttggt
aacgctaactttttggttaaaaaccctacgtggaaaagtttactacggtattatgacgac
agaaatttgattgtggaagggacagttgatgatatgcgtacagcacatattaagtttgat
taa
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