Diabrotica virgifera virgifera (western corn rootworm): 114325105
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Entry
114325105 CDS
T09922
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114325105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dvv03041
]
114325105
Enzymes [BR:
dvv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114325105
Spliceosome [BR:
dvv03041
]
Complex A
U2 snRNP components
U2 related factors
114325105
Complex B
114325105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
114325105
NCBI-ProteinID:
XP_028128845
EnsemblRapid:
LOC114325105
UniProt:
A0A6P7F5X8
LinkDB
All DBs
Position
5:243344280..243356237
Genome browser
AA seq
1028 aa
AA seq
DB search
MVRQTRDRSRTPERKRRRSRSKSKDRSKPSRYRRSRSRERESRDTRRRSRSRSRERRDRD
RERRSYSRERERERDRRDKERRVEKISRRKSRSRSKEKPKVDDTGLSFDPANLDKEEEQK
KLEMEMVKRRERIERWRAERKKKEQENLKREASKVKSEPDTETIIKKWSLEDDSEDEDKN
DKMEVKEETKSSGDSQSNDASDPPSVSSTPMVVPAKEEVKAEDEVDPLDEYMKEVQAEVR
KINKFDVNKKPGEATQKKGALVIVTGVAKSKGNVKKGELMEQNQDGLEYSSEEEQEDLKD
TAANIANKQKKELARIDHNNIVYISFRKNFYVEVPEIAKMTHEEVEAYKEELEGIRVKGK
GCPKPIRTWAQCGVSTKELNILKKLNFEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTLA
FLLPMFRHILDQPQLEDTDGPIAIIMTPTRELCMQIGKDIKKFTKSLNLHAVCVYGGTGI
SEQIAELKRGAEIIVCTPGRMIDMLAANSGKVTNLRRVTYIVLDEADRMFDMGFEPQVMR
IIDNVRPDRQTVMFSATFPRQMEALARRILQKPIEVQVGGRSVVCKDVEQHVVILEDDQK
FLKLLELLGIYQELGSIIVFVDKQENADILLKELMRAAYNCMSLHGGIDQFDRDSTIVDF
KNGKVKLLVATSVAARGLDVKQLILVVNYDCPNHYEDYVHRCGRTGRAGNKGFAFTFITP
EQARYAGDLIKAFELASVPVPESMRTLWENYKTKLESEGKKVHTGGGFSGKGFKFDESEA
AAVNEKKKFQKAALGLADSDDEDLEHDIDQQIESMFATKRTVKEIKAPIGIVNPNALGAG
VTAVDKLELAKRLASKINLSKSVILDTKFATQQAAESILKGRGPQPAITPKTVAEQLAAK
LNTKLNYQPKDDDDEDRNMDDDQTFRKYEEELEINDFPQQARWRVTSKEALAQISEYSEA
GITVRGTYVPTGKNPPDGERKLYLAIESTSDMAVSKAKAEITRLIKEELLKLQTAGHHTF
NKARYKVV
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgacaaaccagagatcgaagtagaacacccgaaagaaaaagaaggaggtcgaga
tcaaaaagtaaagatagatcaaaaccgtcccgatatagaagaagccgatccagggagagg
gaatccagagatacacgtcgaagaagtagatctagatcaagagaaagacgagacagagat
agagaacgaaggtcttacagcagagaaagagaacgtgagagagatcgtagggataaggaa
agaagggttgagaagatttcaagaagaaaatcaagatctagatcaaaggaaaagcccaaa
gtagatgatactggattatcttttgatccagctaatctggataaagaggaagaacaaaag
aagctggaaatggagatggttaaaagacgagaacggatagaaagatggagagctgagaga
aagaaaaaggaacaggagaatttaaagagagaagccagtaaagttaaatccgagcctgat
acagaaaccattatcaaaaagtggtcactggaagatgattctgaagatgaagacaaaaac
gataagatggaagttaaggaagaaactaaatcttctggtgattcccagtcgaatgatgct
tctgatccaccatcagttagttccacacctatggtggtgcctgctaaggaggaagttaaa
gcagaagatgaagtggatcccctggatgaatatatgaaagaggttcaggctgaggttcgc
aaaataaacaaatttgatgttaataaaaaacctggagaagctacccagaagaaaggagcc
ttagttatagtaactggagttgccaaatcaaaaggtaatgtcaaaaagggggaattaatg
gagcagaatcaagatggactggagtattcttcggaagaagagcaagaagatctcaaagat
actgctgcgaatatagcaaacaaacagaaaaaggaattggccagaattgatcacaataac
atagtttatatttcttttagaaaaaacttttacgtcgaagtgcctgagattgccaaaatg
actcacgaagaagtggaagcgtacaaagaagaattggagggtataagagtgaaaggaaaa
ggttgtcccaaacctattagaacatgggctcaatgtggggtttcgacaaaagaactgaat
attcttaaaaagttaaactttgaaaaaccaacaccaattcaagcccaagctattcctgct
attatgtctggaagggacttaataggtattgctaaaactggtagcggtaagacattagcc
ttccttctaccaatgtttagacatatccttgaccaaccccaattggaagatacagatgga
cctattgctatcatcatgactccaactagagagctctgtatgcaaattggaaaggatata
aagaagttcacaaagagtttaaacttacatgcagtttgtgtctatggtggtactggaata
tctgaacaaatagcagaattaaagcgaggtgctgaaatcattgtttgtactcctggtaga
atgattgatatgttggccgccaacagcggtaaagttaccaacttgagaagggttacttat
atagtattggacgaggctgatagaatgttcgacatgggttttgaaccacaagtaatgaga
attatagataatgttaggcctgaccgtcagactgtaatgttcagtgctacctttccccga
caaatggaagcattagcaagaagaatattgcagaagccgatagaagtacaagttggagga
agatctgttgtttgtaaagatgtagaacaacatgttgtaattttggaggatgatcaaaag
tttttgaaactcctcgaattactcgggatttaccaagaacttggtagtataattgttttt
gtggacaaacaagaaaacgctgatattttattaaaggaactaatgagagccgcatacaac
tgcatgagtctgcatggtggcatagatcaatttgacagggattcaacaatcgttgacttc
aaaaatggcaaggtaaaattacttgttgctacgtctgtagctgctagaggtttagatgtg
aaacagttaattttagttgttaactatgactgtccaaaccattatgaagattatgttcat
cgatgtggaagaactggcagagctggaaacaagggatttgcttttactttcataactcct
gaacaagctagatatgctggagatctcataaaagcttttgaattggcttcagtgcctgtt
ccagaaagtatgaggactttatgggaaaattataaaaccaagcttgaatctgaaggaaag
aaagtacacactggtggaggcttcagtggaaaagggttcaaatttgatgaatctgaagct
gcagctgtaaatgagaagaagaaattccaaaaagctgctttaggtttggcagatagtgac
gatgaagacttagaacatgacattgatcaacaaatcgaaagtatgtttgctactaaaaga
actgttaaagaaatcaaagctcccattggtattgttaatccaaatgcccttggtgctggt
gtaacagccgtagataaacttgaattggccaagagattagcttcaaagatcaacttatca
aagagtgtcattctggatactaaatttgcaacccaacaagcagctgaatctatacttaaa
ggccgtggtcctcagccagctataacacctaaaacagtagctgagcaactcgctgctaaa
cttaacaccaaactgaattatcaaccaaaagatgatgatgatgaagaccgtaacatggat
gatgatcaaacgtttagaaaatacgaagaggaactggaaattaatgatttccctcaacaa
gcaagatggagagtcacatctaaagaagctttagcacaaatttctgaatactcggaggca
ggaattactgtaagaggtacctatgtacccactggcaaaaatccccctgatggagaacgc
aaactatatcttgcaattgagagtacttctgatatggctgtatctaaggctaaggctgaa
attacacgtttgattaaagaggaattactcaaactacaaactgcagggcatcatacattt
aataaagctaggtataaggttgtataa
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