Diabrotica virgifera virgifera (western corn rootworm): 126886824
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Entry
126886824 CDS
T09922
Name
(RefSeq) protein transport protein Sec16B isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dvv04131
]
126886824
Membrane trafficking [BR:
dvv04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
126886824
BRITE hierarchy
Motif
Pfam:
Sec16_C
Sec16
Motif
Other DBs
NCBI-GeneID:
126886824
NCBI-ProteinID:
XP_050509847
EnsemblRapid:
LOC126886824
LinkDB
All DBs
Position
6:complement(249905114..250019872)
Genome browser
AA seq
1843 aa
AA seq
DB search
MSWMKRRGPSTPSPAPAPAVPMYNPNQHSATQETQWQNQPVQNNWYQGQQHAQYQPVPKQ
ENTNPPQQNYWQQQQHNPLSYNQNSQYNQHQYQNQQHTGYVQNNSGYEQQHYSNVQYSQL
NNQNNVYGTGTQSGQQQTGEDPWNWSWGDEDNSNVQPTPQATITPNQTGGQTDGSFGNLD
TWNWPAQEAKNPVKNEEPTDTHELFPKIGLVAKISPKSDTDTDISKLHPLQDHLTVTGKR
SKLETPQWSTESQMSQESSDDILHTSESDKSHMMSRSSTISHSPISGHDLIAQNLDEPPV
KNDVYETKEMMSNVRLNPTPPSPKTLQGPPPLPTSSIADDPRNPYKRTTTLSHTSASRFR
ASNITPPDTRQNVYQPTFHNQQINLENADSSEPIAMSDPDHSQSVQKIKLGHKLDNNEAP
MNDRNQYLETGQLSEVNYNDRMNEQTSEREDQQIYDQEGLENITDAYPPPGLRRMVPGQL
EQAEPTSNVPNFTDEPPPGLSRMVLGQTESAAPTTLGTVAQNVDLLSQFDTSGPPEGLRR
MIPGESSSPESSLRIQQQNREDNESEPEFSQLTQHTSQPRSATIGADTPPAVNNPIASQP
SANNISRARLENGTNVPTRSSSVEPDNKRRDSIEGEPQEQEISNITNSVRNMTVGENLTD
GHVSNNSLPDPVPRRQSRQESSDSDRESRKPPRGPSRDKKSAERTTKRDRDRERDRDREK
DRDKSRRDRERYSPDNYRDKKYERRRYRDRRYEDDTDYYSDKEKEKGFDEWDRDYDRKYN
SLRKDKEKERRRMERDPRDYNRRDYYYGSRYGDDYENEQRSRPSSRSDSLHESYRARDKD
QDRDRRNRDREREKYRSRRDPRDAYNYQGYSYDPFNPYYQQYQYYENLRRTNPQAYAEWY
RKYYQQATSHSASYGGEDRASVHSGRSSANEELAKDRYTRQSFYSQMSSTQIGGYYRDTH
SHTHSQYGHDASSYSRPFDQTDSLLALDDTTAASQRLTPAKFTMAHIKASIASGKLLRIL
PHYPIDGQPAVVEICSTSSFLANDEEFQELSQFPGPLVKGVTHKKTIIEYCENKIRNAIA
GQKIDDVESYILMWELLILLIRQNGMVVGADIAELLLQNRREIPPPRAASVISSLSSNNG
DINHSSEASNHIVSENTGSLLSVLKEEEITNKFREFLLYGSGKEALEWAMKHSLWGHALF
LASKLDKRTYANVMMRFANGLTMNDPLQTLYQLLSGKMPAAVTCVSDDKWGDWRPHLAMI
LSNSSQRPELNCKAITTLGDTLRNRGSLYAAQFCYLMAEVGFGKYDNPDTRLVLLGADHS
KPYPTFATNEAIHMTEIYEYACGLNDSAFVLPHFQVYKYLIATKLVDRGLVEKSLAYLEN
IASVIVANPSLVEISFVDNVYNLADRLKYYDLVGEVEDESQFGGMLETNRPDNSWLKDLK
NVQNDFHAGVISHQSMQNLQPYTTTSYEADINQQQQNYENSMPELQQYEYQSNSAPQQSW
QQEQHQQVPEYQDNQLQQQTQQADFSQNQYQDQQNYWSNQQQWNNQPNQYIQEPVDQQNM
YGLNNQINEQKEVEKDIPEEPLQPQISLPNQLNAYEDEKPEKQEERKPVAKPKPAPAEPE
KTQSTGWFGGIFSKLALKPKNQMKLPDDKNPKIVWDQDKKRWINVDEDPNDPANEFKPPP
KLSELMPKLPPAQQAHSTPTSANTSLPSFDPNRTLVEQNGGVPNTNSGIEDAGPQRPSQQ
GNMFKLQKGRNLKNSYIDVFNQGNKQQANSGPASLPAPNQLPSAAPQMNFFVPQPIADPN
APIDFLTPGGVPHIGDPQMSRWSSSSSLSKEVQFYMQQKPRPR
NT seq
5532 nt
NT seq
+upstream
nt +downstream
nt
atgtcttggatgaagagaagaggtccaagtacacctagccctgctccagcgcctgcagta
cctatgtacaaccccaatcaacattccgcaacacaagagacacaatggcaaaaccaacca
gtccaaaacaattggtatcaaggacaacaacatgcacagtatcaaccagtgccgaaacaa
gaaaataccaatccaccccagcagaattactggcaacaacaacaacacaatcctctctca
tacaatcaaaacagtcagtataatcaacatcagtatcaaaatcagcaacacacgggatat
gtccaaaataactctggatatgaacaacaacattatagtaatgtgcaatatagtcaattg
aacaaccaaaataatgtttatggaactggaactcagagtggacagcaacagactggagaa
gacccttggaattggtcatggggggatgaagacaattcaaatgtgcagccaactccccaa
gcgaccatcactcctaaccaaacaggaggacaaaccgatggttcgtttggaaatctggat
acatggaactggcctgctcaggaggcgaaaaatcctgtcaagaatgaagaacccacagat
acgcatgagttatttccaaaaattggtttagtggctaaaatctctccaaaatctgacacg
gatacggatatatcaaaattacatcctcttcaagaccatctgactgtaacaggaaaaaga
agcaaactagaaacaccccagtggtctacagagtcccaaatgtcgcaagaatcttcagat
gatattctacatacatccgaaagtgataaaagccatatgatgagtcggagctcaacaatt
agtcattctcctatatcaggacacgatctaatagcacaaaatttagatgaaccacctgtt
aaaaacgacgtctatgaaactaaagaaatgatgtcgaacgttagattgaatcctacacct
ccatcaccgaaaactcttcaaggacctcctccattaccaacatccagtatagcagacgat
ccgaggaatccgtataagaggacaacaaccttgtcgcatacttccgcaagtagatttaga
gcttcaaatattacaccgcccgatacccgacaaaatgtttaccaacccacatttcacaat
caacagatcaatcttgaaaatgccgatagttctgagccgatagcaatgtcggatcctgat
cattcccaatctgtacaaaagataaaacttggtcataaattagataataatgaagcacct
atgaatgatagaaatcaatatctagaaactggtcaactatcagaagtaaattacaacgat
cgaatgaatgaacaaacatcggagcgagaagatcagcaaatttacgatcaagaggggctt
gaaaatatcacggatgcttatccgcctccaggtcttagacggatggtacccggacagctg
gagcaagctgaacctactagtaatgttcctaattttactgatgaaccaccaccaggcctt
agcagaatggtattaggtcaaacggaatctgcagctcctactactttgggaacggttgcc
caaaatgttgatttactctctcaattcgatacctctggtcctcccgaaggtttgcgcaga
atgattccaggtgaatctagttctccagagtcgtcgttacgaattcaacagcaaaatagg
gaggataatgaatccgaaccagaattcagtcaactaactcagcatacttctcaacctaga
tcggcaactatcggggcagacactccccctgctgtaaataatcccatcgctagtcaacca
tctgccaataatattagtcgcgcccgtcttgaaaatggaaccaacgtaccgacccgaagt
tccagcgtggaacccgataacaagagacgcgattctatcgaaggggaaccccaggagcaa
gaaatatcgaatattactaattccgtaagaaatatgacggtcggagaaaatttgaccgac
ggtcacgtttctaataatagtttacctgatcctgttccgaggagacaaagtaggcaagaa
agtagtgatagtgatagagaatcgaggaaaccaccaagaggtccttctagagataaaaaa
tctgctgaacgaactactaaacgggatcgagatagagaaagggatcgggaccgagagaag
gatagagataagagtagaagagatcgggagaggtacagtcctgataactacagagataaa
aagtatgagaggcgaagatacagagatcgacgatatgaagacgataccgattattacagt
gataaggaaaaggagaaaggttttgatgaatgggatagggactatgataggaaatataac
agtttgcgcaaggacaaggaaaaagaaaggcgtcgaatggagagagatccacgagattat
aatagaagagattactactatggaagcaggtacggcgacgattatgaaaatgaacaaaga
tctaggccatccagcagatcagactccctacatgaatcctacagggccagagacaaagat
caggatcgtgatagaagaaatagagatagagaaagagaaaaatatcgatcgagaagagat
cctagggatgcatataattatcaaggttattcttatgatccgtttaatccgtactaccaa
caatatcagtactatgaaaatctaagacgtaccaatcctcaagcgtacgcggaatggtat
agaaagtactaccaacaagctactagccattctgcgtcatatgggggagaggatcgagct
tcggtacattctggaagaagttccgcaaatgaggaactagcgaaggataggtatacgagg
cagagcttttacagtcaaatgagctcaacgcaaataggaggatactacagggatacacat
agtcatacacatagtcaatacggtcatgatgcttctagctactctcgacccttcgatcaa
actgattcgctattggccctcgacgatacaacagcagcttctcaacggctaacccctgct
aaattcacgatggctcacatcaaagcttcgatagcttcaggaaaactgctccgtatcctt
ccccactatcccatcgacggtcagccggcagtagttgaaatctgtagcacttcatccttc
ttggctaatgatgaggagttccaagagctaagccagtttccagggccgttagttaaagga
gtaactcacaaaaaaacaataattgaatactgcgagaataaaattagaaatgctattgct
ggtcaaaaaatagatgatgtcgaaagttatattttaatgtgggagttgctaatattgttg
attagacagaatgggatggtggtaggagctgatatagctgagcttttactccaaaataga
agggaaataccccctcctcgggctgcttctgtcatttccagtttaagtagtaacaatgga
gatatcaatcattcttctgaagcgagtaatcatatcgtttctgaaaatactggtagttta
ttgtccgtactaaaggaggaggagataactaataaatttagggaatttttgctttatgga
tctgggaaagaagcccttgaatgggcaatgaaacatagtctatggggtcatgcgcttttc
ttagctagtaaattagataaaaggacttacgccaatgtgatgatgagattcgcaaacggt
ttaactatgaatgatccgctgcaaacgttgtatcaattgctttctggaaaaatgcctgct
gctgtaacgtgtgtttccgacgataaatggggtgattggcgtccgcatttagcaatgatt
ctatccaattcatctcagcgaccggagttaaactgtaaagccattacaactttgggagat
actttaagaaatagaggaagtttgtatgctgcccagttttgttatttaatggcagaggtt
ggttttggcaagtacgacaaccctgatacacgactggtgctcttaggtgcagatcactcg
aaaccttatcccacttttgctacgaacgaagctatacatatgacggaaatctatgagtat
gcttgtggactgaatgattccgctttcgttcttcctcatttccaggtgtataaatatctc
atagcgactaagctggttgatcgaggacttgtggaaaaatctttagcgtatttggaaaac
atcgcttctgtcatcgttgcgaatccttccctggttgaaatatcattcgtggataatgta
tataacctagccgatcgactgaaatactacgatcttgtcggcgaagttgaagatgagtcc
caatttggtggaatgttggaaacgaacaggccagacaattcttggttaaaagatctcaaa
aatgtgcaaaatgatttccatgccggtgtaatttcacatcaaagcatgcaaaatttacaa
ccttacacaacaacgtcttacgaagcagatataaatcaacaacaacaaaattatgaaaat
agtatgccggaacttcaacaatacgagtatcaatcaaattctgctccgcagcaatcctgg
caacaagaacaacatcaacaagtcccggaatatcaggataatcagcttcagcaacagacc
caacaagcagatttctctcaaaaccaataccaagatcaacaaaactattggtcaaatcaa
cagcaatggaataatcaaccaaatcagtatatccaggaacctgttgatcaacaaaatatg
tacggattaaataatcaaattaatgagcagaaagaggtagagaaagacatacccgaagaa
ccgctacaacctcagatatcgttgccgaaccaactgaatgcgtacgaagatgaaaaaccc
gaaaaacaagaagaaaggaaaccagtagctaaacccaaaccagcacctgcggaaccagaa
aaaacgcaaagtactggatggttcggaggtatatttagtaaattggcgttgaagcctaaa
aatcagatgaagttgccggatgataagaatccaaagatcgtttgggatcaagacaaaaaa
cgttggattaacgtagatgaagatccaaatgatccggcgaatgaatttaaacctccgccg
aagttatcagaattgatgcctaaattacctccagctcaacaagctcattctactcccacg
tctgccaatacctcgctgcctagttttgatcccaatagaacgcttgttgaacaaaatgga
ggagtacctaatacgaattctggaatagaagatgctggcccacaaagaccatcacagcag
gggaatatgtttaaactgcagaagggtagaaacctgaaaaattcctacatagacgttttc
aaccaaggtaataaacaacaagctaattcagggcctgcttctcttcccgcacccaatcaa
ttgccttcagctgctccacagatgaacttcttcgttcctcagcctattgcagatcctaac
gcgcctatagattttcttacaccgggtggtgtgcctcatataggagatcctcagatgtct
aggtggagttcttctagttctttatcgaaggaagtacaattctatatgcaacaaaaacct
cgcccacgataa
DBGET
integrated database retrieval system
