Desulfosarcina widdelii: DSCW_50330
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Entry
DSCW_50330 CDS
T06303
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
dwd
Desulfosarcina widdelii
Pathway
dwd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dwd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DSCW_50330
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dwd02000
]
DSCW_50330
Transporters [BR:
dwd02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
DSCW_50330
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
BBO77616
UniProt:
A0A5K7Z727
LinkDB
All DBs
Position
complement(5411306..5412529)
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AA seq
407 aa
AA seq
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MIRKLVLLAALGAILTLPSKGLAQPADAALLDMPFDQIEEQARGSQVRWYMFGGWAHVND
WVDSYVAGEMKKRWGIDLVRVPMDAGVFVNKLLNEKAAGKRTGTIDLLWINGENFKNAKE
AGLLFGPFAANLPNVQRYVDPKSVAYDFGYPVDGYEAPYGRAQFVFETDTARIDTPPQTM
AALKAWVKANPGRFTYPQPPDFTGSAFIRQVFCAVTGGHEQYLAGWNPDLFARKAPLLWN
WLNDIEPFLWQKGRTYPKDSAVLDTLFSRGEVAFGMSYHPPHAQNKILEGSYPETVRTFV
LKDGSIYNTHFTAIPFNSPNKAGAMVLANFLISVDAQLSKYDPENWGDFPALDPDRLTPA
QRNQFQSVDLGPATLGSDQLDPVAVPEIPSAYLEALEQGWKTHVLDN
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgatccgaaaactcgttcttctcgcagccctgggggccatattgaccctgccttcaaag
ggactggcgcaaccggcagacgccgccctgctggatatgccctttgaccaaattgaggag
caggcccgcggcagccaggtacgctggtacatgttcggcggctgggcccatgtcaatgac
tgggtggacagctatgtggccggcgagatgaaaaaacgctggggcatcgatctcgtgcgg
gttcccatggacgccggggtcttcgtgaacaaattgctcaacgagaaagccgccggcaaa
cgcaccggcaccatcgacctgctctggatcaacggagagaacttcaaaaatgccaaagaa
gccggtcttctcttcggcccctttgccgcgaacctgcccaacgtgcagcgttatgtggac
ccgaaaagcgtggcttatgatttcggctatccggtggacggttacgaggcaccgtatggc
cgggcgcagttcgttttcgaaaccgacacggcccgcatcgacaccccgccgcagaccatg
gccgccttgaaggcctgggtcaaggccaaccccggccggttcacctacccccaaccgccg
gatttcaccggctccgcttttatccgccaggtgttctgcgccgtcaccggcggtcatgaa
cagtatctggccggatggaacccggatctttttgcccgcaaggccccgcttctctggaac
tggctcaacgatatcgaaccgtttttgtggcagaaaggacgcacctatcccaaggacagc
gccgtgctggacacgctcttttccaggggagaagtggccttcggcatgtcctaccacccg
ccccacgcccagaacaaaattctcgaaggcagctacccggagacggtgcgaaccttcgtt
ttaaaggacggttccatctacaacacccactttacggccattcccttcaacagccccaac
aaggccggggccatggtgctggccaattttctcatttccgtggatgcccagttatccaaa
tacgacccggaaaactggggagactttcccgcccttgatccggaccggctgacaccggcg
cagcgcaaccagtttcaatccgtggacctggggccggccaccctgggatcggaccaactg
gacccggtggcggttcccgagattccatcggcgtacctggaggcgctggagcagggctgg
aagacccatgtcctggacaactaa
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