Drosophila yakuba: Dyak_GE16147
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Entry
Dyak_GE16147 CDS
T01068
Name
(GenBank) uncharacterized protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
dya
Drosophila yakuba
Pathway
dya03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
dya00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Dyak_GE16147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dya03400
]
Dyak_GE16147
Enzymes [BR:
dya01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
Dyak_GE16147
DNA repair and recombination proteins [BR:
dya03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
Dyak_GE16147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
RNA_ligase
DNA_ligase_A_C
BRCT
DNA_ligase_IV
mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID:
EDX01603
FlyBase:
FBgn0233691
UniProt:
B4Q2E2
LinkDB
All DBs
Position
X
Genome browser
AA seq
918 aa
AA seq
DB search
MSVDIASTIKFRDICGLFEKLKASKKVANKEELLKSYYESFCRHRESFRRQTGLNDDQPE
NGVSSFYSVLRLLLPGADTGRDTYGLQITALGRLYIRVLQLPTDSSDAIRLQHRTGNMYR
DYGDVVYSVLKPRCFNPPSDLRLNHIHEMLDTIANEDTEVKQQQLIRFTEQASPEEQKWL
IRLLLKSLGLGIGEQKIFGVLHPKAQDIYQRCSDLGHVCNLLADRTTDLDASTSKDSKAA
VKFVNLNSVIRPFHQIRPMLCERFPGDIQELMQSDVLYLETKMDGERFQLHIDRGRFMYI
SRNGVDYTKNFGHSYDHGTLTPKLRGLLPLGLESIILDGEMMVWDTNQLRFREKGENTDV
KSLKPEGSWQPCFVVYDLLYFNGQSLLDHTYIQRAYKLQKLIVEQSGVLQLMRARKIGSV
KEFNELFQQALDSHAEGIVLKKQASRYQPGVRLGGGWYKDKADYIKGLITEFDVLIIGAF
YNRKRTFVDSFLLGVLQPAPPGSSNRPEVFSIGVVANNTKQRAVLNHTLKPHWHDVVNEP
PPLWYHYKPKDRSGCPDLWIEPHNSVILQVKAADLAPNGAFFTRKSLHFPRTEMKRDDKP
WNECMTLKEFNNLCDGSLAIKKLNKRQLRLEDVTTKRKQMRMTPSERSRLALAVYEKRYV
ANPSTSSSKLFDGLSFCILSGSAGRHSKHQLQELAVKNGGCIVENPLPNDPKCFCIAGDE
TFLVRRLILQKPRTCDIVRMEWLLRVCQKQELELRPRDIIAATEPLQQDLAECFDRHGDS
YSKDIANVQELQDLLQDIHLTAENVVGISASKVNALEDRLLDGKKNLNMFRHLNAYFYSP
QGDELARLLFMQNGGRIVDDSDPQLNLGFICMSSDIDNDHFEHWLRNHSKLSADKVVNSA
WIHQSHREGLLLPMQCFV
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtagatatagccagcacgattaaattccgggatatttgtggcctattcgagaag
ctaaaggcctccaaaaaggtggccaacaaggaggagctcctcaagagctactacgagtcc
ttctgccggcaccgcgaatcctttcgccggcaaaccggattaaacgacgaccagccggag
aacggtgtcagtagcttctattccgtgctgcgactgctgctgccgggtgcagacacgggt
cgggatacctatggattgcagatcaccgcgctgggcaggctctacatcagggtgctccag
ctaccaacggactccagcgatgccatcagactgcagcaccgcaccggaaacatgtaccgg
gactacggtgatgtcgtttattccgtgctcaagcccaggtgctttaatccgcccagcgat
ttgagactgaatcacatccatgagatgctggacaccattgccaatgaggacacagaagtt
aagcagcagcagctcatccggtttacggagcaagcctcgcccgaggagcaaaagtggcta
atccggttgctgctaaagagcctcggtctgggaatcggggagcagaagatctttggtgtg
ttgcatcccaaggcgcaggacatctaccagcgctgctccgatctgggacatgtgtgcaat
ctgctggcagaccggaccaccgacctagacgccagcaccagcaaggatagcaaagcggcg
gtcaagtttgtaaacctgaattccgtcatccggccattccaccagatacgacccatgctg
tgcgaacgcttcccgggggacatccaggagctaatgcagtcggatgtgctctatctggag
accaaaatggatggcgaacgctttcagctgcacatcgatcgaggtcgtttcatgtacatt
tcccgcaatggagtggattacaccaagaactttggtcacagctacgatcacggcaccttg
acgccaaaactgaggggtcttttgcctctcggcctagagtccatcatcctcgacggcgag
atgatggtgtgggacaccaatcagctgcgttttcgggaaaagggcgagaacacggacgtg
aagagcctgaagccggagggcagctggcagccctgtttcgtggtctacgatctgctgtat
ttcaatggccagagtctgctggaccatacctacattcagcgggcgtacaagttgcagaaa
ctcattgttgaacagtcaggtgtgctgcagttaatgcgtgcccgcaaaatcggttccgtc
aaagagttcaatgagctgtttcagcaggcactcgactctcacgccgagggcattgtgctg
aagaagcaggcatccagatatcagcctggcgtaagactgggcggcggctggtacaaggac
aaggctgattacatcaagggtctgatcaccgagttcgatgtgctgatcatcggcgcattc
tacaaccgcaagcgcacttttgtggactcatttttgcttggagttcttcagccagcgccg
cctggcagctccaatcgtcccgaagtcttcagtattggtgtggttgccaacaatacgaaa
cagcgcgcagtgctaaatcacactctgaaaccgcattggcatgatgtagtcaatgagcca
ccgccactgtggtatcactacaagcccaaagatcggtccggatgccccgatctgtggatc
gaaccgcacaactcggtcattctgcaggttaaggctgccgacctggcgccaaatggagct
tttttcacccgaaaatcgttgcactttccgcgcactgagatgaaacgagatgataagccc
tggaacgagtgtatgacacttaaagagtttaacaatctatgcgacggttccttggccatc
aagaagttaaacaagcggcagctgcgactggaggatgtgacgaccaagcggaagcagatg
cggatgacgccctccgaacgaagccgactggcattggccgtctatgagaagcgctatgtc
gcgaacccctccactagcagttccaaactcttcgacggtctgagcttttgcattctgagc
ggatctgccggacgacacagcaagcatcagctgcaggagctggccgtcaaaaacggtggc
tgcatcgtggagaatcccctgcccaatgatccgaagtgcttttgcatcgcaggcgatgag
acgtttttagttaggcggctcatccttcaaaagccacgcacctgtgacattgtgcgcatg
gagtggctactgagggtctgccagaagcaggagcttgagctgcggcctagggatattata
gcggccactgagccactgcagcaggatctggctgagtgttttgaccggcacggtgatagc
tacagtaaagacatcgccaacgtgcaggagctgcaggacctgctgcaagacattcatttg
acagctgagaacgtggttggcataagcgcatctaaagtaaatgcacttgaggatcggctt
ctggatggaaaaaagaacctcaacatgttccggcatcttaatgcgtatttctacagtcca
caaggcgatgaattagccaggcttttgtttatgcaaaacggcggccgaatagtcgacgat
tccgatccgcaactaaatcttggtttcatctgtatgtcttccgacatagataacgaccac
tttgagcactggcttcgcaatcattcaaagttgagcgctgacaaagtcgtaaactcggca
tggatccatcagtcgcatcgtgaaggcctcctacttcccatgcagtgtttcgtctaa
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