Drosophila yakuba: Dyak_GE21462
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Entry
Dyak_GE21462 CDS
T01068
Symbol
Dyak_Rpd3
Name
(GenBank) Rpd3
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
dya
Drosophila yakuba
Pathway
dya03082
ATP-dependent chromatin remodeling
dya03083
Polycomb repressive complex
dya04213
Longevity regulating pathway - multiple species
dya04330
Notch signaling pathway
dya04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
dya00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
Dyak_GE21462 (Dyak_Rpd3)
03083 Polycomb repressive complex
Dyak_GE21462 (Dyak_Rpd3)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
Dyak_GE21462 (Dyak_Rpd3)
04350 TGF-beta signaling pathway
Dyak_GE21462 (Dyak_Rpd3)
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
Dyak_GE21462 (Dyak_Rpd3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dya03036
]
Dyak_GE21462 (Dyak_Rpd3)
Enzymes [BR:
dya01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
Dyak_GE21462 (Dyak_Rpd3)
Chromosome and associated proteins [BR:
dya03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
Dyak_GE21462 (Dyak_Rpd3)
HDAC complexes
Sin3A-HDAC complex
Dyak_GE21462 (Dyak_Rpd3)
BRAF-HDAC complex
Dyak_GE21462 (Dyak_Rpd3)
REST complex
Dyak_GE21462 (Dyak_Rpd3)
SHIP complex
Dyak_GE21462 (Dyak_Rpd3)
MiDAC complex
Dyak_GE21462 (Dyak_Rpd3)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
Dyak_GE21462 (Dyak_Rpd3)
Heterochromatin formation proteins
Other heterochromatin formation proteins
Dyak_GE21462 (Dyak_Rpd3)
Chromatin remodeling factors
NuRD complex
Dyak_GE21462 (Dyak_Rpd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-ProteinID:
EDW93443
FlyBase:
FBgn0238719
UniProt:
B4PIA1
LinkDB
All DBs
Position
3L
Genome browser
AA seq
521 aa
AA seq
DB search
MQSHSKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAD
EMTKFHSDEYVRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAV
KLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDG
VEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFV
PIISKVMETFQPAAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKKYNLPFLMVGGGG
YTIRNVSRCWTYETSVALAVDIANELPYNDYFEYFGPDFKLHISPSNMTNQNTSEYLEKI
KNRLFENLRMLPHAPGVQIQAIPEDAINDESDDEDKVDKDDRLPQSDKDKRIVPENEYSD
SEDEGEGGRRDNRTYKGQRKRPRLDKDTNSNKASSETSSEIKDEKEKGDGADGEESTASN
TNSNNNSNNKSDNDAGATANAGSGSGSGSGAGAKGAKENNI
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgcagtctcacagcaaaaagcgcgtttgttactactacgacagtgacattggcaactac
tactatggccagggtcatcccatgaagccgcaccgcatacgcatgacccacaacctgctg
ctcaactatgggctgtatcgtaaaatggaaatataccgtccccataaagccactgccgat
gagatgaccaagttccactcggacgagtacgtccggttcctgcgttccattcggccggac
aacatgtccgagtacaacaagcagatgcagcgtttcaatgtgggcgaggattgtcccgtc
tttgatggactctacgagttttgccaactctccgccggcggatccgtagccgcggccgta
aaactgaataagcaagcctcggagatctgcatcaattggggcggtggactgcatcatgcc
aagaaatcggaggcatccggcttctgctacgtcaacgatattgtgctgggtattttggag
ctgctgaaataccaccagcgtgttctgtacatagatatagacgttcatcacggcgatggt
gtggaggaggcgttctataccaccgatcgtgtgatgacggtgagcttccacaagtacgga
gagtatttcccgggcaccggcgatctgcgagacattggcgccggcaagggcaagtactat
gcggtgaatatacccctgcgtgatggcatggacgatgatgcgtacgagagcatctttgtg
cccattatcagcaaggtgatggagacattccagccggcagccgtggtgctgcagtgtggc
gccgactcgctgactggcgatcggttaggttgcttcaatctcaccgtcaagggacacggc
aagtgcgtggagtttgtgaagaagtataacctgcccttcctgatggtcggcggtggtggt
tataccattcgtaacgtatcccgttgctggacctatgagacctccgtggccctggccgtg
gatatagccaacgaactgccctacaacgattacttcgagtactttggtcccgatttcaag
ctgcacattagccccagcaacatgacgaatcagaatacctcggagtacctggagaagatc
aagaatcgtctgttcgagaacctgcgcatgctgccacacgctccgggcgttcaaatccag
gcgatacccgaggacgccatcaatgatgagtccgacgacgaggacaaggtcgacaaggac
gatcgcctgccgcagagcgacaaggacaagcgcattgtgcccgagaatgagtactccgat
tcggaggatgagggcgagggcggtcgcagggataaccgcacgtacaagggtcagcggaag
cgaccgcgtctggacaaggacaccaacagcaacaaggcatcctcagagacgtccagcgag
atcaaggacgaaaaggaaaagggcgatggcgctgatggcgaggagtcgacggcgtccaat
acgaatagcaacaacaacagtaacaacaagagcgataacgacgccggagcgacagctaat
gccggatccggatcgggttcaggttccggtgccggggccaagggcgccaaggagaacaac
atttga
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integrated database retrieval system