Dyadobacter chenhuakuii: NFI80_25280
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Entry
NFI80_25280 CDS
T08460
Symbol
ligD
Name
(GenBank) DNA ligase D
Organism
dyc
Dyadobacter chenhuakuii
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_M
DNA_ligase_A_C
DNA_primase_S
DNA_ligase_OB_2
Motif
Other DBs
NCBI-ProteinID:
UTM21789
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Position
unnamed:22864..25557
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AA seq
897 aa
AA seq
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MSLTKYNEKRSSSKTPEPFGGKPDKKVLRFVVQKHAASHLHYDFRLEMDGVLKSWAVPKG
PSLDPDVKRLAMMVEDHPYDYRTFEGIIPKGEYGGGTVMVWDQGTFEPWEDPAKDKKDNE
KKLLHQLYSGKIKFVLNGQKLNGSFALVKAHGRGENAWLLMKLEDEYASKDDVALQDKSV
VSGLDLQQIAASSDNVYGSDKKRGKKTASKKAVKETLEKQVDPDDTQVPQPATDVAAILT
KAPKGKFDNTIKPMLATLVDAPFDDEGWQYEVKWDGYRALAFMNGAEAELKSRNNKSFDD
KFYPVLAAVKRWGVNAVVDGEIVVVNENGISNFNNLQNWRSEADGQLLFYVFDVLWLDGK
NLMGLTQQERSAVLLSLIPEDDIIRTGFSVQATGTDFFNVAKDMGLEGIIAKRSDSTYVP
GDRSKNWLKIKVQKRQEVIIAGYTKNDGSPKSFSALLLGAYRHGRLEYVGKVGTGFNDKQ
QREMIAQFKPLIIEDAPFDAMPDYNKPSRFRRNPPHASATWLKPELVCEINFTEITEDGV
FRHPSFLALREDKNAREVVIETASDTEEVIEKTPGPTIKDVIKPPQRSAVKTLLNPKEKT
QCKKLNGQELKFTNLDKIYWPDEKITKRQMLNYYYQVAPYILPYLKDRPESLNRHPGGIK
GPSFYQKDVTGKVPSWMTTYLYHSNDEPEDKNYLIANDEATLLYMANLGAIEINPWSSTT
DNPDNPTWCVIDLDPADKTTFDQVVQAAQVTKSVLDELGVPSYPKTSGSTGIHIYIPFEG
QYTYEQSKEFARVVVTLVHRQIPEFTSLERAVKARNGKMYLDFLQNRPGATLAAPYSVRP
KPGATVSMPLHWDEVKPGLKMSDFTIFNAMERLQGQGDLFSPVLGKGIDLRKIVGED
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgagccttaccaaatacaatgaaaagcggtcttcaagtaaaacgcccgagccatttggc
ggaaaacctgataaaaaggttcttcggttcgttgtacaaaaacatgctgcatcacatcta
cactacgattttcgtctggaaatggacggggtgcttaaaagctgggcggttcccaaaggg
ccctcactggatccggatgtaaagcggcttgcaatgatggttgaagatcacccttatgat
taccgcacttttgaagggattatccccaaaggggagtatggtggggggacggtgatggtc
tgggaccagggcaccttcgagccttgggaagatccagcaaaagacaaaaaggacaacgaa
aagaaactgcttcaccagctgtactcgggcaagattaaatttgtgcttaatggacagaaa
ctcaatggcagctttgctttggtcaaagcgcatggtaggggagagaatgcatggctgcta
atgaaactggaagacgagtatgcctcaaaggacgacgtagcactgcaagataaatctgtc
gtttctggtctggacttacagcagatcgcagcaagtagcgataacgtctatggcagcgat
aaaaaaagaggcaaaaagacggcctcaaaaaaggcagttaaagaaacacttgaaaagcaa
gttgatcccgatgatacgcaggtgccgcagccggccacggacgtcgcagcgattttgaca
aaagccccgaaaggtaaatttgataataccatcaaacctatgctggctacgctcgtggac
gcccctttcgacgatgaaggatggcaatatgaagttaaatgggatggctaccgcgcgctg
gccttcatgaatggggcagaagcagagctgaaatcccggaataacaaatcctttgatgat
aaattttatccggtgcttgccgctgtcaagagatggggagtgaatgcggtcgtcgacggt
gagatcgtcgtagtcaatgagaatggcataagcaatttcaataatcttcaaaactggcga
agcgaagcggacgggcagctccttttctacgtttttgacgtgctttggctggacggcaaa
aacttgatgggattgacccagcaggagcgaagtgccgtgcttctttcgctaataccagaa
gatgacattatccgcaccggtttcagtgtccaggccacagggacagattttttcaatgtt
gccaaagacatgggactggaagggatcattgccaaaaggtcggatagtacttatgtgcct
ggtgaccgctcaaaaaactggcttaaaattaaagtccagaaaaggcaggaggtcatcatc
gcgggctacacaaagaatgatggttcacccaaatcatttagtgcgttgctgctgggcgct
taccgccatggccgcctggaatatgtaggcaaggttgggaccggcttcaatgataaacag
caaagggagatgattgcgcaatttaagcctctcattattgaagacgcgccatttgacgcc
atgcccgattataataaaccatcccggtttcgccgtaacccgccacatgcaagcgcaaca
tggcttaaaccggaactcgtatgtgagattaattttacggaaatcacggaagatggcgtg
tttcgccacccatcgttcctagcacttagggaagacaagaatgccagggaagttgtcatt
gagaccgcatcagatactgaggaagtaatcgagaaaactcctggcccgacgatcaaagac
gtaataaagcccccacaacgcagcgcggttaaaacgcttttgaaccccaaagagaagaca
caatgcaaaaaactcaatgggcaggagcttaaatttacaaaccttgacaaaatctactgg
ccggatgaaaagataaccaagcgccagatgctcaattactattatcaggttgcgccctac
atcttgccttacctgaaagacaggccagaatcacttaaccggcatccgggtggtattaaa
ggtcccagcttttaccaaaaggatgtcactggcaaggtgcccagttggatgaccacctat
ctttatcatagcaatgatgagcccgaagacaagaactacctgattgcaaacgatgaagca
acgcttctatacatggcaaatctgggtgcgattgaaatcaatccgtggagctcaacgacc
gataaccctgataaccctacatggtgcgtgattgatttagatcccgccgacaaaacgacg
tttgaccaggtggtccaggctgcgcaggtcacaaaaagcgtattggacgagctgggcgtg
ccatcgtatcctaaaacaagtgggtcaaccggcatccatatttatattccttttgaaggc
cagtatacctatgagcaatccaaggaatttgcaagggttgttgtaacgctcgtacaccgt
caaataccagaattcacgagtctggaaagggcagttaaagccaggaatggaaaaatgtac
ctggacttcctgcaaaaccgtcctggcgcaacgctggccgcaccatactccgtacgtccc
aaacccggtgcaaccgtgtcgatgccgctgcactgggacgaagtaaaaccagggcttaaa
atgtctgatttcacgatttttaacgcaatggagcggctgcaaggccagggcgaccttttc
agtcccgtgctgggaaaaggaattgatttgcgcaagatcgttggggaagactga
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