KEGG   PATHWAY: dzc00230
Entry
dzc00230                    Pathway                                
Name
Purine metabolism - Dickeya zeae
Class
Metabolism; Nucleotide metabolism
Pathway map
dzc00230  Purine metabolism
dzc00230

Module
dzc_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:dzc00230]
dzc_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:dzc00230]
dzc_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:dzc00230]
dzc_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:dzc00230]
dzc_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:dzc00230]
Other DBs
GO: 0006163 0042278
Organism
Dickeya zeae [GN:dzc]
Gene
W909_01685  nudF; ADP-ribose pyrophosphatase [KO:K01515] [EC:3.6.1.13 3.6.1.-]
W909_18525  ADP-ribose diphosphatase [KO:K08312] [EC:3.6.1.-]
W909_03170  phosphopentomutase [KO:K01839] [EC:5.4.2.7]
W909_05920  phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
W909_09975  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
W909_13510  amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
W909_01220  phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
W909_05580  purN; phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
W909_09180  phosphoribosylglycinamide formyltransferase [KO:K08289] [EC:6.3.1.21]
W909_14910  phosphoribosylformylglycinamidine synthase [KO:K01952] [EC:6.3.5.3]
W909_05585  phosphoribosylaminoimidazole synthetase [KO:K01933] [EC:6.3.3.1]
W909_14250  phosphoribosylaminoimidazole carboxylase [KO:K01589] [EC:6.3.4.18]
W909_14245  purE; N5-carboxyaminoimidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
W909_05640  phosphoribosylaminoimidazole-succinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
W909_18910  adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
W909_10385  adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
W909_01225  purH; purine biosynthesis protein purH [KO:K00602] [EC:2.1.2.3 3.5.4.10]
W909_05345  adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
W909_05385  ushA; 5'-nucleotidase [KO:K11751] [EC:3.1.3.5 3.6.1.45]
W909_18535  nucleotidase [KO:K20881] [EC:3.1.3.-]
W909_03175  deoD; purine nucleoside phosphorylase [KO:K03784] [EC:2.4.2.1]
W909_15355  hypothetical protein [KO:K09913] [EC:2.4.2.1 2.4.2.2]
W909_04955  membrane protein [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
W909_05060  hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
W909_14680  inosine 5'-monophosphate dehydrogenase [KO:K00088] [EC:1.1.1.205]
W909_14745  nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
W909_17375  yjjX; inosine/xanthosine triphosphatase [KO:K01529] [EC:3.6.1.73]
W909_16315  nucleoside-triphosphate diphosphatase [KO:K01519] [EC:3.6.1.66]
W909_15530  xanthine phosphoribosyltransferase [KO:K00769] [EC:2.4.2.22]
W909_14675  guaA; GMP synthase [KO:K01951] [EC:6.3.5.2]
W909_13250  glutamine amidotransferase [KO:K01951] [EC:6.3.5.2]
W909_16875  guanosine 5'-monophosphate oxidoreductase [KO:K00364] [EC:1.7.1.7]
W909_11185  guanine deaminase [KO:K01487] [EC:3.5.4.3]
W909_19945  gmk; guanylate kinase [KO:K00942] [EC:2.7.4.8]
W909_05435  ribonucleotide-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
W909_05430  ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
W909_01875  ribonucleoside triphosphate reductase [KO:K21636] [EC:1.1.98.6]
W909_15160  dgt; deoxyguanosinetriphosphate triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
W909_13425  5'-nucleotidase [KO:K08722] [EC:3.1.3.89]
W909_19955  bifunctional (p)ppGpp synthetase II/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase [KO:K01139] [EC:2.7.6.5 3.1.7.2]
W909_19020  guanosine pentaphosphate phosphohydrolase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
W909_14295  exopolyphosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
W909_15980  relA; GTP pyrophosphokinase [KO:K00951] [EC:2.7.6.5]
W909_18860  cyaA; adenylate cyclase [KO:K05851] [EC:4.6.1.1]
W909_17525  adenylosuccinate synthetase [KO:K01939] [EC:6.3.4.4]
W909_09660  adenosine deaminase [KO:K01488] [EC:3.5.4.4]
W909_06450  AMP nucleosidase [KO:K01241] [EC:3.2.2.4]
W909_04860  LOG family protein ygdH [KO:K06966] [EC:3.2.2.10 3.2.2.-]
W909_16165  cpdB; 3'-nucleotidase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
W909_05370  adk; adenylate kinase [KO:K00939] [EC:2.7.4.3]
W909_15975  mazG; nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
W909_01695  3',5'-cyclic-nucleotide phosphodiesterase [KO:K03651] [EC:3.1.4.53]
W909_03560  3',5'-cyclic-nucleotide phosphodiesterase [KO:K03651] [EC:3.1.4.53]
W909_17165  apaH; diadenosine tetraphosphatase [KO:K01525] [EC:3.6.1.41]
W909_15890  adenylylsulfate kinase [KO:K00860] [EC:2.7.1.25]
W909_15895  cysN; sulfate adenylyltransferase subunit 1 [KO:K00956] [EC:2.7.7.4]
W909_15900  sulfate adenylyltransferase subunit 2 [KO:K00957] [EC:2.7.7.4]
W909_02660  OHCU decarboxylase [KO:K16840] [EC:4.1.1.97]
W909_15665  Asp/Glu racemase [KO:K16841] [EC:5.1.99.3]
W909_15660  allantoinase [KO:K16842] [EC:3.5.2.5]
W909_15605  allantoate amidohydrolase [KO:K02083] [EC:3.5.3.9]
W909_15610  aminotransferase V [KO:K00839] [EC:2.6.1.112]
W909_15650  amidase [KO:K22601] [EC:2.1.3.5]
W909_15640  Ggt [KO:K22602] [EC:3.5.1.126]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
dzc00030  Pentose phosphate pathway
dzc00220  Arginine biosynthesis
dzc00250  Alanine, aspartate and glutamate metabolism
dzc00260  Glycine, serine and threonine metabolism
dzc00340  Histidine metabolism
dzc00630  Glyoxylate and dicarboxylate metabolism
dzc00730  Thiamine metabolism
dzc00740  Riboflavin metabolism
dzc00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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