Dickeya chrysanthemi: Dd1591_2535
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Entry
Dd1591_2535 CDS
T00930
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
dze
Dickeya chrysanthemi
Pathway
dze03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Dd1591_2535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dze03400
]
Dd1591_2535
DNA repair and recombination proteins [BR:
dze03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Dd1591_2535
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Dd1591_2535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
SBDS_domain_II
AAA_30
UB2H
DUF87
DUF4686
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ACT07375
UniProt:
C6CLY6
LinkDB
All DBs
Position
complement(2889497..2891509)
Genome browser
AA seq
670 aa
AA seq
DB search
MSKEFKLHSAFKPAGDQPEAIRRLKEGLEDGLAHQTLLGVTGSGKTFTIANVIADLNRPT
MVLAPNKTLAAQLYGEMKAFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTQGMLIDQRAILRRLAELQ
YSRNDQAFGRGTFRVRGEIIDIFPAESEDIALRVELFDEEVERLSLFDPLTGHIVQVVPR
YTIYPKTHYVTPRERILQAMEEIKVELAERRQVLLANNKLLEEQRLAQRTTFDLEMMNEL
GYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVIDESHVTIPQLGGMYRGDRARKET
LVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGNYELEKSGGEIIDQVVRPTGLLD
PQLEVRPVTTQVDDLLSEIRKRSAISERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNLNGKAILYGDKITPSMERAINETQRRREKQQAYNEQHGIVPQGLNKKIGDILQIG
QPTHGRGKGRGKKAAEPAAQYQQLSPKALDQKIRELESQMLAHAQNLEFEEAAHLRDEIH
ALREQFIAAS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagagttcaaactgcattctgccttcaaacccgccggcgaccagcctgaggcg
atacgccgtctgaaagaggggctggaggacgggctggcgcaccagacgctgctgggggta
acggggtccggcaagacgtttaccatcgccaacgtgattgccgatctcaaccgcccaacc
atggtgctggcacccaataaaacactggcggcgcagttgtatggcgagatgaaggcgttt
ttcccggagaatgcggtggagtatttcgtctcttactacgattactaccagcctgaagcc
tatgtgccgagctccgatacctttatcgagaaggacgcctcggttaacgaacatatcgaa
cagatgcggttgtccgccaccaaggcgctgctggagcggcgcgacgtggtggtggtggcg
tcggtgtccgctatttatggtctgggcgatccggacctttacctgaaaatgatgctgcac
ctgacgcaggggatgctgattgaccagcgcgccattctgcggcggctggcggagctacag
tactcccgcaacgatcaagcgtttgggcgcggtacgtttcgggtgcgcggcgagatcatc
gatatttttcccgccgaatccgaagatattgcattgcgggtcgagttgttcgatgaggag
gtggagcggttgtcgctgttcgacccgctcaccggccacattgtgcaggtggtgccgcgt
tacaccatttatcccaaaacgcattacgttacgccgcgtgagcgcatcctgcaggcgatg
gaagagatcaaggtcgagttggcagagcggcgtcaggtgttgctcgccaacaataaattg
ctggaggagcagcggctggcgcagcgtactaccttcgatctggaaatgatgaatgagctg
ggctattgctccggcattgaaaactactcccgctttctgtctggccgcgggccgggcgag
ccgccgccaacgctgttcgactacctgccggctgatggtctgttggtgatcgacgagtcc
cacgtcaccatcccgcaactgggcggcatgtaccgtggcgaccgggcgcgtaaggaaacg
ttggtggagtacgggtttcgcctgccgtcggcgctggacaaccggccgatgaaattcgag
gaatttgaggcgctggcgccgcaaaccatttatgtttcggcgacgccgggcaattacgag
ctggaaaaatccggcggcgagataatcgatcaggtagtgcggccgaccggcctgctggac
ccgcaactggaagtgcgcccggtgactacccaggtagacgacttgttgtcggaaatccgc
aagcgttccgccatcagtgaacgcgtgctggtcaccacgttgaccaagcgcatggcggaa
gacttgaccgaatatctggaggaacacggcgagcgggtacgctacctgcactcggatatc
gataccgtagagcgggtggagatcattcgcgatttgcgtctgggcgagttcgacgtgttg
gtaggcatcaacctgctgcgtgaagggctggacatgccggaggtgtcgctggtggcgatt
ctggacgccgataaagaaggcttcctgcgttctgaacgctcgctgatccagaccatcggc
cgtgcggcgcgtaacctcaacggcaaggcgattttatacggcgataagattacgccgtcg
atggagcgcgccatcaacgaaacccaacgtcgccgcgagaaacagcaggcgtacaacgag
caacacggcatcgtgccgcagggcctgaacaagaagattggcgatattctgcagattggt
cagccaacccatggccgggggaaagggcgcggcaagaaagcggcggagccggcggcgcag
tatcagcaactgtcgccgaaagcgctggaccagaaaatccgcgagctggaaagccagatg
ctggctcatgcacagaatctcgagttcgaagaggccgcccatttgcgcgacgaaatccac
gcgctgcgcgagcagtttattgcggcgtcctga
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integrated database retrieval system
