Durio zibethinus (durian): 111274140
Help
Entry
111274140 CDS
T05242
Name
(RefSeq) LOW QUALITY PROTEIN: regulator of nonsense transcripts UPF3-like
KO
K14328
regulator of nonsense transcripts 3
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03013
Nucleocytoplasmic transport
dzi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111274140
03015 mRNA surveillance pathway
111274140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dzi03019
]
111274140
Messenger RNA biogenesis [BR:
dzi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
111274140
mRNA cycle factors
P-body specific factors
111274140
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_2
Motif
Other DBs
NCBI-GeneID:
111274140
NCBI-ProteinID:
XP_022714515
UniProt:
A0A6P5WEQ8
LinkDB
All DBs
Position
Unknown
AA seq
632 aa
AA seq
DB search
MKEPLRRTKVVISHLPPSLTQSFLFSQIDDRFSDRYNWFSFRLGKSSHKHQRYSQAYINF
KRPEDVLEFAEFFDGHTFVNEKGTQFNAIVEYAPSQCVPKPGTKKDGREGTIFKDPDYLE
FLKLIANPVENLPSAEIQLERKEAELSGASKETPVVTPIMQFVHQKRAAESGTQGSITLR
KVGRKAAASTSKSGSSSKRGSEKTSLTIGLKVFPSSPLSVLPTKGEKTVFSEATSFPYPI
PAKDSESDRPIYYSYPHWLTMNSFLLIQETEKEEICKRYQESPQHCIIKAEILIVVICFW
NQRLEKLSKNGSHNCYILKDSAKGAKKSNFFVASKQEDQSETNVAKEIRENGTVCGIDGP
VTGITFSADSGKKKILLLKPKDREAPHVPEGASEQQGASSPVANSPGSTAPRQSQRREAG
GKLVRSILLSNEVGQNQSSAAVQPQQKTETTSLDNVKRHPRPANMRLGMNGHVSNEMPAL
KSDGDTKRYSYDKFIKKGLYGSGSGSEKHEKRTRNKDRPDRGVWAPLHRSDVSQASEERL
TPSVLQSAQNSHNSIEVIQGEMKGNIPNGSSGPNIPLENGXNGHFSWRPAAHNIKDDGSV
ISTEIKSSKRGGGSSSGAHEKQVWVQKSSSGS
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagccgttgcgaagaaccaaagtggtgataagccatctgccaccgtcactcacc
caatcatttctcttctctcaaatcgacgatcgtttctctgatcgttacaattggttctcc
ttccgtctcggcaagtccagccataagcatcagaggtactcacaagcctacataaacttc
aagagaccagaagatgtcttagagttcgctgagttctttgatgggcatacatttgttaat
gagaaaggtacccaatttaatgccattgttgaatatgctccttcgcagtgtgtcccaaag
ccaggcactaaaaaggatggtcgtgaaggaaccattttcaaagatcctgattatctggaa
tttctcaaactgattgcgaaccctgttgagaatcttcctagtgctgagattcagttggaa
agaaaagaagcagaactatctggcgcttcaaaagaaacccctgttgttacaccaataatg
caatttgtgcatcagaaacgagctgctgagagtgggactcaggggtcaatcactctaaga
aaggtcggcagaaaagctgccgcatctacaagcaagtctggatcaagtagcaagcgtggc
tctgagaagacaagcttaaccattggattaaaagtttttccatcctcacccctttctgtc
cttcctactaaaggagagaagacagttttcagtgaggcaacttctttcccctatcccata
ccagcaaaagacagtgaatctgaccgcccaatctattattcttatccacactggctaacc
atgaatagcttcctcttaatccaggagactgaaaaagaagaaatttgtaagagatatcag
gaaagccctcaacactgcataataaaagctgaaatattgatagttgtcatttgtttttgg
aaccaaaggcttgagaaattatctaaaaatggaagtcataactgttatattctaaaagac
agtgcaaaaggtgcaaaaaagtccaatttttttgtagcatccaagcaagaggatcaatca
gagactaatgttgcaaaagaaataagagagaacggaactgtctgtggcattgatggtcct
gtaactggaatcactttttctgctgattctgggaagaaaaagatcctgctcctaaaacca
aaagatcgagaggctcctcatgtgccagagggtgcatctgagcagcagggtgcatcatct
cctgtagcaaattcacctggttcaactgctccaagacagagtcaaagacgtgaggctggt
ggaaagttagtaaggagcatacttttgagtaacgaagtgggccaaaatcaatcttcagca
gcagtccagcctcagcagaaaactgaaactacgagtctggacaatgtcaagagacatccc
cggcctgctaatatgcgattgggtatgaatggtcatgtctctaatgaaatgcctgcattg
aaatctgatggtgatacgaaaagatattcatatgataagttcatcaaaaagggtctttat
ggttcaggttctggaagtgagaaacatgaaaaacgtacaagaaataaggataggcctgat
cgtggggtgtgggcccctcttcatcgttctgatgtttcacaagctagtgaggagcgcctg
acaccctctgtgttacaatctgcacagaactctcataattccattgaagttatccaagga
gaaatgaaaggcaacatacctaatggaagtagtggacctaatattccgttagaaaatggt
tagaatggacattttagttggcgtcctgcagcccataacataaaggatgatgggtctgtc
atatcaactgagatcaagtcttccaaaagaggaggtggtagtagctctggagcccatgag
aaacaagtttgggttcagaagtcatcttcaggttcttag
DBGET
integrated database retrieval system