Durio zibethinus (durian): 111303871
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Entry
111303871 CDS
T05242
Name
(RefSeq) general transcription factor IIH subunit 2-like
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03022
Basal transcription factors
dzi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111303871
09124 Replication and repair
03420 Nucleotide excision repair
111303871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dzi03021
]
111303871
03400 DNA repair and recombination proteins [BR:
dzi03400
]
111303871
Transcription machinery [BR:
dzi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111303871
DNA repair and recombination proteins [BR:
dzi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111303871
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
IBR
Tfb4
Motif
Other DBs
NCBI-GeneID:
111303871
NCBI-ProteinID:
XP_022756093
UniProt:
A0A6P5ZTE6
LinkDB
All DBs
Position
Unknown
AA seq
423 aa
AA seq
DB search
MNNGGGKRINGGTEEDDDEDDVNGDLDAWERTYTDERSWESLQEDESGLLRPIDNKALYH
SQYRRRLRSLSSIATAARIQKGLIRYLYVVIDLSRAASEMDFRPSRIAVIAKHVEAFIRE
FFDQNPLSQVGLVTIKDGVAYCLTDLGGSPESHIKALMNKLECSGDSSLQNALDLIDGYL
NQIPSYGHREVLILYSALSTCDPGDIMETIQKCKKSKIRCSVIGLAAEMFICKHLCQETG
GIYTVALDESHFKELILEHAPPPPAIAEFAIANLIKMGFPQRAAEGSMSICSCHKEAKVG
AGYTCPRCKARVCELPTECCICGLTLVSSPHLARSYHHLFPIAPFDEVPPSHLNDPNNKL
QRNCFGCQQSLLNPGNKPGLFVVCPNCKRRFCLDCDIYIHESLHNCPGCESFRHSKPVIS
NEE
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaataatggagggggaaaacggatcaatggcggaacagaagaggatgatgatgaagac
gatgtgaatggggatcttgatgcgtgggagagaacttataccgatgagaggtcgtgggaa
tctttgcaagaggacgagtcagggctgcttcgccccattgacaacaaggccctttatcat
tctcagtaccgtaggcgacttcgttccctttcttcaattgccactgctgctcggatacaa
aagggcctcattcgttatctctatgttgttattgatctttccagggcagcttcagagatg
gattttcgaccaagtcgaattgctgtcattgcaaaacatgttgaagctttcatcagggag
ttttttgaccagaatcctcttagtcaagttggccttgtgactataaaagatggggttgct
tactgcttaacagatctcggtggtagtcctgagtctcatatcaaagctttgatgaataag
ttggaatgttcgggtgattcctccttacagaatgcattggatctcatagatgggtatctg
aatcaaattccatcatatggtcatcgtgaagttcttatattatattctgctctcagtacc
tgtgatcctggagatataatggagaccattcagaaatgcaagaaatctaaaataagatgt
tcagttattggccttgctgcagaaatgtttatatgcaaacatctttgccaggaaactggg
ggaatatacactgttgcattggatgagtcccactttaaagagctaatattggagcatgca
cccccaccaccggccatagcagaatttgcaattgctaatttgatcaagatgggattccca
caaagagcagctgagggttctatgtcgatttgttcatgtcataaagaagccaaggtaggt
gcaggttacacttgtccaagatgtaaagcccgtgtatgtgagcttcctacagaatgttgt
atctgcggattgacactcgtgtcttcaccccatttggctagatcatatcatcatctcttt
cccatagccccttttgatgaggtgcctccatctcatttaaatgatccaaacaacaaactg
caaagaaattgttttgggtgccaacaaagcctcctcaatccaggaaacaaacctggcctt
ttcgttgtgtgcccaaattgcaaacggcgcttctgtctcgactgtgacatttacattcac
gagagtttgcacaattgcccaggttgtgaaagcttcaggcattccaagcctgtcatctca
aatgaagaatga
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