Durio zibethinus (durian): 111308090
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Entry
111308090 CDS
T05242
Name
(RefSeq) tetratricopeptide repeat protein SKI3 isoform X1
KO
K12600
superkiller protein 3
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111308090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dzi03019
]
111308090
Messenger RNA biogenesis [BR:
dzi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
111308090
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_11
TPR_2
TPR_1
TPR_14
TPR_17
TPR_16
TPR_8
TPR_9
TPR_19
TPR_12
TPR_7
DUF6584
TPR_15
BTAD
Motif
Other DBs
NCBI-GeneID:
111308090
NCBI-ProteinID:
XP_022762474
UniProt:
A0A6P6AC59
LinkDB
All DBs
Position
Unknown
AA seq
1184 aa
AA seq
DB search
MKTTQEEEERRRLEELVESNPDDPSLHFQLGLCLWECETEKERAAEHWVLSAKQNPKNAA
AFKYLGHYYATVSVDVQRAIKCYQRALSLHPDDSDAGEALCDLLDRQGKESLELAICKDA
SHNSPRAFWAFRRLGFLQVHHKKWSEAVQSLQHAIRGYPTSPDLWEALGLAYHRLGMFTA
AIKSYGRAIELEDTRVFALVECGNIFLMLGSFRKGIEQFQQALKITPQNISALCGLASGL
LGLSKECINSGAFRWGASLLEGACKVAEASIQSAGNSSGTWKLHGDIQGCFPPGQLAYAQ
GYPWMEESQSLEYKAETFEKSIYSWKNTCCSAAISAKNSYQRALHLAPWQANIYIDIAIS
SNLISSFYKDHTHDKCTWQLSEKMTLGALLIESDNFEFWVALGCLSECNALKQHAFIRGL
QLDVSIANAWAYLGKLYREENEKKLARQAFDCARGIDPSLALPWAGMSADTHSGESTPDD
AFESCLRAVKILPLAEFQIGLAKLALLSGNLLSSQVFGAIQQAVQRAPHYHESHNLNGLV
CEARFHFQAAIASYRLARYTINISAGTLLKAHLKVISINLARSLSKAGNAIGAVQECEDL
EKEGMLDAEGLQIYAFSLWKLGEHEAALSMTRTLAASIPTMDRTSAAVSVSFICRLLYYI
SGQDLAIVSIMKMPKELFQSSKISIIVSAINALDQNYRLESIVSSSRYFLASHEEITGMH
YLIALSKLIKHGTEHHLEFQSGVSHLRKVLHMYPNSNLIRNLLGYLLMASEIWGNTHVAS
TYSIIDSSDSRNKEGLKLAWEIFSAGAVACHSMGNSEPRFSFPTCGCQCQSGFGAMKELQ
KWLRQEPWNRNGRYLLVLNLLQKAREERFPINLCVMLERLIIVALSDEFYSGKEASCQYQ
KFQLYLCASEILLQRGNIISCINHAKDASALLLPNSYQFFGHLLLCRAYAAEGNFKNCKE
EYERCLGLKTDFLVGWICLKVMESQYELQTVSNVVELAFKESSRGRNNSWNMWMAVYTLM
MGMICIWNQDFLSAEDFLEQSCSLASAESCIFLCHGVTSLEIARRYRYSQFLSSAIRSLS
RAYVTSSVPIPFISALLAQAEGSLGYRKKWERNLRLEWFSWPPEMRPAELFFQMHLLARQ
IESESDSSSRVEYCQSPQQWVLRAIHTNPSSLRYWKVLRSLCNN
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaacgcaggaggaagaagaaagaaggcggctggaagagttggtggaaagcaat
cccgatgacccctcccttcattttcaacttggactatgcttgtgggaatgtgagacagag
aaagagagagcggcggagcattgggtgctttccgcaaaacaaaaccctaaaaacgcagca
gccttcaaatacttgggccattactacgccactgtttcggttgatgtccagagagccatc
aaatgttatcagagagctctatcccttcatcccgatgattccgatgctggggaagctttg
tgtgatttgttggaccgacaaggcaaggagtccttggagctcgcaatttgcaaagatgct
tctcacaactcccccagggctttctgggcattccgccgattgggttttctccaggtgcat
cataagaaatggtctgaagctgtacaaagtcttcaacatgccattcgcggctatcctacc
tctcctgatttgtgggaagctcttggtcttgcctaccatcgacttggcatgtttactgcc
gcaattaagtcctatgggcgtgcaattgaattggaagatacaagagtctttgcgctggtt
gaatgtggaaacatctttttgatgcttggttcctttagaaagggaattgagcaatttcag
caagcactgaagatcacaccacaaaatatatctgcactctgtggacttgcatctgggctt
cttggtctgtcaaaagaatgtataaattcaggagcatttagatggggagcttcattgtta
gagggtgcatgcaaagtagcagaagcaagcatccaatcagctggtaattcatcaggtact
tggaagttgcatggtgatattcaggggtgtttccctcctggccagcttgcatatgctcaa
ggttatccatggatggaggagagccagagtttagaatataaggctgaaacttttgagaag
tccatatattcgtggaagaatacttgttgttcagctgctatatctgccaaaaactcttat
caacgagctttgcacttagccccatggcaggctaacatctatattgacattgccattagt
tccaatcttatctcttctttttacaaggatcatacacatgataaatgtacctggcagcta
tcagagaagatgacattgggggctttgctgatagagagtgacaactttgagttctgggta
gctttgggctgtttgtctgagtgtaatgcattgaaacagcatgcttttatcaggggactg
cagttggatgtgtctatagctaatgcatgggcgtatcttggaaagctttatagagaagag
aatgagaagaaattggctaggcaagcttttgactgtgctagaggtatagatccatcacta
gcattaccatgggctggcatgtcagctgatactcattctggggagtcaacaccagatgat
gcttttgagagctgcctacgtgctgtgaagatattgcctcttgcagagttccaaattggt
ctagctaagcttgctttgctttcagggaaccttttatcttcacaggtatttggagctatc
cagcaggcagtgcaacgtgcaccccattatcatgaatcccataatttaaatgggctagta
tgtgaggctcgttttcattttcaagctgccattgcttcttataggctagctcgctatacc
atcaacatttctgcaggcactttgctcaaagctcatttgaaagtcatatcaattaatttg
gccagatcacttagtaaggcagggaatgccataggtgctgtgcaagaatgtgaagacttg
gagaaagaaggtatgcttgatgcagaaggtttgcaaatatatgctttctccttatggaaa
ctgggagagcatgaggcagccctctccatgactagaaccctagctgccagcattcctacc
atggataggacatctgcagctgtgtctgttagtttcatttgtagattgctgtactacatt
tctggacaggatttagcaattgttagcataatgaaaatgccaaaggaactatttcagagt
tcaaaaataagcattattgtctctgccattaatgctctggatcagaattacaggctggaa
tcgattgtttcaagcagtcgttactttcttgcatcacatgaggagattactggcatgcac
tatctaatcgcacttagtaaactaattaaacatgggacagagcaccaccttgaatttcag
agtggagtcagtcatcttagaaaagttcttcacatgtaccctaacagtaatttaataagg
aacctacttggttatcttttgatggccagtgaaatatggggaaatactcatgtggcaagt
acatactctatcattgattcttctgactctaggaacaaagaaggcttaaaattggcatgg
gagatcttcagtgctggggcagttgcttgccattcgatgggcaatagtgaaccgcggttt
tctttcccaacatgtggctgtcaatgccaaagtggttttggagctatgaaagagctacag
aagtggttacgccaagagccatggaaccgtaatggccgatacttgcttgtgcttaatctt
ttacagaaagcacgtgaagagagatttcccataaacctttgtgtcatgcttgaacgtctc
attattgtggctctttctgacgagttctattctggaaaagaagcctcttgtcaatatcag
aagtttcagctttatttatgtgcttctgaaattcttttgcaaagggggaatataattagc
tgtatcaaccatgcaaaagatgcttcagcacttttgcttcctaatagctaccagtttttt
ggacacttactattatgtcgtgcctatgctgcagaaggcaattttaaaaattgcaaagaa
gagtatgaaagatgcttggggcttaagacagattttcttgttggttggatatgcctaaaa
gtaatggaatctcaatatgaactgcaaactgtttcaaatgttgttgagttagccttcaag
gaaagctcaagagggaggaataattcatggaatatgtggatggctgtatatactttaatg
atgggtatgatatgtatatggaatcaggattttctttctgcagaggattttctggagcaa
agttgttcgttagccagtgctgagagctgcattttcctttgccatggtgtcacttctctg
gagattgcacggaggtatcgttattcacaatttttgtctagtgccataaggagtctcagt
agagcttatgtgacttcttcggtcccaataccttttatctcagcattgttggcccaagca
gaaggaagccttggttataggaaaaaatgggagagaaaccttcgtcttgaatggttttct
tggccaccagaaatgagacctgcagagctcttttttcaaatgcatttgcttgcaagacag
attgaatctgagtctgacagttcatccagggtagagtactgtcaaagtccccagcaatgg
gttcttcgagcaatacacacaaacccttctagcttgagatattggaaagttctgcgaagc
ttatgtaacaactag
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integrated database retrieval system