Durio zibethinus (durian): 111310204
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Entry
111310204 CDS
T05242
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 42
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111310204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dzi03041
]
111310204
Enzymes [BR:
dzi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111310204
Spliceosome [BR:
dzi03041
]
Complex A
U2 snRNP components
U2 related factors
111310204
Complex B
111310204
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
111310204
NCBI-ProteinID:
XP_022765162
UniProt:
A0A6P6AJW7
LinkDB
All DBs
Position
Unknown
AA seq
1098 aa
AA seq
DB search
MEDSEKRRHRERRDRDRDRERRRSEREKSSDSDREKEREKEKHRRERKDREREKEKERER
AREKEREREREKREREREREKREREREKERERERKSREREREREREKRREYNSDDSKEEK
ERHRKRRRRERDDDDDGDDYKERESKSTRGESPAKKKSGEDELEKKEKKSREQEMEDEQQ
RLDEEMEKRRRRVQEWQELRRKKEESEREKRGEGNVEEQEAKVGKAWTLEGESDDDEVGS
PTKLYTNMDVDDNENSKPDSKEGGDGMMEGGDSDNGEDKMVVNQNGGNGIAEDDDEIDPL
DAFMNSMVLPEVEKLSNAVVDPPPTADDDKNGNFKDKKDGFSNGGQQPKKDSNKALGRII
SGEDSDSDYGDVENDEENLEDEDDDEFMKRVKKTKAEKLSIVDHSKIDYKPFRKNFYIEV
KEISRMTPEEVAAYRKELELKLHGKDVPKPIKTWHQTGLTSKILETIRKLNYEKPMPIQA
QALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQPPVVAGDGPIGLIMAPTRELVQQ
IHSDIKKFAKALGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSGGKISNL
RRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVE
IQVGGRSVVNKDITQLVEMRPESERFLRLLELLGEWCEKGKILIFVHTQEKCDALFRDLL
KHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLIATSVAARGLDVKELELVINFDVPNHY
EDYVHRVGRTGRAGRKGCAITFISEDDARYAPDLVKALELSEQVVPDDLKALADGFMAKV
NQGLEQAHGTGYGGSGFKFNEEEDEKRKAAKKAQAKEYGFEEDKSDSEDEDEGVRKAGGD
ISQQTALAQIAAMAAATKASTALMQNTLSSVQLLPNAVLPVSLPGVLGVSMPGTAAVVPG
SGLPGLPNEEAARKAALQAALNLQHNLAKIQADAMPEHYEAELEINEFPQNARWKVTHKE
TLGPISEWTGAAITTRGQFFPPGRIPGPGERKLYLFIEGPTELSVKRAKAELKRVLEDIS
HQSLQLPGGTQPGRYQVL
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atggaagattcggaaaagagaaggcaccgtgagagaagagatagggatagggatcgagaa
cggcgccgttccgagagagagaagagcagtgattccgatagggaaaaggaaagggaaaaa
gaaaaacaccggagggagaggaaagatagggaacgggaaaaagaaaaagagagggaaagg
gcaagggaaaaggaaagggagagggaaagggaaaaaagggaaagagaaagggaaagggag
aagagggaaagagaaagggaaaaggaaagggagagagagaggaagtcgagggaaagggaa
agggaaagggaaagggagaagcggagggaatataatagtgatgatagtaaggaggaaaag
gaacgacataggaagcgtcgaaggagggaacgagacgatgatgatgatggtgatgattat
aaggagagagaaagcaaatcgactagaggagaaagtcctgctaagaaaaagagtggtgag
gatgagttggagaagaaagagaagaagagtagggaacaggagatggaagatgagcagcaa
agactggacgaggagatggagaaacggaggagaagggttcaggaatggcaggagttaagg
aggaagaaggaagaatcagagagggaaaaacgtggggaagggaatgtggaagagcaggag
gctaaggttggtaaagcttggactctggaaggagaatcagatgatgatgaagtaggttct
ccaacaaaattgtatacaaatatggatgttgatgataatgagaattcgaagcctgatagt
aaggaaggtggagatggaatgatggaaggaggagattctgataatggggaagataaaatg
gttgttaaccaaaatgggggcaatgggattgctgaggatgatgatgaaattgatccatta
gatgcttttatgaattcaatggtgttacctgaagttgagaaactaagtaatgcggttgtt
gatcctcctcctactgctgatgatgataaaaatgggaactttaaggataaaaaagatggc
ttcagtaatggtggacagcaaccaaagaaagattctaacaaggcacttgggagaattatt
tctggggaagactcggattcagattatggggatgttgagaatgatgaagagaatttagaa
gatgaagatgatgatgagttcatgaaaagggtaaagaagacaaaagctgaaaaactatct
attgttgatcactcgaagattgattataaacctttcaggaaaaatttctatattgaagtg
aaggagatatcaagaatgacacctgaagaagttgctgcttacaggaaggaattggaattg
aagttacatggaaaggatgtgcccaaaccaatcaaaacctggcatcaaactggactcaca
agtaaaatattggagacaataaggaaacttaattatgagaagccaatgccaattcaagct
caggcactgcccataattatgagtggtcgagactgcattggcatagcaaaaaccggctct
ggcaaaacccttgcttttgtgctaccaatgttaaggcatatcaaagatcagccacctgta
gtagctggagacgggcctattgggctcatcatggcacctacaagagagcttgtccagcag
attcatagtgatataaagaagtttgccaaggcattgggaatcagatgtgtccctgtgtat
ggagggtctggtgttgcccagcagattagtgaattaaagcggggaacagagattgttgtc
tgtactccaggtaggatgattgatatactttgtactagtgggggaaaaattagtaatctg
cgtagagtaacatatttggttttggatgaagctgacagaatgtttgatatgggttttgaa
cctcaaatcactcgaattgttcaaaatattcgacctgatcgccaaactgtactattttct
gccactttccctcgtcaggttgagattttggcacgtaaagtgttgaataaacctgttgaa
atacaggttggtgggagaagtgttgtgaacaaggacataactcagttggtcgagatgagg
ccagaaagtgaaaggttcctgagattgttagaacttctaggtgaatggtgtgagaagggg
aaaattttgatttttgtccacacccaagaaaagtgtgatgctttgtttagggatttactc
aaacacggttacccttgcctgtcacttcatggggccaaggatcagacagatcgtgaatcc
actatttctgattttaagagtaatgtctgcaatttgttgattgcaacaagtgttgcagca
aggggtttagatgtgaaggagcttgaattagtgattaattttgatgttccaaatcattat
gaagattatgttcaccgtgttggtaggacaggtagagctggccggaaaggctgtgccatc
acatttatctccgaggatgatgcaagatatgcaccagatcttgtaaaagctttggagctc
tctgagcaagttgttcctgatgacctgaaagctcttgctgatggctttatggcaaaagtc
aatcagggacttgagcaggcccatggaacaggttatggtggaagtggttttaaattcaat
gaagaggaggatgaaaagagaaaagcagcaaagaaagcacaagcaaaagaatatgggttt
gaggaagacaagtcagattctgaagatgaagatgaaggggtgcggaaggcaggtggtgac
atctcacagcagacagcgcttgctcaaatagctgccatggctgctgccaccaaagctagt
actgctttgatgcagaacactctatcatctgttcaactgcttcccaatgctgtattgccc
gtttctcttcctggtgtacttggtgtgtcaatgccaggtactgcagcagttgtgcctggg
agtgggctgcctggtcttccaaatgaagaggctgctcgaaaagctgcattgcaagctgcc
cttaacttgcagcataacttggcaaagattcaagctgatgcgatgccagaacattatgaa
gcagagttggagataaatgaattcccccagaatgctcgatggaaggttacccacaaggaa
actttgggtccaatatcagaatggactggagctgccattaccaccaggggccagtttttc
ccacctggtcggatcccaggaccaggggaacgcaagctttacttgttcattgagggacct
acagagctatctgttaagagagctaaggctgaactaaaacgtgtcttggaagatatctca
caccagtccttacaacttcctggtgggactcaacctggcagataccaggttttgtag
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