Duganella zoogloeoides: SR858_04840
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Entry
SR858_04840 CDS
T09628
Name
(GenBank) RluA family pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
dzo
Duganella zoogloeoides
Brite
KEGG Orthology (KO) [BR:
dzo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dzo03009
]
SR858_04840
Enzymes [BR:
dzo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
SR858_04840
Ribosome biogenesis [BR:
dzo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SR858_04840
BRITE hierarchy
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
WQH05670
LinkDB
All DBs
Position
1108396..1109409
Genome browser
AA seq
337 aa
AA seq
DB search
MKMQNDVVPPSHSATTGAVPSSQVPLQAQFVTISEEDAGQRIDNYLLRICKGVPKSHVYR
ILRSGEVRVNKGRIDQLYRLVEGDMVRIPPIRIAEKADATHVPAAEFKVIFEDSHLLVID
KPAGVAVHGGSGVSFGVIEQLRASRPDAKFLELVHRLDRDTSGLLLLAKKRSALTNLHEQ
MRDGDTDKRYLTMVAGDWKNARQHVKLALHKYSTAEGERRVAVNPDGMPSHTVFSLLKKF
AGFALLEAELKTGRTHQIRVHLSASGFPILGDDKYGDFALNRALLKADAQRGALKRMFLH
AHQITFTHPDSGKIMTLNAPLAAECERFLVSLGKPIN
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgcaaaatgatgttgtccccccgtcacattccgcgaccaccggcgcagtaccc
tcgtcgcaagtcccgctgcaggcgcagttcgtcactatttccgaagaagacgctggacaa
aggatcgataattacctgttgcgaatttgcaaaggtgtaccgaagagtcacgtctatcgc
atcctgcgttcgggcgaggtgcgcgtcaacaaggggcgtatcgaccagttgtatcgcctg
gtcgaaggcgatatggtccgcattccgccaatccgcatcgcggaaaaagccgacgccacc
cacgtaccagccgccgaattcaaggtgattttcgaagacagccacctcctggtgatcgac
aagccggccggcgtggccgtgcatggcggctccggcgtgtcgttcggcgtgatcgaacaa
ttgcgcgcctcgcgccccgacgccaagttcctggaactggtacaccggctcgaccgcgac
acctcgggtttgctgttgctggccaaaaagcggtcggcactgaccaatctgcacgagcag
atgcgcgatggcgacaccgacaagcgttatctcaccatggtggcgggcgactggaaaaat
gcgcggcagcacgtcaaactggcgctgcacaagtattccaccgccgagggcgagcgccgc
gtagcggtcaatccagacgggatgccgtcgcataccgtgttttcgctgctgaaaaagttc
gcaggcttcgccttgttggaggcggaactgaaaaccggccgcacgcaccagatccgcgtg
cacctgtcggcgtccggtttcccgatcctcggcgacgacaagtacggcgatttcgccctc
aaccgcgcgctattgaaagccgatgcgcagcgcggcgcgctcaagcgaatgttcctgcat
gcgcatcaaattacgttcacccatccggactccggaaaaatcatgacgctgaacgcacct
ttagccgccgaatgtgagcgattcttggtaagcttgggcaaaccaattaactaa
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