Duganella zoogloeoides: SR858_18775
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Entry
SR858_18775 CDS
T09628
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
dzo
Duganella zoogloeoides
Pathway
dzo01501
beta-Lactam resistance
dzo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
dzo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SR858_18775
01503 Cationic antimicrobial peptide (CAMP) resistance
SR858_18775
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dzo02000
]
SR858_18775
01504 Antimicrobial resistance genes [BR:
dzo01504
]
SR858_18775
Transporters [BR:
dzo02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SR858_18775
Antimicrobial resistance genes [BR:
dzo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SR858_18775
BRITE hierarchy
Motif
Pfam:
ACR_tran
Patched
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
WQH03093
LinkDB
All DBs
Position
complement(4244816..4247962)
Genome browser
AA seq
1048 aa
AA seq
DB search
MSRFFIDRPIFAWVIAIVIMLGGVLAILGLPIAQYPAIAPPSISISGSYPGASAKTVEDA
VTQVIEQKMKGIDGLRYMASSSDSSGGISITLTFESGTNPDIAQVQVQNKLQLATPLLPT
AVTQQGLVVNKATKNFLLVIGFVSEDGSMNQADIGDYVTASVLDPISRVEGVGDVTNFGS
QYAMRIWLDPAKLQSYQLTPADVTTAITAQNTEVSAGELGGAPAVAGQQLNATVSAQSRL
QTAEQFGAILLKTTTNGATVYLRDVAKMELGRENYSILARYNGNAATGIAIKLATGANAL
DTAEAVKAKIAQMEKQFPQGLKAMVAFDTTPFVKISIEEVVKTLIEAVILVFLVMYLFLQ
NFRATLIPTMAVPVVLLGTFGILSVLGYSINTLTMFAIVLAIGLLVDDAIVVVENVERIM
TEEGLSPIEATRKSMGQISGALVGIAMVLSAVFVPMAFFGGSTGVIYRQFSITIVSAMVL
SVIVAMIFTPALCATMLKQVPKGHAMATTGFFGWFNRNFDRGNRKYQGIVGSIINKSGIS
LVVYALIVAVMAFVFLRLPTSFLPEEDQGVLFTQIQLPTGATQERTLKTIEKVEQHFMNN
EKESVASVFAVAGFSFAGNGQNTGIAFVRMKDWSERKGKDHAVSAIAGRAMGAFSQIKDA
MVFAFAPPAVLELGNASGFDLMLQDTGGVGHEALMAARNQMLGMAAQSKVIVGVRPNGQE
DTPQYKITVDQQKAVALGLAIADVNRVLSTAWGSAYVNDFIDRGRVKKVYIQGQAEARMV
PEDLNKWFVRNTAGEMVPFSAFSHGEWIYASPRLERYNGLPSVEILGQPAPGQSSGAAMA
EVESMAAKLPPGIGYEWTGLSTEERDSGSQTTQLYAISILIVFLCLAALYESWSVPFSVL
LIVPLGILGTVLATFLFKLSNDVYFQVGLLTVVGLGAKNAILIVEFAKDLQEQGVELKEA
TLQAVHTRLRPILMTSIAFGLGVLPLAISSGAGSGSQNAIGVGVLGGMLTATFLGIFFVP
LFFVLVRGRFGKTKAKPAPDATPVVEAH
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtttctttattgatcgcccgattttcgcctgggtgatcgcgatcgtgatcatg
ctgggtggcgtactggccatcctcggcctgccgatcgcccagtaccccgccatcgcaccg
ccgtcgatctcgatcagcggctcgtacccgggcgcttccgccaagacggtggaagacgct
gtgacccaggtcatcgaacagaagatgaagggtatcgacggcttgcgctacatggcctcg
tcctccgattcgtcgggcggcatcagcatcacgctgacgttcgaatccggcaccaacccg
gatatcgcgcaggtgcaggtgcagaacaagctgcaactggccacgccgctgctgcctacc
gccgtgacccaacagggcctggtggtcaacaaggctaccaagaacttcctgctggtgatc
ggcttcgtgtcggaagacggttcgatgaaccaggccgacatcggcgactatgtcaccgcc
agcgtgctcgatccgatctcgcgcgtggaaggcgtgggcgacgtgaccaacttcggttcg
caatacgcgatgcgcatctggctcgatccggccaaactgcaaagctaccagctgactccg
gcagacgtgaccaccgcgattaccgcgcagaacaccgaggtgtccgccggtgaactgggc
ggcgcgccagccgtcgccggccagcagctgaacgccaccgtgtcggcccagagccgcctg
caaacggccgagcaattcggcgccatcctgctcaagaccaccaccaacggcgctaccgtg
tacctgcgcgacgtcgccaagatggaactgggccgtgaaaactactcgatcctggcccgt
tataacggcaatgccgcaaccggtatcgccatcaagctggcgaccggcgccaacgcgctc
gacaccgccgaggcggtgaaagccaagatcgcgcagatggaaaagcagttcccgcaaggc
ctgaaagccatggtggccttcgataccaccccgttcgtcaagatctcgatcgaagaagtg
gtgaaaaccctgatcgaagccgtgatcctggtgttcctggtgatgtacctgttcctgcaa
aatttccgcgccaccttgattccaaccatggccgtaccggtcgtgctgctcggtaccttc
ggcatcctgtcggtgctcggttactcgatcaatacgctgaccatgttcgccatcgtgctg
gccatcggcttgctggtcgatgatgcgatcgtggtggtggaaaacgtcgagcggatcatg
accgaggagggtctgtccccgatcgaggccacccgcaaatcgatgggccagatcagcggt
gcgctggtcggtatcgccatggtgctgtcggccgtgttcgtgccgatggcgttcttcggc
ggctccaccggcgtgatttaccgccagttctcgattacgatcgtctcggcgatggtgctc
tcggtgatcgtcgcgatgatcttcaccccggcgctgtgcgccaccatgctcaagcaagtg
ccgaaaggccatgcgatggccactaccggttttttcggctggttcaaccgcaatttcgat
cgcggcaaccgcaagtaccagggcatcgtcggctcgatcatcaacaagagcggcatttcg
ctggtggtatatgcgctgatcgtcgcggtcatggcgttcgtgttcctgcgcctgccaacg
tcgttcctgccggaagaggaccagggcgtgctgtttacccagatccagctgccgaccggc
gccacgcaagagcgcacgctcaagaccatcgaaaaagtcgagcagcacttcatgaacaac
gagaaggaatcggtggcatcggtatttgcggtggccggcttcagcttcgcgggtaacggc
cagaacaccggtatcgccttcgtgcggatgaaagactggtccgagcgcaaaggcaaggat
cacgccgtgagcgcgatcgcgggccgcgccatgggtgccttctcgcagatcaaggatgcg
atggtgttcgcgttcgccccgccagcggtgctggaactgggtaacgcatccgggttcgac
ctgatgttgcaggacaccggcggcgtgggccacgaggcgctgatggcggcgcgtaaccag
atgctgggcatggccgcgcagagcaaggtcattgtcggcgtgcgtccgaacggccaggaa
gatacgccgcaatacaagatcaccgtggaccagcaaaaagccgttgcgctgggcctggcg
atcgcggacgtgaaccgcgtgctgagcaccgcctggggttctgcgtatgttaacgacttc
atcgaccgtggccgcgtgaagaaggtgtacatccagggccaggccgaagcgcgcatggtg
ccggaagacctgaacaagtggttcgtgcgtaacaccgctggcgagatggtgccattctcg
gccttctcgcacggcgagtggatctacgcgtcgccgcgcctggaacgctacaacggcctg
ccgtcggtcgagatcctgggccagccggcgccgggccagagctcgggcgccgcgatggcg
gaagtcgaaagcatggcggccaagctgccgcccggtatcggctacgagtggaccggcctg
tcgacggaagaacgcgactccggttcgcaaaccacgcagctgtatgcgatctcgatcctg
atcgtgttcctgtgcctggccgcgctgtatgaaagctggtcggtgccgttctcggtgctg
ctgatcgtaccgctcggtattctcggtacggtgctggcgacgttccttttcaagctgtcg
aacgacgtgtacttccaggtgggtctgctgaccgtggtgggcctgggtgcgaagaacgcg
atcctgatcgtggaattcgccaaggacctgcaggagcagggcgtggaactgaaggaagcg
accctgcaggccgtgcatacgcgtctgcgtccgatcctgatgacgtcgatcgccttcggc
ctgggcgtgctgccgctggcaatcagcagcggcgccggttcgggcagccagaacgcgatc
ggcgtgggtgtgctgggcggcatgctgacggcgaccttcctgggcatcttcttcgtacca
ttgttcttcgtgctggtgcgcggccgctttggcaagaccaaggccaagccggcacctgac
gctacgccagtcgtggaggcacattaa
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