Escherichia coli ABU 83972: ECABU_c40170
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Entry
ECABU_c40170 CDS
T01995
Symbol
yiaJ
Name
(GenBank) hypothetical transcriptional regulator YiaJ
KO
K21602
IclR family transcriptional regulator, regulator of plant utilization
Organism
eab
Escherichia coli ABU 83972
Brite
KEGG Orthology (KO) [BR:
eab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eab03000
]
ECABU_c40170 (yiaJ)
Transcription factors [BR:
eab03000
]
Prokaryotic type
Helix-turn-helix
IclR family
ECABU_c40170 (yiaJ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HVO_A0261_N
TrmB
HTH_24
HTH_36
Rrf2
DUF7406
Motif
Other DBs
NCBI-ProteinID:
ADN48454
LinkDB
All DBs
Position
complement(4083615..4084463)
Genome browser
AA seq
282 aa
AA seq
DB search
MGKEVMGKKENEMAQEKERPAGSQSLFRGLMLIEILSNYPNGCPLAHLSELAGLNKSTVH
RLLQGLQSCGYVTTAPAAGSYRLTTKFIAVGQKALSSLNIIHIAAPHLEALNIATGETIN
FSSREDDHAILIYKLEPTTGMLRTRAYIGQHMPLYCSAMGKIYMAFGHPDYVKSYWESHQ
HEIQPLTRNTITELPAMFDELAHIRESGAAMDREENELGVSCIAVPVFDIHGRVPYAVSI
SLSTSRLKQVGEKNLLKPLRETAQAISNELGFTVRDDQGAIT
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagaagtgatgggaaaaaaagagaacgagatggcgcaggaaaaagagcgccca
gccggaagccagagtctgtttcgtgggttgatgctgattgagattttgagcaactatcca
aacggttgtccgttggcgcatctttcggagctggctggtttaaataagagtaccgtccat
cgcttattgcagggattacagtcctgcggctatgtgaccaccgcgcccgccgcagggagt
tatcgcctgaccaccaaatttattgccgtcgggcagaaggcgctatcttcgctgaatatc
attcatatcgccgctccgcatcttgaggctctgaacatcgccactggtgaaactattaac
ttctccagccgcgaagacgatcacgctattttgatttataagttggaacccacaaccggg
atgctgcgaacccgtgcctatataggccagcatatgccgctctactgttccgcaatgggc
aagatctacatggcgtttggtcacccggactacgtgaagtcatactgggaaagccatcag
catgagatccagccgttaacccgcaataccattaccgagctgcccgcgatgttcgacgaa
ctggcgcacattcgtgaaagtggagcggcgatggacagagaagaaaacgaactcggcgtc
tcctgtattgctgttccggtgtttgatattcatgggcgggtgccgtacgccgtgtcgatt
tcgctttcgacatcacgtctgaaacaggtgggagagaaaaatctcctgaaaccactgcgt
gaaaccgcgcaggctatttctaatgaactgggatttactgtcagggacgaccagggcgcg
attacataa
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