Eurytemora affinis: 111706901
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Entry
111706901 CDS
T07296
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
eaf
Eurytemora affinis
Pathway
eaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111706901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eaf03041
]
111706901
Enzymes [BR:
eaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111706901
Spliceosome [BR:
eaf03041
]
Complex A
U2 snRNP components
U2 related factors
111706901
Complex B
111706901
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
111706901
NCBI-ProteinID:
XP_023335616
LinkDB
All DBs
Position
Unknown
AA seq
990 aa
AA seq
DB search
MGKEKRRRSSSSSPAKKRDKSRERKRSKSRDRKKEKKEKKEKKERSRSRERRRSRDRKKS
RRSRSRETKSRGRDSQEIDDKAYSSHNKLDKDSEQARLENEMQRRRERIEKWRAEKKKGK
EPAVVEVKAEEEPEKVKKWSLEDEDSEEEETVVKKEEEIVDKKPEVKEEDDVDPLDAFMT
DISKEVRKMKGAMFKNAKGVVTKSKKEMKTEENGDAEKKKGMVIMMGVAKKKPDTVSKKP
EVMEQNEDALEYSSEDEKKDNLEDNLNKLKEKGKKVVAKVDHGGVEYPAFRKDFYIEVPE
LAKMTDLEVEDYRAELEGIKVKGKNVPKPIKNWPQCGVSSKILQLLKKHGYEKPTPIQAQ
AIPVCMSGRDMIGIAKTGSGKTLAFLLPLFRHIADQEELEEGDGPIAIIMTPTRELCLQI
GKECRKFAKSVNARAVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGKVTNLK
RITYLVLDEADRMFDMGFEPQVMRVLDNCRPDRQTVLFSATFPRQMEGLARRILKSPVEV
QVGGRSVVAKEVEQHVAVLEEDTKFLKLLEVLGEYSDQGSIIIFVDKQEHADGLLKVVII
LVDLNGETTIGINQINRDSTISNFKQGRVQILVATSVCARGLDVKNLILVVNYDCPNHYE
DYVHRVGRTGRAGIKGYSWTFITPEQDWYSGDIMRALELSDALVPQELRDLFKVYKDRME
SEGKKVRTGGGFGGTGFKFDESEAQYTTEKKKFQKAALGLQDSDDEDVEQEIDAQIEQLL
SAKRTVRNIDATAAANLIGPGAKKPGEGGSAQASDKLELAKKLASKIKIKDPRDNTQQAT
EDFLNKGEGGNKISAKSVADHLAAKLNAKLNYIPSDDNLKPEEGGVFQKFEEELEINDFP
QQARWKVTSKEALAQIAEYSEAGLTVRGTYYAPGKSPPEGERKLFLAIESTSELAVQKAK
VEITRLLKEELMRLSASSIQHINKGRYQVL
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggaaaagcggagaagatccagttcttccagcccggctaaaaaacgtgacaaa
tcccgagagcgtaaaagatcaaagtcccgagatagaaagaaggaaaagaaggagaagaaa
gagaaaaaggagagaagcagaagtagagagagacgaagatcaagagacagaaaaaagtcc
cgacgatcccgatctcgtgagacgaagtcccgagggcgggatagtcaagagatcgacgat
aaggcgtattcatcacacaacaagttggataaggacagtgagcaggccaggcttgagaat
gagatgcagagaaggagagaaagaatagaaaagtggagagcggagaaaaaaaagggaaag
gaacctgcagttgtggaagtgaaagctgaagaagaaccagaaaaggtgaagaagtggagt
ttagaagatgaggattcagaggaggaagaaactgttgttaaaaaggaagaggaaatcgtg
gataagaaaccggaagtgaaggaagaggatgatgtggatccgcttgatgcgtttatgact
gatatcagtaaggaggttcggaagatgaagggagccatgtttaagaatgctaagggggtt
gtcactaagagtaaaaaagagatgaagactgaggagaacggagatgctgagaagaagaag
gggatggtgatcatgatgggggtagcaaagaagaaaccagatactgtcagcaaaaaacca
gaggtgatggaacaaaatgaagatgctcttgagtatagtagtgaagacgagaaaaaagac
aatctagaggataatctgaacaaactaaaagagaaaggaaagaaggttgtggctaaggtt
gaccatggtggagtagaatatccagcatttaggaaggatttctatattgaggtacctgaa
ttggcgaagatgaccgacctagaagttgaagactacagagctgagctggaagggattaaa
gtgaaggggaagaatgttcctaaaccaatcaagaactggccacagtgcggagtcagttca
aagattcttcagctgcttaaaaaacatggatatgagaaaccaactccaattcaggcgcag
gccattccagtctgtatgagtggaagagatatgatagggattgctaaaacaggaagtgga
aaaacattagccttccttcttccacttttcagacatatagcagaccaggaggaattggag
gagggggacggacccattgcaatcatcatgacaccaaccagagaactttgtcttcaaata
ggtaaagaatgtcgtaagtttgctaaatctgtgaatgcccgagctgtatgcgtctacgga
gggacaggaatctcagaacagattgcagaacttaaacgaggggctgaaattattgtttgt
actcctggtagaatgattgatatgttagcggctaactcgggcaaggtgacgaacttgaag
aggattacctacctggttctggacgaagcagacaggatgttcgacatggggttcgaacca
caggtgatgcgtgtattggataactgtagaccagatagacaaactgttcttttctcagca
acctttcccagacagatggaggggttagctagacggattttgaaatctcctgtagaggtt
caggttggaggaagaagtgtggtagcaaaggaggttgagcaacacgtggcggtgttggag
gaggacactaagttcttgaagttgctggaggtgctcggggagtatagtgatcaggggtcc
atcatcatattcgtagacaagcaggaacatgcagacggtctgcttaaggtagttattata
ttagtagacttaaatggagaaaccacaattggaattaatcaaatcaacagagattctaca
atctcgaattttaaacaggggcgcgtgcagatcctggtcgctacgagcgtgtgcgcgcgc
ggcctcgacgtgaagaacctaatcctggtggttaactacgactgcccgaaccattacgag
gattacgtgcacagggttggaaggaccggcagggccggtattaaaggctacagttggaca
tttatcaccccagaacaagattggtatagcggggacataatgagagctttagaactttca
gacgcattagtaccacaggagttgagagatttgtttaaagtgtacaaagatagaatggaa
agtgaagggaaaaaggtacgaacaggaggtgggtttggtggaactgggtttaagtttgac
gaatctgaagcacagtacacaacagagaaaaagaagtttcagaaagctgctcttggtctt
caggattctgatgatgaggatgtagagcaggaaatagatgctcagatagaacagctcctc
tccgctaagagaacagtcagaaatattgatgctacggcagcagctaatcttattggacct
ggagctaagaagcctggagagggtggaagtgcccaagcatctgataaacttgagttggcc
aagaagcttgccagtaaaatcaaaataaaggaccccagagacaatacacaacaggcaact
gaggatttcttgaacaagggcgagggaggaaataagatatctgctaagtctgtagcggat
catcttgccgctaaactaaatgctaagttaaattatattccttctgatgataacctgaaa
ccagaagagggaggtgttttccagaagtttgaggaggaactggagatcaatgatttccca
cagcaagccagatggaaggtgacgagtaaggaagctctggctcagatagctgaatactca
gaagctggtctcacagtcagaggtacctactatgctcctggaaagtctccgcctgaagga
gagcgaaaactcttcttggcgatagagtcaacctcggagctcgcggtgcagaaggcgaag
gtggagatcacacgacttctcaaggaggagttaatgagattatccgccagctctatccaa
catatcaacaagggtagataccaggttctatag
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