Eurytemora affinis: 111707807
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Entry
111707807 CDS
T07296
Name
(RefSeq) probable ATP-dependent RNA helicase DDX60
KO
K20103
ATP-dependent RNA helicase DDX60 [EC:
5.6.2.7
]
Organism
eaf
Eurytemora affinis
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eaf03019
]
111707807
Enzymes [BR:
eaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111707807
Messenger RNA biogenesis [BR:
eaf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
111707807
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
Peptidase_U57
AAA_22
Init_tRNA_PT
Motif
Other DBs
NCBI-GeneID:
111707807
NCBI-ProteinID:
XP_023336734
LinkDB
All DBs
Position
Unknown
AA seq
1298 aa
AA seq
DB search
MYSRFMQRYGESLEGSNIKDDPIICKKVDKKKEKEAKTSGSAIELLRKKLVSDVKSGYSK
LEERVKMCRKEGVKEQEDVLQELKIKLSNLQAQLSSLQGKAGQKQNKKVLADIEKDDNEL
KASFTPLIQKLVYSILKLRYKAWKENPSDATKIKMLLHIKNNINVIKEFKPELMEDVVKY
TKEIDCEELGAGLASQAVENDSGPGSKKAVKASTCSKQDKINKSKAEPQSEKGTGNFIRY
QLKKMEKYITKTAPNESDPRVNFNPDLWQRDIFDAIDARESALIIAPTSSGKTYAAYYAM
ESVLRESDDGVAVFVAPTKALVNQVAATVCARFSKRKQNLPPGKSVYGTFTRDYRFNTTD
CQILITVPECLEILLLCPIQFQWTKKLRYVIVDEIHNIGGESRGEVWENILSLIRCPVIA
LSATVQNPKDLLNWLQTLENYKEEMDRASGRGEMRRSYKVRMIPESGKIERHSDLVKYKY
YSDEDGTDGITYVHPISYLNAQELLNKGSFPECMTFSPSECLDLFDVMADKFGVDAVQNV
DPLMLFPRNRFLDRADIQIFNSSISSFILKLENSQANMEKLNEVITHFPGLTKDQAGIYD
ERNYLIDYFPALVKTLQKKNMLPALVFTFDRGYCVRLPAEVSDTFEEEIEEIKNTQEYQK
KQANKEKIEKAMKKIIKKKKNEAAESEKTRKNVNAVSLAITSVDDISPYEKLMSLYQEFP
LQTLVGPNNLDRDSMFNIMSNLKLVKKEYMELMKYGMSYHHAGNNSKMRSTTEMLFREKF
LNLVVCTTTLAQGIHMPCQTVVFAGDSVFLNSLNYHQCSGRAGRRGFDQQGNVIFFGIRE
SKIARLMNSNLPLISGNSPTSISKILRLFLLTSDTQSPEDRKDAIAKALGSLNNPLLVLR
NESIITQLQIFFLFAVEFLLAQDYLDEAGHARGFSGIVTHLSFHEPYNFAFCHLLQEGVL
HSLITRNSKQEITEKSLRTLVLVLNYMFGMVPAPSKKEALPPLPADIQASVDNYNKSIYS
IYHEFLHTAANLFYKPHYKSVLPLSGLKHDCPDTGFVDPLAELAGVTSISDDTIDTLSSN
LRRELVTEALPKLEKLPINGYALEFFISGDKTVVQQKFRVNDTFFHLNSFMLVLMTIKTS
LQEIGPDSSQDTTDDLIDAFTEISNRFTKKFNKAFGIEKETRSWGCHKIHEINCYTCSLM
VEGRIVEHSGRKWSVKGRLDCKSEQCVIFIKCHTCRIGYITTCLMSVAAKIDSLRTTSTH
FKEHEVSLMVISRMRKGEDLNTARIQWMQKLRVHNEIK
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atgtactccagatttatgcaaagatatggggagtcccttgaaggatcaaacatcaaggac
gatcctattatttgtaagaaagtggataagaaaaaagaaaaggaggccaagacaagtgga
agcgccattgaactactgagaaaaaagctggtgagtgatgtgaagagcgggtacagtaag
ttggaggagagggtgaagatgtgcaggaaggaaggtgttaaagaacaagaagatgttctt
caagagcttaagattaaactctcaaaccttcaggcccaactctcctctttgcaaggcaag
gcagggcagaaacaaaacaagaaggttttggctgacattgaaaaggatgataatgagtta
aaggcaagttttactcctcttattcagaagctagtttacagtatacttaagctcaggtac
aaagcatggaaggaaaacccctctgatgccaccaagatcaagatgctgcttcatataaag
aataacatcaatgttatcaaagagttcaaacctgaactcatggaggatgttgtcaagtat
actaaggagatagattgtgaagagttgggtgcaggattagcttctcaagctgttgaaaac
gattctggaccaggttccaagaaagctgttaaagcttccacctgcagtaagcaagacaag
atcaataagagtaaggctgaaccacaatcagaaaagggaacaggaaatttcatcagatat
caactaaagaaaatggagaagtacattactaagactgccccaaatgaatctgatcccaga
gtgaactttaaccctgacttatggcagagggacatctttgatgcaattgatgctagggag
tcagcccttataattgctcctacctcctctggtaagacctatgctgcatattatgctatg
gaaagcgtgctcagggaaagtgatgatggggtggctgtctttgttgctcctactaaagcc
ctagttaatcaagttgccgcaacagtgtgtgcacgtttcagcaaaaggaaacagaacttg
cctcctgggaaaagtgtttacggtactttcactcgagattacaggtttaacacaacagac
tgtcagattctgattactgtaccagagtgtttggaaatccttctcttgtgtcccatacag
tttcagtggaccaagaagctcagatatgttatcgttgatgagattcataatattggtgga
gagtcccgaggagaggtttgggagaacattctaagtctgatcagatgtcctgtaattgca
ctctccgctactgtgcagaacccaaaggatctgctaaattggttgcagactctagagaac
tataaggaagagatggatagagctagtggcaggggggagatgagaaggtcttacaaggtc
aggatgattccagagagtggtaagatagaacgtcactcagatcttgtgaaatacaagtat
tacagtgatgaggatggaactgatggaatcacttatgtacaccctatctcctacctcaat
gctcaagaattattgaataaaggaagttttccagagtgcatgacattctctccatctgaa
tgtctagacttgtttgatgtaatggctgacaagtttggggttgatgctgtccaaaatgtg
gatcctctcatgctatttccgagaaacaggttcctggatagagcagatattcagatattt
aattcttcaatcagttcattcattttgaagcttgagaatagccaggcaaacatggagaag
ctgaatgaagttatcactcactttcctggactcactaaggatcaagccgggatttatgat
gaaagaaactatcttattgattacttccctgcactagtgaaaacgcttcagaagaaaaat
atgctgcctgctctagtcttcacatttgatagaggatactgtgtccgtcttcctgcagaa
gttagtgatacatttgaggaagaaatagaggaaattaagaatacacaagaatatcagaag
aaacaggcaaataaagagaagattgagaaggcaatgaagaaaatcataaagaagaagaaa
aatgaggctgcagagtcggagaaaacgaggaaaaatgtaaatgcagtttcccttgcaatt
accagtgtagatgatatctctccctacgagaagctaatgagtctttatcaagagttccct
ctgcaaacacttgtcggaccaaacaaccttgatagggactccatgttcaatattatgtcc
aacctgaagctagttaaaaaagagtacatggagttaatgaaatatggtatgtcataccac
catgcgggtaataatagcaagatgagatcaacaactgagatgttgttcagagagaagttt
ctaaatctagttgtttgcaccactacccttgcccaaggcatacatatgccatgtcaaact
gttgtatttgctggggattctgtttttttaaacagcttgaactaccatcaatgttctggc
agggcaggcaggagaggatttgatcaacagggaaatgtgattttctttggaatccgagaa
tctaagatagcaagactgatgaacagcaatttacctcttatatcagggaacagtcccacc
tccatctcaaagattctgaggttgttcttactaacaagtgatacccagtctccagaagac
agaaaagatgccatagccaaagctttgggaagcttgaataatccacttctagttctaagg
aacgagagcattattactcagctgcagattttcttcctgtttgcggtagaatttctcctg
gcgcaggactacttagatgaagccggacatgctcgtggtttttcagggattgtaactcat
ctctccttccatgaaccttacaactttgcgttctgccatttactacaggagggtgttctg
cacagtttaatcaccaggaacagtaagcaggagatcacagagaaatctctgcgaactctt
gtcctagttctcaactatatgtttgggatggttccagctcctagcaaaaaagaagcctta
cctccccttccagcagacatacaagcatctgtagataactacaacaagtccatttattcg
atttatcacgaatttctgcatacagctgcaaatcttttctacaaacctcactacaaatct
gtgctaccattgtctggtctgaaacatgattgccctgacacaggttttgttgacccacta
gcagaattggctggtgtgaccagtatatcagatgatactattgatacactctcgtcaaat
ctgaggagggagttggtcactgaagctttgcccaaacttgagaaacttcccatcaatgga
tatgcactggaattttttatcagcggagataagactgtggtccagcagaagtttagagtc
aatgatactttcttccatcttaatagcttcatgttggtactgatgactatcaaaacatcg
ttgcaggagattgggcctgacagttctcaggacactacagatgacctgattgatgctttc
acagagatatcaaaccggtttacaaagaagtttaacaaagcatttggaatcgagaaggag
acccgcagctggggttgtcacaagattcatgaaataaactgctacacctgtagtttaatg
gttgaaggaagaatagtagaacattcagggcggaaatggtctgtaaagggtcgtctggat
tgcaagagtgaacagtgcgtcatcttcattaaatgtcacacatgcagaattggttacatc
accacctgtctgatgagtgttgctgcaaagatagattcattgaggacgacatccacccat
ttcaaagagcacgaggtgtctctgatggttatatcaagaatgaggaaaggagaagattta
aacactgccaggattcaatggatgcagaagctacgtgttcataatgagataaaatag
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integrated database retrieval system
