Eurytemora affinis: 111710866
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Entry
111710866 CDS
T07296
Name
(RefSeq) DNA ligase 4-like
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
eaf
Eurytemora affinis
Pathway
eaf03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
111710866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eaf03400
]
111710866
Enzymes [BR:
eaf01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
111710866
DNA repair and recombination proteins [BR:
eaf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
111710866
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
BRCT
BRCT_2
DNA_ligase_IV
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
111710866
NCBI-ProteinID:
XP_023340808
LinkDB
All DBs
Position
Unknown
AA seq
910 aa
AA seq
DB search
MDWSSNLTFKELTDFLQRLVKADKSARFRHVQRFLQHCRHLADKIQNPAETKNSLFPVLR
LLVPQLDKERGAYKMKETALAGMYIEFLQLGKNSADALKLKNYKVPTAVQDDAGDFASVL
YTVMQQRCYKSTDISCSEINQKLDQIVRLNNNEGRREVAGVFKDLFLRMDALQQKWLIRI
ILKEMKISMGNNSVLSALHRDAKELYEVNSNLRKVCELLHDPEVRMNEIQIQIFSPFKPQ
LADRVAISKLNLIIKGKECYIETKYDGERMQAHMEDGRFKFFSRNGSDFTDEFGHSASDK
DKFSSFLASSLCPEVKSVILDGEICAWNHQTQTIIQKSQQNNIRNIKTDHRNLQQCLVIY
DICYLNGQVLTNTPFSERIKIYERIVRPMPGRIQLSHRMIVRSKSEVIEALNDAIDNREE
GLVLKDPLSTYKPNARSGSGWIKLKPDYENQLMDQIDLLVLGGYFGSGKGGGKITHFLMG
LSDRSGDTEKFVTFCRVSSGFSAADIEDMVGRCGKQLKTPTSNINCGRDKPNVWFDPRSS
PVLQVNAAEITRSESYSAGCTLRFPRVERLREDKDYSNCTTLQEIIKLREMGDGKLCNGV
RLIDSEVETPRKRIKISSKPTLGSEYKHIDYSNERIETFHLKDKIIVVEPSNDVELKHKL
ERIVVKHGGRVEQNFKAGRTFCFIQTAGTVKAKNIIGEGSVDVVKSSWILDCETTFRMFG
PHDTVFATEKTKSKWKTEYDEFGDSYHDLATVQSLTLSMDAVAKKGSTDSLDLEELESYL
QDFKYFLFRGLRLYLEYGEKEEDKRTLDTALVRFYGASVVHGNSILEQDESSQEQDESGL
EKGSPEQVLGNVSHVVFFNPAPDIIHKYKRIRRDINAGTERLFHLVISDWISESISAGRL
LPEKDFYPEP
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggattggtcgtctaatctcacatttaaagagttaacggattttctgcaacgacttgtt
aaagccgacaaatccgcaagatttcgacatgttcaaagatttcttcaacattgtcgacac
cttgctgacaaaattcagaacccagctgagacaaagaactctctgtttcctgttttaaga
ttattagtccctcagctggataaagagagaggagcgtataagatgaaggagacagctcta
gctgggatgtatattgagttcctacagctaggaaagaattctgcagatgctcttaaactg
aagaattataaagttcctacagctgtacaggatgatgctggagatttcgcgtctgtcctc
tacactgtgatgcagcagcgctgctataaatctacagatatatcctgctcagagatcaat
cagaagctagatcagattgtcagactgaacaataacgagggtcggagggaggtggcggga
gtattcaaagacttgtttcttcggatggacgccttgcagcagaagtggttgatcaggatt
atactcaaggagatgaagatctccatggggaacaactcagtactctcagctctacatagg
gatgcaaaggagttgtacgaagtaaattcaaatcttagaaaggtttgtgaactccttcat
gatcctgaggttcggatgaacgagattcagattcaaatattttctcccttcaaacctcag
ttagcagatagggttgctatatctaaacttaatctcataataaagggcaaggaatgttac
atcgagacaaagtatgacggagaacgaatgcaggcccacatggaggacggcaggttcaag
ttcttctccaggaacggatccgacttcacggacgagtttggacattcagcttcggataag
gataagttctcatccttcctagcatctagtctatgcccggaggtcaagtctgttatcctt
gacggagaaatatgtgcctggaatcatcaaactcaaactattatccagaaaagtcaacaa
aataatattcgaaatattaaaaccgatcatcgaaacttacaacaatgtctcgttatctac
gatatctgctatttaaacggtcaggttttaacgaacaccccgttttctgaacggataaaa
atatacgaaagaattgttcgtccaatgccaggacgaattcaactctcgcatcgaatgatc
gtaagatcaaaatctgaagttatcgaagctctaaacgatgcaattgataaccgcgaggaa
ggtttagttctaaaagatcctctgagtacatataaacctaacgccaggtctggaagtggg
tggattaaactaaaacctgattatgaaaaccaactcatggatcaaatagaccttctagtt
cttggtggatatttcgggtccgggaagggtggaggaaaaataactcattttctcatgggt
ttatcggatagatcaggggacaccgagaaatttgtcactttctgtcgggtctcatccggg
ttttctgcggcagacattgaagatatggtcggcagatgtgggaaacaattgaaaactccg
actagcaatataaactgtggaagagataaaccaaatgtatggtttgatcccagatcctct
ccagtccttcaagtgaatgctgccgagattacaagatcggagtcctacagtgcaggttgt
accctccggtttcctagggtggaacgcttaagagaagataaggattactctaactgtaca
actctacaggagataatcaaacttagagaaatgggggacgggaaactttgcaacggagta
cgtctgattgattctgaagtagaaactcccaggaaacggataaaaatctcctcaaaacca
acccttggctccgagtataaacatatcgactacagcaacgagaggattgagacgtttcat
ctcaaggataagattatagttgtggagccgagtaatgatgttgaactgaagcataagttg
gagaggattgttgtgaagcatggaggtagggtggagcaaaacttcaaggcaggacgaact
ttctgctttatccagactgctggaacagttaaagcaaagaatattattggtgagggttca
gttgatgttgttaaatcctcctggattctagactgtgaaaccacattcaggatgttcgga
ccccatgatactgtatttgcaacagagaaaactaaatctaagtggaagaccgagtacgac
gagtttggggattcttatcatgatctcgccaccgtgcaatctttaacccttagcatggac
gctgtcgctaaaaaaggttcaacggactccttggatcttgaagagcttgagtcatatctc
caggactttaaatattttttgttccgagggttgagactatacctcgagtacggagagaag
gaggaggataagagaaccttggatacagctctagtcaggttctacggagctagcgtagtg
catgggaattctatcctggagcaggatgagtctagccaggagcaggatgagtccggcctg
gagaagggcagtccggagcaggttttaggaaacgttagtcatgtagttttcttcaatcct
gcaccagacatcattcacaaatacaagagaattcgtcgtgatattaacgctggaacagaa
agattattccacttagtaatttcggattggatttctgaatctatatccgctggaaggtta
ctcccggagaaggacttttatcctgaaccttaa
DBGET
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