Candidatus Ecksteinia adelgidicola: F7X37_00159
Help
Entry
F7X37_00159 CDS
T08924
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
eag
Candidatus Ecksteinia adelgidicola
Pathway
eag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F7X37_00159 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eag03019
]
F7X37_00159 (pnp)
03016 Transfer RNA biogenesis [BR:
eag03016
]
F7X37_00159 (pnp)
Enzymes [BR:
eag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
F7X37_00159 (pnp)
Messenger RNA biogenesis [BR:
eag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
F7X37_00159 (pnp)
Transfer RNA biogenesis [BR:
eag03016
]
Prokaryotic type
tRNA degradation factors
F7X37_00159 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
S1_2
Motif
Other DBs
NCBI-ProteinID:
UDG79209
LinkDB
All DBs
Position
complement(318642..320759)
Genome browser
AA seq
705 aa
AA seq
DB search
MLIPIIRTFQYGQHSLTIETGIMARQATSAVMVSMNDTSVFVTVVGEKKAKTNQNFFPLT
VNYQERTYAIGRIPGSFFRREGRPNESEILTSRLIDRPIRPLFPENFLNEVQIIATVLSL
NPQINPDILAIIGASAALSLSGMPFHGPIGAARIGYINNKYILNPTIEELKVSRLDLVVS
GTSSAVLMVESESNILSENQILDAIEFGHKQQQIVIKNINSLSSEAGKSKWDYKDPEINS
LLFSKINKIVKSSFENAYQIIDKEKRCTQINIIKDSVLTTLLLQDETLNVIEIQKIVDSI
EKKILRNRILDGKARIDGREKDMIRSIDIRTGILSRTHGSALFTRGETQALVTATLGTSR
DAQNLDELIGDKTDTFLFHYNFPPYAVGEIGIVGSPKRREIGHGRLSKRGILPMMPKIED
FPYTIRIVSEITESNGSSSMASICGASLALMDAGVPIKAAVAGIAMGLVKEKNNFVVLSD
ILGDEDHLGDMDFKVAGSRNGITALQMDIKIEGITREIIQIALNQAKSARIHILNIMEQA
LNKPRNDISQFAPRIKIIRINPDKIKDIIGKGGSVIRTLTEETDTTIEINDDGTIKIAAT
DSEKAKHAIHRIIEITSEIEVGRIYQGKVTRIVDFGAFFSIGGGKEGLVHISQISNQRVE
KVADYLRMGQEIPVKVLEVDRHGRVRLSIKEIATSTMNLRTSKKN
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
ttgctgataccaattattcgtacgtttcagtatggccagcactcccttaccattgaaact
ggtataatggcgcgtcaagctacttctgcagttatggttagcatgaatgatacttctgta
tttgttactgttgttggagaaaaaaaagctaaaacaaatcaaaattttttccctctgaca
gttaattatcaagaacgaacttatgctattggccgcatacctggtagtttttttcgccgt
gaaggtcgaccaaacgaaagtgaaatactaacttctcgccttattgatcgtccaattcga
cctcttttcccagagaattttctaaacgaagtgcaaatcattgctaccgtattatcttta
aatcctcaaattaatccagatattcttgcgataattggagcgtctgctgctttaagttta
tctggaatgccatttcatggtccaatcggcgcagctcgaatcggttatattaataataaa
tatatacttaatccgacaatcgaagagctaaaagttagtagattagacttagtagtttct
ggtacttctagtgcagtattaatggttgaatctgaatcaaacatactaagtgaaaatcaa
attttagatgcaatagaatttggtcataaacaacagcaaattgtgataaaaaacattaat
tctttatcatctgaagctggtaaatcaaaatgggattataaagatcctgaaataaattct
ttactattttctaaaattaataaaatagtgaaatcaagttttgaaaatgcatatcaaatt
atagacaaagaaaaacgttgcacgcaaataaacataattaaagatagtgttcttactact
ttattgttgcaagatgaaacacttaatgtcatagaaattcaaaaaatagtagatagtatt
gagaaaaaaattttacgtaatcgtatattagatggaaaagcacgtatagatggtcgtgaa
aaagatatgattcgtagcatagatatacgtactggaatattatctcgaactcatggatct
gcattatttactcgtggcgaaactcaagcattagttactgcaacattaggtacttctcgc
gacgcacaaaatttagatgaactaataggtgataaaaccgatacatttttattccattat
aactttccaccttatgctgttggagaaattggtatagttggatctcctaaacgccgtgaa
attggacatggtcgtttatcaaagcgcggaatattacctatgatgcctaaaatagaagat
tttccatatacaatacgtatagtttctgaaattactgaatctaatggttcttcttctatg
gcttcaatttgtggagcttctttagcgttaatggatgctggtgtacctattaaagctgct
gttgcaggcatcgctatgggtttggtaaaagaaaaaaataattttgtagttctatcagat
attttaggtgatgaagatcatttaggtgatatggatttcaaagtagctggtagccgaaat
ggtattactgcattacaaatggatataaaaatagaaggtataacacgagaaattatacaa
atagcattaaatcaagctaaaagtgctcggatacacattctaaatattatggaacaagct
cttaataaaccacgtaatgatatttctcaatttgcaccacgtattaaaattatccgtatt
aatccagataaaattaaagatattattggaaaaggtggatcagtaattcgaactcttacc
gaagagactgatactacaattgaaattaatgatgatggtacaattaaaattgctgctact
gatagtgaaaaagcaaaacatgctattcatcgaattattgaaattacttcagaaattgaa
gttggtcgtatttatcaaggcaaagttactcgtattgttgattttggtgcttttttttct
atcggaggaggaaaagaaggtttagttcatatttctcaaatttctaatcaacgtgttgaa
aaagttgctgattatttacgcatgggacaagaaatacctgttaaagttctagaagtagat
cgacatgggcgtgttcgtcttagtattaaagaaattgcaacttcaacgatgaatttaaga
acttcaaaaaaaaattaa
DBGET
integrated database retrieval system
