Ensifer adhaerens Casida A: FA04_24820
Help
Entry
FA04_24820 CDS
T04507
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
eah
Ensifer adhaerens Casida A
Pathway
eah02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
eah00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FA04_24820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
He_PIG
fn3
Big_9
Autotransporter
Cadherin_5
Pur_ac_phosph_N
CshA_repeat
Motif
Other DBs
NCBI-ProteinID:
ANK75882
LinkDB
All DBs
Position
pCasidaAA:complement(1134035..1140232)
Genome browser
AA seq
2065 aa
AA seq
DB search
MKDDDATPVTFNVTVVPVSSPLTVTPVSLPAPAISSAYSQTIATTGGVSPYTYARVGGTL
PPGLTLSSAGVLSGTPTGSGPYNFTVRVTDSTAPTPITFDKSYGVTIAAPVIDVTPDNPP
DGGVGVPYSVQFTANGGTPGYTYTRDTGTLPSGLNLSSSGLLSGTPTAAGSFTFKLKVQD
STTISTGGVHFLAQDVTVIVNSFPPVTISPASGALPAATVGSAYSQGISASGGAGAISYA
VTAGSLPAGLALNTTTGAITGTPTAAAIGTANFTVTATAATSGSAIANYSIAVSAPPVVL
TPANNTALSGGTVGVAYSNTSISATGGVGAITYSVSAGALPPGLTINPSTGAITGTPLPS
AYGSTPFTVTATAATVGTDSKAYSITIAAPPVVLTPAGGALAGGDVNVVYPGASISASGG
LGTFTYTVTAGALPDGLSLSSAGAIVGTPTAAGYGTKNFTITATGSTAGSASAAYSIAIS
APPMTLTPAGGALTAATAGTAYSDTSIAAVNGLGTVSYSVVPGTLPPGLGLASASGAISG
TPTVGGAFSFTITATDMHSRTASESYSINVTAIAPDAPTGAAATANDASARVSFSAPAFN
GGSSITGYIVTASPGGVTATGPSSPIDVTGLTNGMRYTFTVAATNVAGTGVASGASNAVT
PKAPQTITFANPGSQSFGTTPTLTATASSSLPVSFTSATAGVCTIDPGGELAFQSMGTCT
IHADQAGDAATEAAPRVSQSFIVNAVAPAAPTGVVATAGDSQAMVAFVAPSSNGGALISR
YVVTSSPDGLTGDGTSSPVVITGLTNGTSYTFTVVAENNAGPGPASTASNAVTPRTIQTI
TFANPGAQSFGTTPTLTASADSGLTVSFTSSTTAVCTISPAGLLSFVSIGTCTINADQPG
DGTYLPATQVSRSFVVNAIAPGAPTGVVATAGNASAEVSFAAPANTGGAPITGYTVTASP
GGLTETGPASPLTVAGLTNGTGYTFTVTAANSTGTGLASGASNSVTPKGPQTIIFSNPGP
QNYTTPVNLIASASSGLPVAWQSMTPSVCVVTSSGAATFRNGGTCTIEVSQAGDGAYLAA
PSVSQSFAVSAPIFAFSPAAGSLPVATVATAYSVSFTATDGTSPYSFAIASGALPGGLSL
ASSGVLSGTPNEDGTFAFTIAATDAYGATGTSGSYSLIVRVQAPIAGATTKTVAANSTAN
VIAPNLSGGAAASVTVTTAPSHGTATVAGTSFNYTPAAGFSGTDTFSYTATNATGTSAPA
TVTVTVSPPIFAFTPLPGPLPGATVAQPYDQTISATSGTGPYSYAITGSQPPGLTLAANG
RLSGTPTVDGNFNFTIEATDANSATGSVTYSLAVAVEAPSAGAVALTVAANSAANVISPS
ISGGAAASLAIASPPSRGNASVSGLQILYTPQPGYSGADSFTYTATNATGTSTPATVTVT
VSPPVLVLSPTGGTLAAAVAGVSYSQSLTASAGTAPYLYQVTSGALPGGLTLDPVSGAIS
GRPGADSDFAFTVTATDANGATGQASYRIAVVSANIVFSPAAGSLPDAMVGEAYSAPISA
SGGTGALIYSVKSGTLPKGMVLNVSTGELTGPLAADAVPDTYRFTIGVVDSRGASGSAAY
TLKLNPRAVTAPSIVVDVPAGTTPNNIYLNAGATGGPFTSAAVASVSPPIAGTAEIIEGE
LAAAGSFTPVGYYLKFTPNPSYSGSAVVSYTLRSALGTSGAGTVTYKIALDRVAAGEEID
GLVRDFVRNRQSLLSSTVKVPGLIERRRAAMSTDPVTTAVTPSENGARLGFSTSLTQIQA
ARDAADAAAAGQTFVKTDQPFDVWMDGSFLFHKDKDDDSDKWGNFALFSIGADYLISERA
LVGLSFHYDYTSDPTDEDAELTGNGWLAGPYASFEIGQGVFLDANLLYGGSSNDIDTGIF
TGTFDTTRWMADVKLTGEWQLDEITVLTPKLRAVYFNEEVDDYTARNALGETIDLKGFIE
EQARFSIGLDVERTLELENGLILSPTVGADVGFASLDGEGLFGRVSAGLALSNNDNWGLD
FSLLFNIEGDGSQAAGAKVGARVRF
NT seq
6198 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagacgacgacgccacgccggttacgttcaacgtgaccgttgtgccggtgagttct
cccttgacggttacccccgtttccctgcctgcacccgccatcagcagcgcctacagtcag
acgatcgccacgacgggcggggtgtcaccttacacctacgcccgtgtcggcggcacgttg
cctccggggctgacgctctcttcggccggtgtgctttccggaacgccgaccggttcgggc
ccgtacaatttcacagtgcgtgtaacggattcgaccgcgccgacaccgatcaccttcgac
aagagctatggtgtgacaatcgcggcgcccgtgatcgacgtgacgccggacaatccgcca
gatggtggggttggcgtaccatatagcgtccagtttacagcgaacggtggcacgccggga
tatacctacacacgcgacaccggcacgctgccgagcggcttgaacctttcgtcaagcggc
cttttgtccggcacgccgacagcggcaggaagtttcaccttcaagctgaaagtccaggac
agcacgacgatctcgaccggtggcgtccatttcctggcgcaggatgtaacagtcatcgtc
aactcctttccaccggtgacgatcagcccggcgagcggcgcgcttcctgccgcaacggtt
ggcagcgcctattcgcaagggatctcggcaagcgggggggcaggggcaatcagttacgcg
gtgaccgcaggttcgcttccagcaggtctcgccttgaacacgacgacgggtgcaattacc
gggacgccgaccgctgcggcgatcgggactgcgaactttaccgtcacggcgacggccgcg
acctccggctcggccatcgcgaactactccattgccgtcagtgcgccgcccgtggtgctt
acgccggcaaacaacaccgccttgtcaggtggaacggtgggcgttgcgtattcgaacacg
tcgatttccgcgacgggcggggtcggcgcgatcacctattcggtgtcggcgggcgccttg
ccgccgggtctcaccatcaatccctcgacgggcgcgatcaccggcacgccgcttcctagc
gcctatggttccacgcctttcacggtgacggccacggctgcgaccgtcgggaccgattcc
aaggcctattcgatcaccatcgcggccccaccggtggtgctgacgccggcgggtggggcc
cttgccgggggcgacgtgaacgtcgtctacccgggtgcgtcgatctctgctagcggcgga
ttggggacgttcacctatacggtgacggcgggcgcgcttccagacggcctcagtctgagt
tcggctggggcgattgtcggtacgccgacggcggccggatacggcaccaaaaatttcacg
atcacagcgacaggctcgaccgccggttcggcgtcagccgcctacagcatcgcgatttcc
gcgccaccgatgacgctcacgcccgcaggcggcgcgttgacggccgcgactgcagggacg
gcctattccgacacgtcgattgccgccgtaaacgggttgggaacggtcagctactccgtc
gtccccggcacacttccgcccggtctcggccttgcgtctgcaagcggcgcaatcagcggg
acgccaacggttgggggagccttcagcttcaccatcacggccaccgacatgcatagccgg
acggccagcgaaagttacagcatcaatgttacagcaatcgctcctgatgctccgactggg
gctgcggctacggccaatgatgctagcgcacgtgtgagtttctccgcgcctgcctttaac
ggcggcagctcgattacaggctacatagttacagcgagcccgggaggcgttaccgcgacg
ggaccgtcaagcccgatcgacgtcactggcttgaccaacggcatgaggtatacgtttacg
gtcgcagcaaccaacgttgccgggacgggtgtcgcttccggtgcttccaacgccgtgacg
ccgaaagcgccgcagacgatcacgtttgccaaccccggttcccaatcttttggtacgacg
cctaccttgacggcaacggcgagttccagcttgcccgtcagcttcacctccgcgacggca
ggtgtgtgcacaatcgatcctggcggtgaattggcgttccaatcgatggggacatgcacc
attcacgcagaccaagccggtgacgccgccactgaggctgcgccacgggtaagccagagc
ttcatagtgaatgcggttgctccggccgcgccgacgggagttgttgcgacggctggcgac
agccaggcgatggttgcctttgttgcgccctcaagcaacggcggggcgctgatctcgcgc
tacgtcgtcacctcaagcccggacggtttgacgggagacggcacctccagtccggtggtc
atcacggggctgacgaacggcacgagctatacgttcacggtggtcgctgaaaacaacgcc
ggtcctggccctgcgtcgaccgcctccaacgcggtgacgccgcgcacgatccagacgatc
acctttgccaacccgggtgcccagagcttcggcaccacgccgaccctgacggcgagtgcg
gactccggcctgacggtgagcttcacatcgtcgacgacggcggtctgcacgatcagtccc
gctggacttctgtccttcgtatcgatcggcacctgtaccatcaacgccgaccagcccggc
gacggcacctatctgccggcaacgcaggttagccgatcgttcgtggtcaacgcgattgcg
ccgggcgcgccgaccggcgttgtagccacggccggcaacgcctcggccgaggtctccttt
gccgcgccggccaatactggtggtgcgccgatcaccggctacaccgttacagccagcccc
ggcggcctgaccgagacgggccccgcgagtccgctcacggtggccggcctgacgaatggc
accggctacacgttcacggtgacggctgccaacagcactggtacggggctcgcgtccggc
gcctccaattctgtcaccccgaaggggccgcaaacgatcatcttttccaatcccggacct
cagaactatacgacgccggtgaacctgatcgcgagcgccagttccgggctccctgtggcc
tggcaatccatgacgcccagcgtctgcgtcgtcacttcaagcggtgcagcaaccttccgc
aacggcggcacctgcaccatcgaggtctcacaggccggcgacggcgcctatctggcggca
cccagtgtcagccagtcgttcgcggtctcggcgccgatctttgccttttcaccggctgcg
ggctcattgccggttgcaaccgtggcgaccgcctatagcgtgagcttcacggccacggat
ggcacatcgccctatagcttcgcgatcgcgagtggcgccttgccgggcgggctttcgctc
gcgtcgtcgggcgttctttcgggcacgccgaacgaggacggtaccttcgccttcacgatc
gcggccaccgatgcctatggtgcgaccgggaccagcggcagctacagcctgattgttcgg
gtgcaagcgccgattgccggagcaacgacgaagacggttgccgccaactcgacggcgaat
gtcattgcgcccaatctttccggtggcgctgcggcttccgtaaccgtcactaccgcgcca
tcacacggcactgccacggtggctggaacgtcgttcaactatacgcccgccgcgggtttc
tccggtactgacaccttcagctacaccgcaacgaacgcgaccgggacatcggcgccggcg
acggtcacggtgacggtgtctccaccgatcttcgcctttacgccccttccgggaccgctt
cccggggcgacagttgcccagccctacgatcagacgatttcggcgaccagtggaaccggg
ccttacagctacgcgatcaccggttcgcagccgcctggcctgacgctcgcggccaacggc
cgcctgtcgggcacaccgacggtggacggcaacttcaacttcacgatcgaggcgaccgac
gcgaacagcgcgaccggctctgtcacctatagcttggcagtggcggttgaggcgccgtcg
gccggtgcggttgcgcttacggttgccgcaaactcggcggcaaacgtcatctcgcccagc
atttcgggcggtgcagccgcatcgctcgcgatcgcaagcccgccgtcgcgcggcaatgcg
tcggtgtccggcttgcagatcctctatacaccccaacccggctattccggcgccgacagc
ttcacctacacggcgacgaatgcgactggcacatccacgccggcaaccgtcacggtgacg
gtctcgccgccggtgctcgtcctttctccgaccggtggcacgcttgcggccgccgtcgcc
ggggtttcctatagccagagcctgacggccagcgccggcacggcaccctatctgtatcag
gttacatccggggcattgccgggcgggctgacgctcgatccagtcagcggcgcgatctcc
gggcgaccgggcgccgacagcgacttcgccttcacggtgacggcgacggacgccaacggg
gcgacggggcaggcgagctatcgcattgccgtcgtctcggccaacatcgtcttcagcccg
gcggccggcagccttccggatgccatggtcggtgaggcctattccgcgccgatttccgca
agcggcggcaccggcgccctgatttacagcgtcaagagcggcactttgccaaagggcatg
gtgctcaatgtctcgaccggcgaactgaccgggccgctggccgcggatgcggtgcccgac
acctatcgcttcaccattggcgtcgtcgacagccgtggcgccagcggttcggcggcctat
acgctcaaactcaacccgcgtgcggtgacggcgcccagcatcgtcgtcgacgtgcccgcg
ggcacgacaccgaacaacatctatctcaacgccggtgccaccggcggtccgttcaccagt
gccgccgtcgcctcggtctcgccgccgatcgctggcacagccgagatcatcgagggcgag
cttgcagccgccggcagctttacgccggtcggctattatctaaagttcacgcccaatccg
tcctattccggttcggcggtggttagctacaccttgagaagcgcactcggtacgtcgggt
gctggaactgtcacttacaagatcgcactggaccgtgtcgcagccggggaagagatcgac
ggcctggtgcgcgatttcgtgcgcaaccggcagagcctgctgtcgtcgacggtcaaggtt
ccggggctgatcgagcggcgacgggcggcgatgagcaccgatccggtgacgacggcggtc
acaccatcggagaatggcgcgcgccttgggttttccaccagcctcacgcagatccaggcg
gcgcgcgacgcagccgacgcggcggctgccggccaaaccttcgtgaagaccgaccagccc
ttcgacgtctggatggatggcagctttctgttccacaaggacaaggacgacgatagtgac
aagtggggcaacttcgccctgttttcgatcggcgccgattacctgatcagcgagcgggcg
ctggtcggcctgtcgttccactacgactacacgagcgacccgaccgacgaggacgccgaa
ctgaccggcaatggctggcttgccggtccctatgcgtcgttcgaaatcggacaaggtgtg
ttcctcgatgccaacctgctctatggcggctcctcgaacgacatcgataccggtatcttc
accggcacctttgacacgacccgctggatggcggacgtcaagctgaccggcgagtggcag
ctcgacgagatcacggtgctcaccccgaagctcagggccgtctacttcaacgaagaggtc
gacgattacaccgccaggaacgcgctcggagagacgatcgacctcaaggggttcatcgag
gagcaagcccgcttcagcatcggtcttgatgtcgagcggacgctggaactggaaaacggc
ctgatcctgtcgccgacggtcggcgccgatgtcggctttgcgtcgctcgatggcgaaggc
ctgtttggccgggtctcggccgggctcgcgctcagcaacaacgacaactggggcctcgac
ttctcgctgctcttcaacatcgagggcgacggttcgcaggcggctggtgcgaaagtcggt
gcgcgcgtccggttctga
DBGET
integrated database retrieval system