Equus asinus (ass): 106842861
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Entry
106842861 CDS
T04645
Symbol
SCN10A
Name
(RefSeq) sodium channel protein type 10 subunit alpha
KO
K04842
voltage-gated sodium channel type X alpha
Organism
eai
Equus asinus (ass)
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
eai04040
]
106842861 (SCN10A)
Ion channels [BR:
eai04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
106842861 (SCN10A)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
GPHH
Na_trans_cytopl
CcmD_alt
IQ
Motif
Other DBs
NCBI-GeneID:
106842861
NCBI-ProteinID:
XP_044610870
LinkDB
All DBs
Position
21:complement(50247857..50338368)
Genome browser
AA seq
1971 aa
AA seq
DB search
MEFPFGSLGTNNFRRFTPESLAETEKRIAAKQAAEKAKDKHREQKDPEEKPRPQLDLKAC
NKLPKFYGELPPELVGEPLEDLDPFYSTHRTFMVLNKGRTISRFSATRALWLFSPFNLIR
KTAIKVSVHSYPLHGLLRWFSLFIMVTIVINCVFMTQTEFPERLEYIFTVIYTFEALIKI
LARGFCLNEFAYMRDLWNWLDFSVITLAYLGEVMDLRGISGLRTFRVLRALKTVSVIPGL
KVIVGALIHSVKKLTDVTILTVFCLSVFALVGLQLFKGNLKNKCVKDCTTLNETANYSSY
EKLQSNFCHTDKDFYFIKQGTSDPLLCGNGSDAGHCPKGYLCLKTSDNPDFNYTSFDSFA
WAFLSLFRLMTQDSWERLYQQTLRVSGKTYMVFFVIVIFLGSFYLVNLILAVVTMAYEEQ
NQATIDEIEAKEKTFQEALERLRKEQEMLAALGIDTASLHSYNASPLASKNANDRRHRMK
PRVSENSTDDNKSPQSEPYNQRRMSFLGLTSGRRRASHGSVFHVRAPAQDVSFPDGVIDD
GAFPEGSESPRGSLLLNRGASQQGPLPTSPLPQPPNPGSGGEDGHPTLPTGELAPGAIEV
PALDAGQKKTFLSAEYLNEPFRVRRAMSVVSIMTSVLEELEESEQRCPPCLTRLAQKYLI
WECCPTWVKLKTFLFEIVTDPFAELTITLCIVVNTVFMAMEHHGMSSTFEAMLQIGNIVF
TVFFTAEMVLKIIALDPYYYFQKRWNIFDCIIVTVSLMELGAAKKGSMSVLRTFRLLRVF
KLAKSWPTLNTLIKIIGNSVGALGNLTIILAIIVFVFALVGKQLLGDSYCDKRRIISAPN
EEWPRWHMYDFFHSFLIVFRILCGEWIENMWACMEVGQKSICLILFLSVMLLGNLVVLNL
FIALLLNSFSADNLTAPEDDGEVNNLQAALARIQAFGRRTRKALCSFFSRPCLLSRFKAE
PQLVVKLPLSSPKAESHIAANTAMGSPAGVPALTGPRDDHSDFITNPNVWVSVPIAEGES
DLEDLEEDGEEDARSSGEEASPQGQEQLQQVGQCEDHLAPRSPGSGMSSEDLAPYLGEKW
KDEAAAQAAAEGVDDTSSSEGSTVDFPDPEEILRKIPELADDLEEPDDCFTEGCIRHCPC
CKVNTSKSPWATGWQVRKACYRIVEHSWFESFIIFMILLSSGSLAFEDYYLDQKPTVKAM
LEYTDRVFTFIFVFEMLLKWVAYGFKNYFTNAWCWLDFLIVNISLTSLIAKILQYSDMAS
IKALRTLRALRPLRALSRFEGMRVVVDALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAG
KFKKCINTTNEEFSLVPLSIVNNKSDCERQNYTGNFFWVNVKVNFDNVAMGYLALLQVAT
FKGWMDIMYAAVDSREENLQPKWEDNVYMYLYFVIFIIFGGFFTLNLFVGVIIDNFNQQK
KKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTRQTFDIVIMVL
ICLNMITMMVETDEQSEEKTRVLNKINQFFVAVFTGECVMKMFALRHYYFTNGWNVFDFI
VVVLSIGSLMFSAILTSLGNFLSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSLP
ALFNIGLLLFLVMFIYSIFGMSSFPHVKWEAGIDDMFNFQTFANSMLCLFQITTSAGWDG
LLSPILNTGPPYCDPNLPNSNGSQGNCGSPAMGILFFTSYLIISFLIVVNMYIAVILENF
NVATEESTEPLSEDDFDMFYKTWEQFDPEATQFITFSALSDFADTLSGPLRIPKPNRNIL
IQMDLPLVPGDKIHCLDILFAFTKNVLGESGELDSLKANMEEKFMATNLSKASYEPIATT
LRWKQEDISATVIQKAYRSYVLHRSMTISNAQGVPRAEEEAVSLPDEGFVAFLANENCVL
PDKSETASATSFPPSYDSVTRGLSDQVNMSTSNSLQNGDETASKEATAPGP
NT seq
5916 nt
NT seq
+upstream
nt +downstream
nt
atggaattcccctttgggtccctgggaactaacaacttccgtcgattcactccggagtcc
ctggcggagactgaaaagcgaattgctgccaagcaggcagcagagaaagccaaggataag
cacagggagcagaaggacccagaagagaagcctcggccccagctagacttgaaagcctgc
aacaagctgcccaagttctatggtgagctcccgccagagctggttggggagccgctggag
gatctggaccccttctacagcacacaccggacatttatggtgctgaacaaagggaggacc
atttcccggtttagtgccactcgggccctgtggttattcagtcctttcaacctgatcaga
aaaacagccatcaaagtgtctgtccactcatatcctttgcacggccttctcaggtggttc
agtttatttatcatggtcacgattgtgatcaattgtgtgttcatgacccaaactgaattt
ccagagagactcgagtatatcttcactgtcatttacacctttgaagccttgatcaagata
ctggcaagaggattttgtctaaatgagtttgcgtacatgcgagatctgtggaactggctg
gattttagcgtcattactctggcataccttggtgaagtgatggatctccgagggatctca
ggcctgcggacgttcagagttcttagagctttaaaaacagtttctgtgatcccggggctg
aaggtcatcgtgggggccctgatccactcggtgaaaaagctgactgatgtgaccatcctc
accgtcttctgcctgagtgtctttgccctggtgggcctgcagctcttcaagggcaacctc
aagaacaaatgtgtcaaagattgcacaactctcaacgagacggccaattactcctcttac
gaaaaactccagtcgaatttctgccatacggacaaagatttctacttcattaagcagggc
acttctgatcccttactgtgtggcaatggatctgatgcaggccactgtcctaaaggttat
ctctgccttaaaacatctgacaacccggattttaactacaccagctttgattcctttgcc
tgggctttcctctcactgtttcgcctcatgacacaggattcatgggaacgcctctaccag
cagaccctgagggtgtctgggaaaacatatatggtcttttttgtgatcgtcatcttcctg
gggtctttctacctggtcaacctgatcttggctgtggtcaccatggcatatgaggagcag
aaccaggcaactattgatgaaattgaagccaaggagaagacattccaggaggcccttgag
aggctccggaaggagcaggagatgctggcagcactggggattgacacagcctctctccac
tcctacaatgcatcacctttagcctccaaaaatgccaatgacagaaggcacagaatgaag
ccaagggtgtcagagaactccacagatgacaacaaatcgccccaatctgagccttacaac
cagcgcaggatgtctttcctaggcctcacctctggaagacgccgggctagccatggcagt
gtgttccatgtccgggcccctgcccaagacgtctcattccctgatggggtcatcgatgat
ggagcctttcctgaaggcagtgaaagccctcggggatccctgttgctgaatagaggtgcc
agccagcaagggcccctccccacgagtccgctgcctcaaccccccaaccctggttcaggt
ggagaagatggacaccccacattgcccactggtgagctcgcccctggagccatcgaagtt
ccggcacttgatgcaggacagaagaagacttttttatcagcagaatacttgaatgaacct
ttccgagtccgaagggcaatgagcgttgtcagtatcatgacctctgtccttgaggaactc
gaggagtctgagcagagatgcccaccctgcctgaccagattggctcagaagtatctgatc
tgggagtgctgccccacatgggtgaagctcaagacatttctcttcgagattgtgacggac
ccctttgcagagctcaccatcaccttgtgcatcgtggtgaacaccgtctttatggccatg
gagcaccacggcatgagttccaccttcgaagccatgctccagataggcaacatcgtcttt
actgtgttttttactgctgaaatggtcttgaaaatcattgctttggacccctactattac
ttccagaagaggtggaacatctttgactgcatcatcgtcactgtgagcctgatggagctg
ggcgcagccaagaagggaagcatgtcagtgctgcggacctttcgcctgctgcgggtcttc
aagctggccaagtcctggccaaccttaaacacgctcatcaagatcatcggaaactcagtg
ggggctctggggaacctcactatcatcctggccattattgtctttgtcttcgctctggtt
ggcaagcagctcctcggggacagctactgtgacaagaggcgcattatctctgcacccaat
gaggaatggccacgctggcacatgtatgacttcttccactccttccttatcgtcttccgc
atcctctgtggagagtggattgagaacatgtgggcctgcatggaagtcggccagaaatcc
atatgcctcatccttttcctgtcggtgatgctgctggggaacctggtggtgctcaacttg
ttcattgccctgctgctgaactccttcagcgctgacaacctcacggccccagaggacgac
ggggaggtgaacaacctgcaggcggccctggcacggatccaggcgtttggccgtcgcacc
aggaaggccctttgcagcttcttcagcaggccctgcctgctctcccggttcaaggcagag
ccccagctcgtggtgaaactcccactgtccagccccaaagccgagagccacattgctgcc
aacacagccatggggagccctgcaggggtcccggctctcacaggccccagggatgaccac
agtgacttcatcaccaatcctaatgtgtgggtctctgtgcccattgccgagggtgaatct
gacctggaggacttggaggaggatggtgaggaggatgctcggagctccggggaggaagcg
agcccccaagggcaggagcagttgcagcaagtcgggcagtgtgaggaccacctggcaccc
aggagcccaggctctggaatgtcctctgaggacctggctccctacctgggtgagaagtgg
aaagacgaggctgctgctcaggccgctgcagagggagtggatgacacgagctcctcagaa
ggcagcacagtggacttcccagaccctgaggagatcctgaggaagatccctgagctggcg
gatgaccttgaagagccagatgactgcttcacagaaggctgcattcgccactgtccctgc
tgcaaagtgaacacctccaagtctccatgggccaccggctggcaggtgcgcaaggcctgc
taccgcatcgtggagcacagctggtttgagagcttcatcatcttcatgatcctgctcagc
agtgggtctctggcctttgaagactattaccttgaccagaagcccacggtgaaggccatg
ctggagtacacggacagggtgttcacatttatctttgtgtttgagatgctgctcaagtgg
gtggcctatggcttcaaaaattacttcaccaatgcctggtgttggctggacttcctcatt
gtgaacatctcactgacaagccttatagcgaagatcctgcagtattccgatatggcatcc
atcaaagcccttcggaccctccgtgccctgcggccactgcgtgctctgtctcgatttgaa
ggcatgcgggtggtggtggatgccctgctgggcgccatcccatccatcatgaacgtcctc
ctcgtctgcctcatcttctggctcatcttcagcatcatgggcgtgaacctctttgcaggg
aagtttaagaagtgcatcaacaccaccaatgaagaattttctcttgtgcctttgtctatc
gtgaataacaaatctgactgtgaacgtcaaaactacactggcaacttcttttgggtcaat
gtgaaggtcaactttgataatgttgcaatgggttaccttgcacttctgcaggtggcaacc
tttaaaggctggatggacatcatgtatgcagctgttgattcccgggaggagaacctgcag
cccaagtgggaggacaatgtgtacatgtacttgtacttcgtcatcttcatcatcttcggc
ggcttcttcaccctcaatctcttcgttggggtcataattgacaacttcaatcaacagaaa
aaaaagttagggggtcaggacatcttcatgacagaggagcaaaagaagtactacaacgcc
atgaagaagctgggctccaagaagccacagaagcccatcccacggcccctgaacaagtac
cagggcttcgtctttgacatcgtgaccagacaaacttttgacattgtcatcatggtcctc
atctgcctcaacatgatcaccatgatggtggagactgatgagcagagtgaagaaaagaca
agagtccttaacaaaatcaaccagttctttgtggccgtcttcacgggcgagtgtgtcatg
aagatgtttgccttgaggcattactacttcaccaatggctggaatgtgtttgacttcatt
gttgtagtcctctccattgggagcctgatgttttctgcaattcttacgtcacttggaaat
ttcttatccccaacactcttccgagtcatccgcctggcacgaattggccgcatcctcagg
ctgatccgagcagccaagggaatccgcacgctgctctttgccctcatgatgtccctgcct
gccctcttcaacattggcctgctgctcttcctcgtcatgttcatctactccatctttgga
atgtccagcttcccccatgtcaagtgggaggctggcatcgatgacatgttcaacttccag
acctttgccaacagcatgctctgcctcttccagatcaccacgtcagctggctgggatggt
ctcctcagccccatcctcaacacggggcccccctattgcgacccaaatctgcccaacagc
aatggctcccaggggaactgtgggagcccagccatgggcatcctcttcttcacctcctac
ctcatcatctccttcctcatcgttgtcaacatgtacattgcagtgatcttggagaacttc
aatgtggccacagaggagagcactgagccccttagtgaggacgactttgacatgttctat
aagacttgggagcagttcgacccagaggccacccagtttattaccttttctgccctctca
gattttgcagacaccctctctggccccctgcgaatcccaaaacccaatcggaatatatta
atccagatggacctgcccttggtccctggggataagatccactgtttggacatccttttt
gcctttaccaagaacgttctgggagaatctggggagttggattctctgaaggcaaatatg
gaggagaagttcatggcaactaatctttcaaaagcatcctatgaaccaatagcaaccacc
ctccgatggaagcaagaagacatttcagccactgttattcaaaaggcctatcggagctat
gtgctacaccgctccatgacaatctccaatgcccagggtgtgcccagggctgaggaggag
gctgtgtcactcccagatgaaggctttgttgcgttcttggcaaacgaaaattgtgtgctc
ccagacaaatctgaaactgcatctgccacatctttcccgccatcttatgacagtgtcact
agaggtcttagtgatcaagtcaacatgagcacatctaactcattacaaaatggggatgaa
actgccagtaaggaagccactgcccctgggccctag
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