Equus asinus (ass): 106842954
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Entry
106842954 CDS
T04645
Symbol
COL18A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XVIII) chain
KO
K06823
collagen type XVIII alpha
Organism
eai
Equus asinus (ass)
Pathway
eai04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
106842954 (COL18A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
eai04147
]
106842954 (COL18A1)
00535 Proteoglycans [BR:
eai00535
]
106842954 (COL18A1)
00536 Glycosaminoglycan binding proteins [BR:
eai00536
]
106842954 (COL18A1)
Exosome [BR:
eai04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106842954 (COL18A1)
Proteoglycans [BR:
eai00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
106842954 (COL18A1)
Glycosaminoglycan binding proteins [BR:
eai00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106842954 (COL18A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Endostatin
Collagen
DUF959
Collagen_trimer
Fz
Laminin_G_3
DUF1554
LDL
Motif
Other DBs
NCBI-GeneID:
106842954
NCBI-ProteinID:
XP_014715252
LinkDB
All DBs
Position
18:complement(7211228..7268838)
Genome browser
AA seq
1751 aa
AA seq
DB search
MAPHPSSRLRLLLLLCCLGAARAQLLSLLWPWSTGTKGPSAPPVSVPRGSPSVQSTEDTT
THVAHQDGPTEQGTAPTSRELPPERLEAGLGRASAAPTASTESPENIAGVGAEILNVAMG
IRNFVQLWDNTTPAESSTRAGTAAPATPTDLLTLPGPSSASQENGTVLWPSSGAPSSPVT
QRTETGTSPVPTQPPPSPGTPQALLREPSLPPPSPGRALSSTLGGAPLWGSRPSPGQPQD
LDGEELLPVAARPGQQHRHADVGRHSLHLLPLVTGSLGTALSALSSDSPTELSQIALSAL
IGDSGAWIPHVANSVGPGLANNSSLLGADPLTPAGQPVHNAAGRCLPLPPSLPVCSRLGI
GRSWLPNHLHHVRSEEVQAAARAWGGLLRTHCHRFLAWFFCLLLAPPCGPPPAPPPCRQF
CEVLEDACWSHLDGGGLPVSCASLPAQEDGYCVFIGPAAESVRTEVGLLQLLGDPPPPQV
SRVDDPDVGPAYVFGPDASGGQAARDLFPSRFFRDFSLLLHVRPDTAGAGVLFALTDAAQ
AVVSLGVKLAAVRDGHQDVQLLHSEPGAARTRVAAAFRLPAFAGQWARLALSVDGAAAAL
FVDCEEVQRVPLARAARGLELEPGARVFVAQAGRADPDKFQGMIAELRVRADPHVSPVHC
LEDDDDDDDGASGDFGSGLEEPRERLGEEPGTSLTLGLPDAPPVTSPPLAGSSDVEDSRT
EEIEEETTVSSIGAHTLPGSDPAATWDGSAWSPGGSLREGGLKGQKGEPGLPGPVGPQGP
AGPAMHSPDAQPIPGPQGPPGPPGPPGKDGAPGRDGEPGDPGEDGKPGDTGPQGFPGTPG
DVGPKGEKGDPGVGPRGPPGPQGPPGPPGPSFRPDKLTFIDMEGSGFGGDLETLRGPRGF
PGPPGPPGVPGLPGEPGRFGMNSSDVPGPAGLPGVPGRQGPPGLPGPPGPPGPPGRDGRP
GGTGQKGSLGEAGPPGPKGSKGDPGPIGAPGENGLAGPPGPAGPPGPPGPPGLPGPPGPG
LAAGFDDMEGSGGPFWSTARGADGPQGLPGLPGVKGDPGPAGPPGTKGEVGADGGPGFPG
LPGREGAAGAQGPKGEKGTQGEKGDPGKDGVGQPGLPGPPGPPGPVVYVSEQDRAVASVP
GPEGRPGFAGFPGPAGPKGDLGSKGQQGLPGPKGEKGEPGAVFGPDGGVLTASQKGAKGE
PGFRGPPGPYGRPGHKGEIGFPGRPGRPGMNGLKGEKGEPGDASVRFGMRGLPGPPGPPG
PPGLPGTPVYDTNAFLESGRPGPPGLPGHQGPSGPKGDKGEVGPPGPPGQFPLDLLQLEA
EMKGEKGDRGPAGQKGERGEPGAGGFFGSSVPGPPGPPGYPGIPGPKGESIRGQPGPPGP
QGPPGIGYEGRQGPPGPPGPPGPPGPPSFPGPYRQTISVPGPPGPPGPPGPPGTMGTSSG
VRIWATYQTMLDKVPEVPEGWLIFVAEREELYVRVRNGFRRVLLDARMPLPHGTDNEVAA
LQPPVVQLHEGNPYPRREVPHSTARPWRADDILASPPRLPDPQPYPGAPHHGSYVHLRPA
RPTSSLTHTHQDFQPVLHLIALNSPQSGGLRGIRGADFQCFQQARAVGLAGTFRAFLSSR
LQDLYSIVRRADRASVPIVNLRDEVLFPNWEALFTGSEGRLKPGARIFSFDGRDVLQHPA
WPQKSVWHGSDPSGRRLTESYCETWRTEATAATGQASSLLAGRLLEQKSASCHNAFIVLC
IENSFMTSSSK
NT seq
5256 nt
NT seq
+upstream
nt +downstream
nt
atggctccccaccccagcagccgcctccgcctgctgctgctgctttgctgtctcggggcc
gcccgggctcaactgctgagcctcctctggccgtggtccactgggaccaaagggccctca
gccccgccggtctccgtgccccggggcagcccatctgtgcaatccacagaggacaccacc
acgcacgtggcccaccaggatggccccaccgagcaggggacagctcccaccagccgtgag
ctgcccccggagaggctggaggctggcctgggccgggcctccgctgcccccacggcctcc
accgagagcccagagaacatcgccggcgtcggggccgagatcctgaacgtggctatgggc
atccggaactttgtccagctgtgggacaacaccacccccgccgagagctccaccagggcg
gggacggcagcccctgcgacccccacggacctcctcaccctccctgggccttccagcgcc
tctcaggagaacgggaccgtgctctggccaagtagcggggccccaagctctcctgtcacc
cagaggaccgagaccggcacctcgccagtgcccacccagccgcctccctcccctggcacg
ccccaggcactgctcagggagccctcgctgccgccaccgtccccaggtagagctctctcc
tccacgctgggcggggcccctctctggggaagccggccgtccccagggcagccgcaggat
ctggatggtgaagaactcttgcccgtggcagcccgtcccggccagcagcaccgacacgct
gacgtcggcaggcactcgctccatctgctccccctggtgacgggttcgctgggcactgcc
ctctcggctctctcctctgactcccccactgagctgtctcaaatcgcactctcagcttta
attggggacagtggtgcttggattccccacgtggctaattctgtgggacctggtcttgct
aataactcctcgctgctcggggctgacccactgacccctgccgggcagcctgtccacaat
gccgctggccgctgcctgcccctgccgccctccctgcccgtctgcagccgcctgggcatc
gggcgctcctggctgcccaaccacctccaccatgtgcgcagtgaggaggtgcaggccgcc
gcgcgggcctgggggggcctcctgcggacccactgccaccgcttcctcgcctggttcttc
tgcctgctgctggcccccccctgcggcccgccccccgccccaccgccctgccgccagttc
tgtgaggtcctggaggacgcgtgctggagccacctggacgggggcgggctgccggtcagc
tgtgcctcactccctgcccaggaggatgggtactgtgtgttcattgggccggctgcagag
agcgtgcgcacggaggtggggctcctgcagctgctcggcgaccccccgcccccgcaggtc
tcccgggtggacgaccccgacgtcgggccggcctacgtcttcggcccggatgccagcggc
ggccaggcggcgcgggacctcttcccgagccggttcttccgtgacttctcgctgctgctc
cacgtgcgcccggacacggcgggcgcgggcgtgctcttcgccctcacggacgcggcgcag
gccgtggtctcgctgggcgtgaagctggcggccgtgcgcgacggccaccaggacgtgcag
ctgctccactcagagccgggcgcggcccgcacacgcgtggccgccgccttccgcctgccc
gccttcgccggccagtgggcgcgcctggcgctcagcgtggacggtgcggccgccgcgctc
ttcgtggactgcgaggaggtgcagcgcgtgcccctggcgcgggccgcgcgcggcctggag
ctggagcccggcgcccgcgtcttcgtggctcaggccggacgagcggaccccgacaagttc
caggggatgatcgcggagctgagagtgcgcgcggacccccacgtgagccccgtgcactgt
ctggaggacgacgatgacgatgacgatggggcgtccggagacttcggcagcgggctcgag
gagccccgggagcgtctcggggaggaaccgggcacgtccctgacacttggcctccccgac
gctcccccagtcacctcaccacccttggctggaagcagcgacgtggaagattccagaact
gaagaaattgaggaagaaaccactgtgtcttcaataggagctcacaccctccccggctcg
gatccggccgccacgtgggacggcagtgcctggagtcctgggggcagcctgcgagaggga
ggcctcaaggggcagaagggggagcctggcctgcctggtccagtcggtccccagggtcct
gcaggcccggccatgcacagccctgatgcacagcctatccctgggccacagggacccccg
gggcccccagggcccccagggaaggatggtgcccccggaagggacggtgaaccgggggat
cccggtgaagatggcaaacctggcgacactgggccgcagggcttcccggggaccccagga
gacgtgggccccaagggtgagaagggggatcctggggttgggccaagaggacccccagga
ccccaagggcctccaggaccaccaggaccctcattcagacctgacaagctgaccttcatt
gacatggaggggtccggcttcggcggcgacctggagaccctccggggcccacgaggcttc
cccggcccccccgggcctcctggcgtcccaggcctgcctggagagccaggccgcttcggt
atgaacagctcagacgtcccaggacctgcaggcctccccggcgtgcctgggcgccagggg
ccccccgggctccccggacccccgggacccccagggcctccaggaagagacgggcggcca
ggagggaccggccagaaaggcagcctcggtgaagccggccccccaggacctaagggaagc
aagggagaccccggccccattggcgctcctggcgagaatggcttggcaggaccccccgga
ccagctgggccgccggggcctccagggccccccgggctccccgggcccccgggaccagga
ctcgccgcagggtttgatgacatggaaggctccgggggacccttctggtcgacagcgcga
ggtgctgacgggccacagggactgcccggcctgcctggagtcaagggggatcctggacca
gctgggccaccgggcaccaagggagaagtcggagcagatggaggtcccgggttccccggc
ctccccggcagagagggcgcggctggagcccaggggccaaaaggagaaaaagggacccag
ggagagaaaggcgacccagggaaggacggagtggggcagccaggcctccctggaccccct
ggacccccagggcctgttgtctacgtgtcggagcaggacagagcagtggccagtgtgccg
ggacccgagggccgccccgggttcgctggctttcccggaccagccgggccgaagggagac
ctgggctccaaaggccagcagggcctcccaggacccaagggcgagaagggtgagccgggt
gcagtctttggccccgatggcggagtgctgaccgcctcccagaaaggagccaagggtgag
cccggcttccgaggacccccggggccatacggacggcctggacacaagggagagattggc
ttccctggacggccgggtcgccccgggatgaacggcttgaaaggggagaaaggggagccg
ggagacgccagcgtcaggtttggtatgaggggtctgcctggccccccggggcccccaggg
cccccaggccttcctgggactcctgtctacgacacgaacgcgtttttggagtctggccgc
cctggacctccaggattgccagggcaccagggaccttctggaccgaagggtgacaaagga
gaagtgggtccccctggaccacccgggcagttcccgttggacctcctccagctggaggct
gaaatgaagggggagaagggtgaccgagggcctgccgggcagaaaggtgaaaggggcgag
cccggagctggcggattcttcggctccagtgtgcccggcccccccggcccaccgggctac
cctgggattccgggtcctaagggagagagcatccgaggacagcctggcccacctggacct
cagggaccccctggcatcggctatgaaggacgccaggggcctcccggaccccctggtccc
ccaggccccccagggcccccttcctttcctggcccttacaggcagaccatcagcgttcca
ggccctccaggcccgcctgggcccccaggaccccccggcaccatgggcacctcctcaggg
gtgaggatctgggccacgtaccagaccatgctggacaaggtgcccgaggtgccggagggc
tggctcatcttcgtagccgagagggaggagctgtacgtccgcgtccggaacgggttccgg
agggtgctgctggacgcccggatgcccctcccccacgggacggacaacgaagtggccgcc
ttacagccccccgtggtgcagctccatgagggcaacccatacccccggcgggaggttccc
cactccactgcacgaccctggcgggcggacgacatcctggccagccccccacgtctgccg
gacccccagccctaccctggagccccgcaccacggctcctatgtgcacctccggccggcg
cgccccaccagctcactcacccacacccaccaggacttccagccggtgctccacctgatc
gcactcaacagcccgcagtcgggcggcttgcgcggcatccgcggcgcagacttccagtgc
ttccagcaggcgcgcgccgtggggctggccggcaccttccgcgccttcctgtcctcgcgg
ctgcaggacctctacagcatcgtgcgccgcgctgaccgcgccagtgtgcccatcgtcaac
ctcagggacgaggtgctgttccccaactgggaggccttgttcacgggctccgagggccgg
ctgaagcccggggcccgcatcttctctttcgatggcagagacgtcctgcagcaccccgcc
tggccccagaagagcgtgtggcacggctcggacccaagtgggcgccggctgactgagagc
tactgcgagacgtggcggaccgaggccacggcggccacaggccaggcatcctcgctgctg
gcgggccggctgctggagcagaaatccgccagctgccacaacgccttcatcgtcctctgc
atcgagaacagcttcatgacctcctcctccaagtag
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